RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 NPM3O75607 178 aaKnown RBP20.44■□□□□ 0.86
CCDC57-219ENST00000584717 FARP2O94887 1054 aaPredicted RBP20.44■□□□□ 0.86
CCDC57-219ENST00000584717 GNAI2P04899 355 aa20.44■□□□□ 0.86
CCDC57-219ENST00000584717 TRIM27P14373 513 aa20.44■□□□□ 0.86
CCDC57-219ENST00000584717 SPP2Q13103 211 aa20.44■□□□□ 0.86
CCDC57-219ENST00000584717 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
CCDC57-219ENST00000584717 HTATIP2Q9BUP3 242 aa20.44■□□□□ 0.86
CCDC57-219ENST00000584717 OSBPL5Q9H0X9 879 aaPredicted RBP20.44■□□□□ 0.86
CCDC57-219ENST00000584717 COL2A1P02458 1487 aaPredicted RBP20.43■□□□□ 0.86
CCDC57-219ENST00000584717 MCAMP43121 646 aa20.43■□□□□ 0.86
CCDC57-219ENST00000584717 G3BP1Q13283 466 aaKnown RBP eCLIP20.43■□□□□ 0.86
CCDC57-219ENST00000584717 RRP1BQ14684 758 aaKnown RBP20.43■□□□□ 0.86
CCDC57-219ENST00000584717 TEX11Q8IYF3 940 aa20.43■□□□□ 0.86
CCDC57-219ENST00000584717 CLUAP1Q96AJ1 413 aa20.43■□□□□ 0.86
CCDC57-219ENST00000584717 PNMA3Q9UL41 463 aa20.43■□□□□ 0.86
CCDC57-219ENST00000584717 DOCK3Q8IZD9 2030 aa20.43■□□□□ 0.86
CCDC57-219ENST00000584717 SGPL1O95470 568 aa20.42■□□□□ 0.86
CCDC57-219ENST00000584717 MAP4K4O95819 1239 aaPredicted RBP20.42■□□□□ 0.86
CCDC57-219ENST00000584717 HMGCS2P54868 508 aa20.42■□□□□ 0.86
CCDC57-219ENST00000584717 IRF5Q13568 498 aa20.42■□□□□ 0.86
CCDC57-219ENST00000584717 PROCA1Q8NCQ7 364 aaPredicted RBP20.42■□□□□ 0.86
CCDC57-219ENST00000584717 ZNF280CQ8ND82 737 aa20.42■□□□□ 0.86
CCDC57-219ENST00000584717 PXYLP1Q8TE99 480 aa20.42■□□□□ 0.86
CCDC57-219ENST00000584717 SH3RF3Q8TEJ3 882 aaPredicted RBP20.42■□□□□ 0.86
CCDC57-219ENST00000584717 COA7Q96BR5 231 aa20.42■□□□□ 0.86
CCDC57-219ENST00000584717 LRP2BPQ9P2M1 347 aa20.42■□□□□ 0.86
CCDC57-219ENST00000584717 RBM27Q9P2N5 1060 aaKnown RBP20.42■□□□□ 0.86
CCDC57-219ENST00000584717 IPO8O15397 1037 aaKnown RBP20.41■□□□□ 0.86
CCDC57-219ENST00000584717 BCAR3O75815 825 aa20.41■□□□□ 0.86
CCDC57-219ENST00000584717 FAM110CQ1W6H9 321 aa20.41■□□□□ 0.86
CCDC57-219ENST00000584717 ATF7IPQ6VMQ6 1270 aa20.41■□□□□ 0.86
CCDC57-219ENST00000584717 DEFB118Q96PH6 123 aa20.41■□□□□ 0.86
CCDC57-219ENST00000584717 SNRKQ9NRH2 765 aa20.41■□□□□ 0.86
CCDC57-219ENST00000584717 MAST2Q6P0Q8 1798 aa20.41■□□□□ 0.86
CCDC57-219ENST00000584717 SIPA1L1O43166 1804 aa20.41■□□□□ 0.86
CCDC57-219ENST00000584717 TFRCP02786 760 aaKnown RBP20.4■□□□□ 0.86
CCDC57-219ENST00000584717 UQCRFS1P1P0C7P4 283 aa20.4■□□□□ 0.86
CCDC57-219ENST00000584717 CAP2P40123 477 aa20.4■□□□□ 0.86
CCDC57-219ENST00000584717 USP17L5A8MUK1 530 aa20.39■□□□□ 0.85
CCDC57-219ENST00000584717 NOL10Q9BSC4 688 aaKnown RBP20.39■□□□□ 0.85
CCDC57-219ENST00000584717 AATFQ9NY61 560 aaKnown RBP eCLIP20.39■□□□□ 0.85
CCDC57-219ENST00000584717 NR2E3Q9Y5X4 410 aa20.39■□□□□ 0.85
CCDC57-219ENST00000584717 TTC39AQ5SRH9 613 aa20.38■□□□□ 0.85
CCDC57-219ENST00000584717 NAA16Q6N069 864 aaPredicted RBP20.38■□□□□ 0.85
CCDC57-219ENST00000584717 TBC1D2Q9BYX2 928 aa20.38■□□□□ 0.85
CCDC57-219ENST00000584717 ASCC2Q9H1I8 757 aaPredicted RBP20.38■□□□□ 0.85
CCDC57-219ENST00000584717 PAK6Q9NQU5 681 aaPredicted RBP20.38■□□□□ 0.85
CCDC57-219ENST00000584717 HERC5Q9UII4 1024 aaKnown RBP20.38■□□□□ 0.85
CCDC57-219ENST00000584717 CDK5RAP2Q96SN8 1893 aa20.37■□□□□ 0.85
CCDC57-219ENST00000584717 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
CCDC57-219ENST00000584717 ZBTB7BO15156 539 aaPredicted RBP20.37■□□□□ 0.85
CCDC57-219ENST00000584717 GCLCP48506 637 aaPredicted RBP20.37■□□□□ 0.85
CCDC57-219ENST00000584717 PABPC4Q13310 644 aaKnown RBP eCLIP20.37■□□□□ 0.85
CCDC57-219ENST00000584717 MAPKAPK5Q8IW41 473 aa20.37■□□□□ 0.85
CCDC57-219ENST00000584717 DBNDD2Q9BQY9 259 aa20.37■□□□□ 0.85
CCDC57-219ENST00000584717 AS3MTQ9HBK9 375 aa20.37■□□□□ 0.85
CCDC57-219ENST00000584717 OS9Q13438 667 aaPredicted RBP20.36■□□□□ 0.85
CCDC57-219ENST00000584717 TNNI3KQ59H18 835 aa20.36■□□□□ 0.85
CCDC57-219ENST00000584717 SH3D19Q5HYK7 790 aa20.36■□□□□ 0.85
CCDC57-219ENST00000584717 TMEM57Q8N5G2 664 aa20.36■□□□□ 0.85
CCDC57-219ENST00000584717 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.36■□□□□ 0.851e-5■■■■□ 21.4
CCDC57-219ENST00000584717 PI4KBQ9UBF8 816 aa20.36■□□□□ 0.85
CCDC57-219ENST00000584717 FPGT-TNNI3KV9GXZ4 949 aa20.36■□□□□ 0.85
CCDC57-219ENST00000584717 MYO5AQ9Y4I1 1855 aaKnown RBP20.36■□□□□ 0.85
CCDC57-219ENST00000584717 FOCADQ5VW36 1801 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 EVI5O60447 810 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 BAG3O95817 575 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 JAG1P78504 1218 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 MTMR2Q13614 643 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 SHROOM1Q2M3G4 852 aaPredicted RBP20.35■□□□□ 0.85
CCDC57-219ENST00000584717 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
CCDC57-219ENST00000584717 ADGRA1Q86SQ6 560 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 TGFBRAP1Q8WUH2 860 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 PRO3102Q9H379 93 aa20.35■□□□□ 0.85
CCDC57-219ENST00000584717 FLT1P17948 1338 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 ALPK3Q96L96 1907 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 CYP2E1P05181 493 aaPredicted RBP20.34■□□□□ 0.85
CCDC57-219ENST00000584717 POLA2Q14181 598 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 CCDC158Q5M9N0 1113 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 PAWRQ96IZ0 340 aaKnown RBP20.34■□□□□ 0.85
CCDC57-219ENST00000584717 CRISPLD2Q9H0B8 497 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 DHX36Q9H2U1 1008 aaKnown RBP20.34■□□□□ 0.85
CCDC57-219ENST00000584717 C1orf115Q9H7X2 142 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 DNAJC18Q9H819 358 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 GPR108Q9NPR9 543 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 PLXNB2O15031 1838 aa20.34■□□□□ 0.85
CCDC57-219ENST00000584717 PEX10O60683 326 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 GDF11O95390 407 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 HMGCRP04035 888 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 PLCG2P16885 1265 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 IRX3P78415 501 aaPredicted RBP20.33■□□□□ 0.85
CCDC57-219ENST00000584717 TRIM32Q13049 653 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 CRACR2BQ8N4Y2 399 aaPredicted RBP20.33■□□□□ 0.85
CCDC57-219ENST00000584717 DIS3LQ8TF46 1054 aaKnown RBP20.33■□□□□ 0.85
CCDC57-219ENST00000584717 WDR18Q9BV38 432 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 TRIM34Q9BYJ4 488 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 SAP30BPQ9UHR5 308 aaKnown RBP20.33■□□□□ 0.85
CCDC57-219ENST00000584717 GJD2Q9UKL4 321 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 PALD1Q9ULE6 856 aa20.33■□□□□ 0.85
CCDC57-219ENST00000584717 ASNSP08243 561 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms