RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 SZT2Q5T011 3432 aa16.12■□□□□ 0.17
CDK5RAP3-234ENST00000584525 RANBP2P49792 3224 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 GPR75-ASB3A0A0A6YYF3 556 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 A0A1B0GUL7 405 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 RLBP1P12271 317 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 TFCP2Q12800 502 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 MVPQ14764 893 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 TREML2Q5T2D2 321 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 NEUROD6Q96NK8 337 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PRO3102Q9H379 93 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 C1orf115Q9H7X2 142 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 COG6Q9Y2V7 657 aa16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PDS5AQ29RF7 1337 aaKnown RBP16.11■□□□□ 0.17
CDK5RAP3-234ENST00000584525 FAM196BA6NMK8 535 aa16.1■□□□□ 0.17
CDK5RAP3-234ENST00000584525 TBC1D12O60347 775 aa16.1■□□□□ 0.17
CDK5RAP3-234ENST00000584525 CAPN2P17655 700 aa16.1■□□□□ 0.17
CDK5RAP3-234ENST00000584525 RHBDL3P58872 404 aa16.1■□□□□ 0.17
CDK5RAP3-234ENST00000584525 GSTO1P78417 241 aa16.1■□□□□ 0.17
CDK5RAP3-234ENST00000584525 SPP2Q13103 211 aa16.1■□□□□ 0.17
CDK5RAP3-234ENST00000584525 G3BP1Q13283 466 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDK5RAP3-234ENST00000584525 LDHCP07864 332 aa16.09■□□□□ 0.17
CDK5RAP3-234ENST00000584525 FAM110CQ1W6H9 321 aa16.09■□□□□ 0.17
CDK5RAP3-234ENST00000584525 GORABQ5T7V8 394 aa16.09■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PROCA1Q8NCQ7 364 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-234ENST00000584525 ZNF280CQ8ND82 737 aa16.09■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PAWRQ96IZ0 340 aaKnown RBP16.09■□□□□ 0.17
CDK5RAP3-234ENST00000584525 PAK6Q9NQU5 681 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-234ENST00000584525 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 HMGCS2P54868 508 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 PABPC4Q13310 644 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 PDE3AQ14432 1141 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 ZNF384Q8TF68 577 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 OSBPL5Q9H0X9 879 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 RAI14Q9P0K7 980 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 HMG20BQ9P0W2 317 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 STAP2Q9UGK3 403 aa16.08■□□□□ 0.16
CDK5RAP3-234ENST00000584525 GCLCP48506 637 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-234ENST00000584525 MTX1Q13505 466 aa16.07■□□□□ 0.16
CDK5RAP3-234ENST00000584525 NECAB2Q7Z6G3 386 aa16.07■□□□□ 0.16
CDK5RAP3-234ENST00000584525 SPATA5Q8NB90 893 aa16.07■□□□□ 0.16
CDK5RAP3-234ENST00000584525 A0A1W2PPC1 479 aa16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 USP17L5A8MUK1 530 aa16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 HMMRO75330 724 aa16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 MAP4K4O95819 1239 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 CAP2P40123 477 aa16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 PI16Q6UXB8 463 aa16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 TEX11Q8IYF3 940 aa16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 DIS3LQ8TF46 1054 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 NSUN4Q96CB9 384 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 TBC1D2Q9BYX2 928 aa16.06■□□□□ 0.16
CDK5RAP3-234ENST00000584525 HMGCRP04035 888 aa16.05■□□□□ 0.16
CDK5RAP3-234ENST00000584525 RRP1P56182 461 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-234ENST00000584525 RRP1BQ14684 758 aaKnown RBP16.05■□□□□ 0.16
CDK5RAP3-234ENST00000584525 ASCC2Q9H1I8 757 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-234ENST00000584525 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
CDK5RAP3-234ENST00000584525 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.05■□□□□ 0.16
CDK5RAP3-234ENST00000584525 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 SURF6O75683 361 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 C7orf61Q8IZ16 206 aa16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 SLC17A8Q8NDX2 589 aa16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 NOL10Q9BSC4 688 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 AS3MTQ9HBK9 375 aa16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 HMX1Q9NP08 348 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 GJD2Q9UKL4 321 aa16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 AK9Q5TCS8 1911 aa16.04■□□□□ 0.16
CDK5RAP3-234ENST00000584525 RPTORQ8N122 1335 aa16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 SOX1O00570 391 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 TRIM32Q13049 653 aa16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 SH3RF3Q8TEJ3 882 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 LRCH3Q96II8 777 aa16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 TMOD4Q9NZQ9 345 aa16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 PI4KBQ9UBF8 816 aa16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 HERC5Q9UII4 1024 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 ZMYND8Q9ULU4 1186 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-234ENST00000584525 UQCRFS1P1P0C7P4 283 aa16.02■□□□□ 0.16
CDK5RAP3-234ENST00000584525 CYP2B6P20813 491 aa16.02■□□□□ 0.16
CDK5RAP3-234ENST00000584525 MTMR2Q13614 643 aa16.02■□□□□ 0.16
CDK5RAP3-234ENST00000584525 HSP90AB4PQ58FF6 505 aa16.02■□□□□ 0.16
CDK5RAP3-234ENST00000584525 SH3D19Q5HYK7 790 aa16.02■□□□□ 0.16
CDK5RAP3-234ENST00000584525 CEP85Q6P2H3 762 aa16.02■□□□□ 0.16
CDK5RAP3-234ENST00000584525 NBPF3Q9H094 633 aa16.02■□□□□ 0.16
CDK5RAP3-234ENST00000584525 BAG3O95817 575 aa16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 ARID4AP29374 1257 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 MCAMP43121 646 aa16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 BACE1P56817 501 aa16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 C20orf194Q5TEA3 1177 aa16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 ERC1Q8IUD2 1116 aa16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 RPAP2Q8IXW5 612 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 GPRC5AQ8NFJ5 357 aa16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 SSH3Q8TE77 659 aa16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 P2RX7Q99572 595 aaKnown RBP16.01■□□□□ 0.15
CDK5RAP3-234ENST00000584525 WDR18Q9BV38 432 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms