RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 SLC23A3Q6PIS1 610 aa5.66□□□□□ -1.5
VAPA-208ENST00000584796 SPACA3Q8IXA5 215 aa5.66□□□□□ -1.5
VAPA-208ENST00000584796 SETDB2Q96T68 719 aa5.66□□□□□ -1.5
VAPA-208ENST00000584796 GTF2IRD1Q9UHL9 959 aa5.66□□□□□ -1.5
VAPA-208ENST00000584796 CSADQ9Y600 493 aa5.66□□□□□ -1.5
VAPA-208ENST00000584796 DCDC2CA8MYV0 355 aa5.65□□□□□ -1.5
VAPA-208ENST00000584796 MAPK8P45983 427 aa5.65□□□□□ -1.5
VAPA-208ENST00000584796 LRRC14Q15048 493 aa5.65□□□□□ -1.5
VAPA-208ENST00000584796 NKPD1Q17RQ9 610 aa5.65□□□□□ -1.5
VAPA-208ENST00000584796 C12orf40Q86WS4 652 aa5.65□□□□□ -1.5
VAPA-208ENST00000584796 ZSCAN29Q8IWY8 852 aaPredicted RBP5.65□□□□□ -1.5
VAPA-208ENST00000584796 FAM168AQ92567 244 aa5.65□□□□□ -1.5
VAPA-208ENST00000584796 ASB16Q96NS5 453 aa5.65□□□□□ -1.5
VAPA-208ENST00000584796 EOMESO95936 686 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 ZNF648Q5T619 568 aaPredicted RBP5.64□□□□□ -1.51
VAPA-208ENST00000584796 PCNX4Q63HM2 1172 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 ARMCX6Q7L4S7 300 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 KCT2Q8NC54 265 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 FLAD1Q8NFF5 587 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 TMEM40Q8WWA1 233 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 ASB11Q8WXH4 323 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 WWC3Q9ULE0 1092 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 PCDHA4Q9UN74 947 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 CYP8B1Q9UNU6 501 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 NISCHQ9Y2I1 1504 aa5.64□□□□□ -1.51
VAPA-208ENST00000584796 CELA3AP09093 270 aa5.63□□□□□ -1.51
VAPA-208ENST00000584796 CLCN7P51798 805 aa5.63□□□□□ -1.51
VAPA-208ENST00000584796 C12orf49Q9H741 205 aa5.63□□□□□ -1.51
VAPA-208ENST00000584796 PICK1Q9NRD5 415 aa5.63□□□□□ -1.51
VAPA-208ENST00000584796 FAM8A1Q9UBU6 413 aa5.63□□□□□ -1.51
VAPA-208ENST00000584796 SPG7Q9UQ90 795 aa5.63□□□□□ -1.51
VAPA-208ENST00000584796 MAPK8IP1Q9UQF2 711 aa5.63□□□□□ -1.51
VAPA-208ENST00000584796 LRIG2O94898 1065 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 USP17L7P0C7H9 530 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 ATP2B2Q01814 1243 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 INPP5AQ14642 412 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 LRFN4Q6PJG9 635 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 CDC37L1Q7L3B6 337 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 CYFIP1Q7L576 1253 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 GAL3ST3Q96A11 431 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 PRDM5Q9NQX1 630 aaPredicted RBP5.62□□□□□ -1.51
VAPA-208ENST00000584796 IVNS1ABPQ9Y6Y0 642 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 PITPNM2Q9BZ72 1349 aa5.62□□□□□ -1.51
VAPA-208ENST00000584796 GNAT3A8MTJ3 354 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 FARP2O94887 1054 aaPredicted RBP5.61□□□□□ -1.51
VAPA-208ENST00000584796 SLITRK5O94991 958 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 CAP2P40123 477 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 PTPN11Q06124 597 aaPredicted RBP5.61□□□□□ -1.51
VAPA-208ENST00000584796 IKZF1Q13422 519 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 SLBPQ14493 270 aaKnown RBP eCLIP5.61□□□□□ -1.51
VAPA-208ENST00000584796 C22orf34Q6ZV56 151 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 ZNF507Q8TCN5 953 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 ELMO3Q96BJ8 720 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 PRDM7Q9NQW5 492 aa5.61□□□□□ -1.51
VAPA-208ENST00000584796 P4HBP07237 508 aaKnown RBP5.6□□□□□ -1.51
VAPA-208ENST00000584796 ZP2Q05996 745 aa5.6□□□□□ -1.51
VAPA-208ENST00000584796 KCNA1Q09470 495 aa5.6□□□□□ -1.51
VAPA-208ENST00000584796 SV2BQ7L1I2 683 aa5.6□□□□□ -1.51
VAPA-208ENST00000584796 PLPPR2Q96GM1 343 aa5.6□□□□□ -1.51
VAPA-208ENST00000584796 FOXQ1Q9C009 403 aa5.6□□□□□ -1.51
VAPA-208ENST00000584796 FBRSQ9HAH7 460 aa5.6□□□□□ -1.51
VAPA-208ENST00000584796 LMCD1Q9NZU5 365 aa5.6□□□□□ -1.51
VAPA-208ENST00000584796 PRAMEF27A3QJZ7 478 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 ZNF865P0CJ78 1059 aaPredicted RBP5.59□□□□□ -1.51
VAPA-208ENST00000584796 HDXQ7Z353 690 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 ZSWIM9Q86XI8 627 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 FRMD6Q96NE9 622 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 WNT10AQ9GZT5 417 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 SEMA3GQ9NS98 782 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.59□□□□□ -1.51
VAPA-208ENST00000584796 CTNND2Q9UQB3 1225 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 SNCAIPQ9Y6H5 919 aa5.59□□□□□ -1.51
VAPA-208ENST00000584796 CNTNAP4Q9C0A0 1308 aa5.58□□□□□ -1.52
VAPA-208ENST00000584796 DBX1A6NMT0 343 aa5.58□□□□□ -1.52
VAPA-208ENST00000584796 PRR33A8MZF0 331 aa5.58□□□□□ -1.52
VAPA-208ENST00000584796 MESP2Q0VG99 397 aa5.58□□□□□ -1.52
VAPA-208ENST00000584796 ZNF124Q15973 351 aa5.58□□□□□ -1.52
VAPA-208ENST00000584796 NKG7Q16617 165 aa5.58□□□□□ -1.52
VAPA-208ENST00000584796 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.58□□□□□ -1.52
VAPA-208ENST00000584796 MFSD2AQ8NA29 543 aa5.58□□□□□ -1.52
VAPA-208ENST00000584796 ZNF503-AS2A6NEH8 195 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 LDHBP07195 334 aaKnown RBP5.57□□□□□ -1.52
VAPA-208ENST00000584796 GNA15P30679 374 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 KCNMB1Q16558 191 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 WIPI1Q5MNZ9 446 aaPredicted RBP5.57□□□□□ -1.52
VAPA-208ENST00000584796 SFRP5Q5T4F7 317 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 TTBK2Q6IQ55 1244 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 MFSD4AQ8N468 514 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 BHLHE22Q8NFJ8 381 aaPredicted RBP5.57□□□□□ -1.52
VAPA-208ENST00000584796 MIPEPQ99797 713 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 KRTAP4-7Q9BYR0 210 aa5.57□□□□□ -1.52
VAPA-208ENST00000584796 TTF2Q9UNY4 1162 aaKnown RBP5.57□□□□□ -1.52
VAPA-208ENST00000584796 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.56□□□□□ -1.52
VAPA-208ENST00000584796 CDK8P49336 464 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 RPS26P62854 115 aaKnown RBP5.56□□□□□ -1.52
VAPA-208ENST00000584796 PKN1Q16512 942 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 HID1Q8IV36 788 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 KSR1Q8IVT5 923 aa5.56□□□□□ -1.52
VAPA-208ENST00000584796 HSPA12BQ96MM6 686 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms