RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ZSWIM8A7E2V4 1837 aa13.21□□□□□ -0.29
CSNK1D-226ENST00000585026 SRGAP3O43295 1099 aa13.21□□□□□ -0.29
CSNK1D-226ENST00000585026 SPP2Q13103 211 aa13.21□□□□□ -0.29
CSNK1D-226ENST00000585026 ANKLE1Q8NAG6 615 aa13.21□□□□□ -0.29
CSNK1D-226ENST00000585026 CRISPLD2Q9H0B8 497 aa13.21□□□□□ -0.29
CSNK1D-226ENST00000585026 PRO3102Q9H379 93 aa13.21□□□□□ -0.29
CSNK1D-226ENST00000585026 HERC5Q9UII4 1024 aaKnown RBP13.21□□□□□ -0.29
CSNK1D-226ENST00000585026 USP17L5A8MUK1 530 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 HMGCRP04035 888 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 UQCRFS1P1P0C7P4 283 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 CAP2P40123 477 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 RHBDL3P58872 404 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 TFCP2Q12800 502 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 SPATA5Q8NB90 893 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 ARHGAP45Q92619 1136 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 MEIS3Q99687 375 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.2□□□□□ -0.32e-11■■■■■ 46.5
CSNK1D-226ENST00000585026 DHX36Q9H2U1 1008 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 RAI14Q9P0K7 980 aa13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 SUPT16HQ9Y5B9 1047 aaKnown RBP13.2□□□□□ -0.3
CSNK1D-226ENST00000585026 MYH13Q9UKX3 1938 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 BAG3O95817 575 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 PLCG2P16885 1265 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 HMGCS2P54868 508 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 G3BP1Q13283 466 aaKnown RBP eCLIP13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 MTX1Q13505 466 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 TEX11Q8IYF3 940 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 PAWRQ96IZ0 340 aaKnown RBP13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 TRIM34Q9BYJ4 488 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 HMX1Q9NP08 348 aaPredicted RBP13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 TMOD4Q9NZQ9 345 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 HMG20BQ9P0W2 317 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 LRP2BPQ9P2M1 347 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 PI4KBQ9UBF8 816 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 GTF3C3Q9Y5Q9 886 aa13.19□□□□□ -0.3
CSNK1D-226ENST00000585026 RPTORQ8N122 1335 aa13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 COL2A1P02458 1487 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 ASNSP08243 561 aa13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 RARSP54136 660 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 IRX3P78415 501 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 SH3D19Q5HYK7 790 aa13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 CCDC84Q86UT8 332 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 NBPF3Q9H094 633 aa13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 ASCC2Q9H1I8 757 aaPredicted RBP13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 GINM1Q9NU53 330 aa13.18□□□□□ -0.3
CSNK1D-226ENST00000585026 C19orf81C9J6K1 198 aa13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 IGSF3O75054 1194 aa13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 TRMT44Q8IYL2 757 aaKnown RBP13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 SLC17A8Q8NDX2 589 aa13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 GTF3C2Q8WUA4 911 aaPredicted RBP13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 MORF4L1Q9UBU8 362 aa13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 STAP2Q9UGK3 403 aa13.17□□□□□ -0.3
CSNK1D-226ENST00000585026 DOCK2Q92608 1830 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 FAM196BA6NMK8 535 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 GNAI2P04899 355 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 SLURP2P0DP57 97 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 ARID4AP29374 1257 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 BMP8BP34820 402 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 PDE3AQ14432 1141 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 FOXP4Q8IVH2 680 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 CRACR2BQ8N4Y2 399 aaPredicted RBP13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 NUDT12Q9BQG2 462 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 GJD2Q9UKL4 321 aa13.16□□□□□ -0.3
CSNK1D-226ENST00000585026 MYH2Q9UKX2 1941 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 XRCC5P13010 732 aaKnown RBP13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 BACE1P56817 501 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 CCDC158Q5M9N0 1113 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 NAA16Q6N069 864 aaPredicted RBP13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 GPR153Q6NV75 609 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 TBC1D9Q6ZT07 1266 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 GPRC5AQ8NFJ5 357 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 ZNF384Q8TF68 577 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 C11orf49Q9H6J7 331 aa13.15□□□□□ -0.3
CSNK1D-226ENST00000585026 USP17L10C9JJH3 530 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 HLA-DOAP06340 250 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 MAPK4P31152 587 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 MTMR2Q13614 643 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 TTC39AQ5SRH9 613 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 C7orf61Q8IZ16 206 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 GDF15Q99988 308 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 CWC22Q9HCG8 908 aaKnown RBP13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 DOCK1Q14185 1865 aa13.14□□□□□ -0.31
CSNK1D-226ENST00000585026 MGAMO43451 1857 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 CYP2B6P20813 491 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 MCAMP43121 646 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 PPP4CP60510 307 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 HERVK_113P62684 666 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 PI16Q6UXB8 463 aa13.13□□□□□ -0.31
CSNK1D-226ENST00000585026 SH3RF3Q8TEJ3 882 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms