RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 CCDC17Q96LX7 622 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 DEFB129Q9H1M3 183 aa15.3■□□□□ 0.04
TRIM47-202ENST00000585333 DDX4Q9NQI0 724 aaKnown RBP15.3■□□□□ 0.04
TRIM47-202ENST00000585333 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
TRIM47-202ENST00000585333 SHTN1A0MZ66 631 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 ORC4O43929 436 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 ST18O60284 1047 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 BLOC1S2Q6QNY1 142 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 C16orf86Q6ZW13 317 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 CDC37L1Q7L3B6 337 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 ZNF444Q8N0Y2 327 aaPredicted RBP15.29■□□□□ 0.04
TRIM47-202ENST00000585333 NEK1Q96PY6 1258 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 TOMM22Q9NS69 142 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 GINM1Q9NU53 330 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
TRIM47-202ENST00000585333 PALD1Q9ULE6 856 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 PCDHAC2Q9Y5I4 1007 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 SNX14Q9Y5W7 946 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 MYH1P12882 1939 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 CDK5RAP2Q96SN8 1893 aa15.29■□□□□ 0.04
TRIM47-202ENST00000585333 ERICH2A1L162 156 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 E7EWF7 191 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 FGRP09769 529 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 MCM5P33992 734 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 MCM2P49736 904 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 CACNB3P54284 484 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 HAND2P61296 217 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 ANKRD1Q15327 319 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 KRT26Q7Z3Y9 468 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 METTL16Q86W50 562 aaKnown RBP15.28■□□□□ 0.04
TRIM47-202ENST00000585333 IQCA1Q86XH1 822 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 GPBP1L1Q9HC44 474 aaPredicted RBP15.28■□□□□ 0.04
TRIM47-202ENST00000585333 CLEC11AQ9Y240 323 aa15.28■□□□□ 0.04
TRIM47-202ENST00000585333 CNTNAP1P78357 1384 aa15.27■□□□□ 0.04
TRIM47-202ENST00000585333 EGFRP00533 1210 aa15.27■□□□□ 0.04
TRIM47-202ENST00000585333 HIRAP54198 1017 aaPredicted RBP15.27■□□□□ 0.04
TRIM47-202ENST00000585333 CHMP4CQ96CF2 233 aa15.27■□□□□ 0.04
TRIM47-202ENST00000585333 JAKMIP1Q96N16 626 aaKnown RBP15.27■□□□□ 0.04
TRIM47-202ENST00000585333 RRAGCQ9HB90 399 aa15.27■□□□□ 0.04
TRIM47-202ENST00000585333 BAZ2AQ9UIF9 1905 aaKnown RBP15.26■□□□□ 0.03
TRIM47-202ENST00000585333 CASTP20810 708 aaKnown RBP15.26■□□□□ 0.03
TRIM47-202ENST00000585333 FGD1P98174 961 aa15.26■□□□□ 0.03
TRIM47-202ENST00000585333 GABPAQ06546 454 aa15.26■□□□□ 0.03
TRIM47-202ENST00000585333 DHX32Q7L7V1 743 aaKnown RBP15.26■□□□□ 0.03
TRIM47-202ENST00000585333 TMTC2Q8N394 836 aa15.26■□□□□ 0.03
TRIM47-202ENST00000585333 TMEM87BQ96K49 555 aa15.26■□□□□ 0.03
TRIM47-202ENST00000585333 UBAC1Q9BSL1 405 aa15.26■□□□□ 0.03
TRIM47-202ENST00000585333 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRIM47-202ENST00000585333 TSPY2A6NKD2 308 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 POTECB2RU33 542 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 PPP1R12BO60237 982 aaPredicted RBP15.25■□□□□ 0.03
TRIM47-202ENST00000585333 CDK8P49336 464 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 PLCD1P51178 756 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 C1QTNF8P60827 252 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 CTDSPL2Q05D32 466 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 RUFY3Q7L099 469 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 TBC1D10CQ8IV04 446 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 ZNF341Q9BYN7 854 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 TMEM39BQ9GZU3 492 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 ZSWIM6Q9HCJ5 1215 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 CABP5Q9NP86 173 aa15.25■□□□□ 0.03
TRIM47-202ENST00000585333 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.25■□□□□ 0.03
TRIM47-202ENST00000585333 DDTLA6NHG4 134 aaPredicted RBP15.24■□□□□ 0.03
TRIM47-202ENST00000585333 UNCXA6NJT0 531 aa15.24■□□□□ 0.03
TRIM47-202ENST00000585333 RANBP6O60518 1105 aaKnown RBP15.24■□□□□ 0.03
TRIM47-202ENST00000585333 TSPY3P0CV98 308 aa15.24■□□□□ 0.03
TRIM47-202ENST00000585333 TSPY8P0CW00 308 aa15.24■□□□□ 0.03
TRIM47-202ENST00000585333 ANP32AP39687 249 aaKnown RBP15.24■□□□□ 0.03
TRIM47-202ENST00000585333 MAP3K10Q02779 954 aa15.24■□□□□ 0.03
TRIM47-202ENST00000585333 RRP12Q5JTH9 1297 aaKnown RBP15.24■□□□□ 0.03
TRIM47-202ENST00000585333 RASEFQ8IZ41 740 aa15.24■□□□□ 0.03
TRIM47-202ENST00000585333 ALDH8A1Q9H2A2 487 aaPredicted RBP15.24■□□□□ 0.03
TRIM47-202ENST00000585333 CYP2D6P10635 497 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 RPS6KB1P23443 525 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 FKBP1BP68106 108 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 CERKLQ49MI3 558 aaPredicted RBP15.23■□□□□ 0.03
TRIM47-202ENST00000585333 TATDN1Q6P1N9 297 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 FBXL16Q8N461 479 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 TEPSINQ96N21 525 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 TBC1D2Q9BYX2 928 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 TCP11L1Q9NUJ3 509 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 PLIN4Q96Q06 1357 aa15.23■□□□□ 0.03
TRIM47-202ENST00000585333 CYP2D7A0A087X1C5 515 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 KDM4AO75164 1064 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 IREB2P48200 963 aaKnown RBP15.22■□□□□ 0.03
TRIM47-202ENST00000585333 NEK4P51957 841 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 BECN1Q14457 450 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 CHADLQ6NUI6 762 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 TMEM179Q6ZVK1 233 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 SH3BP5LQ7L8J4 393 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 USP48Q86UV5 1035 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 ZFPM1Q8IX07 1006 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 MB21D2Q8IYB1 491 aaPredicted RBP15.22■□□□□ 0.03
TRIM47-202ENST00000585333 TTC14Q96N46 770 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 NBPF3Q9H094 633 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 NMRK2Q9NPI5 230 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 PDRG1Q9NUG6 133 aa15.22■□□□□ 0.03
TRIM47-202ENST00000585333 SYNPO2Q9UMS6 1093 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms