RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 COL2A1P02458 1487 aaPredicted RBP16.65■□□□□ 0.26
CCDC57-218ENST00000583593 SIPA1L1O43166 1804 aa16.65■□□□□ 0.26
CCDC57-218ENST00000583593 PNMA6EA0A0J9YXQ4 647 aa16.64■□□□□ 0.25
CCDC57-218ENST00000583593 TNPO2O14787 897 aaKnown RBP16.64■□□□□ 0.25
CCDC57-218ENST00000583593 SPP2Q13103 211 aa16.64■□□□□ 0.25
CCDC57-218ENST00000583593 HTATIP2Q9BUP3 242 aa16.64■□□□□ 0.25
CCDC57-218ENST00000583593 OSBPL5Q9H0X9 879 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-218ENST00000583593 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.64■□□□□ 0.25
CCDC57-218ENST00000583593 FARP2O94887 1054 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-218ENST00000583593 MAP4K4O95819 1239 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-218ENST00000583593 LDHCP07864 332 aa16.63■□□□□ 0.25
CCDC57-218ENST00000583593 CAP2P40123 477 aa16.63■□□□□ 0.25
CCDC57-218ENST00000583593 MCAMP43121 646 aa16.63■□□□□ 0.25
CCDC57-218ENST00000583593 FAM110CQ1W6H9 321 aa16.63■□□□□ 0.25
CCDC57-218ENST00000583593 PROCA1Q8NCQ7 364 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-218ENST00000583593 PAK6Q9NQU5 681 aaPredicted RBP16.63■□□□□ 0.25
CCDC57-218ENST00000583593 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
CCDC57-218ENST00000583593 ZBTB7BO15156 539 aaPredicted RBP16.62■□□□□ 0.25
CCDC57-218ENST00000583593 TRIM27P14373 513 aa16.62■□□□□ 0.25
CCDC57-218ENST00000583593 GSTO1P78417 241 aa16.62■□□□□ 0.25
CCDC57-218ENST00000583593 ZNF280CQ8ND82 737 aa16.62■□□□□ 0.25
CCDC57-218ENST00000583593 DEFB118Q96PH6 123 aa16.62■□□□□ 0.25
CCDC57-218ENST00000583593 CRISPLD2Q9H0B8 497 aa16.62■□□□□ 0.25
CCDC57-218ENST00000583593 ALPK3Q96L96 1907 aa16.62■□□□□ 0.25
CCDC57-218ENST00000583593 PLXNB2O15031 1838 aa16.61■□□□□ 0.25
CCDC57-218ENST00000583593 CDK5RAP2Q96SN8 1893 aa16.61■□□□□ 0.25
CCDC57-218ENST00000583593 GNAI2P04899 355 aa16.61■□□□□ 0.25
CCDC57-218ENST00000583593 HMGCS2P54868 508 aa16.61■□□□□ 0.25
CCDC57-218ENST00000583593 SH3RF3Q8TEJ3 882 aaPredicted RBP16.61■□□□□ 0.25
CCDC57-218ENST00000583593 COA7Q96BR5 231 aa16.61■□□□□ 0.25
CCDC57-218ENST00000583593 RAI14Q9P0K7 980 aa16.61■□□□□ 0.25
CCDC57-218ENST00000583593 PNMA3Q9UL41 463 aa16.61■□□□□ 0.25
CCDC57-218ENST00000583593 MYO5AQ9Y4I1 1855 aaKnown RBP16.61■□□□□ 0.25
CCDC57-218ENST00000583593 BCAR3O75815 825 aa16.6■□□□□ 0.25
CCDC57-218ENST00000583593 JAG1P78504 1218 aa16.6■□□□□ 0.25
CCDC57-218ENST00000583593 SH3D19Q5HYK7 790 aa16.6■□□□□ 0.25
CCDC57-218ENST00000583593 GORABQ5T7V8 394 aa16.6■□□□□ 0.25
CCDC57-218ENST00000583593 ATF7IPQ6VMQ6 1270 aa16.6■□□□□ 0.25
CCDC57-218ENST00000583593 TEX11Q8IYF3 940 aa16.6■□□□□ 0.25
CCDC57-218ENST00000583593 GJD2Q9UKL4 321 aa16.6■□□□□ 0.25
CCDC57-218ENST00000583593 FOCADQ5VW36 1801 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 USP17L5A8MUK1 530 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 TFRCP02786 760 aaKnown RBP16.59■□□□□ 0.25
CCDC57-218ENST00000583593 UQCRFS1P1P0C7P4 283 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 GCLCP48506 637 aaPredicted RBP16.59■□□□□ 0.25
CCDC57-218ENST00000583593 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC57-218ENST00000583593 TBC1D2Q9BYX2 928 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 ASCC2Q9H1I8 757 aaPredicted RBP16.59■□□□□ 0.25
CCDC57-218ENST00000583593 LRP2BPQ9P2M1 347 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 HERC5Q9UII4 1024 aaKnown RBP16.59■□□□□ 0.25
CCDC57-218ENST00000583593 TAOK2Q9UL54 1235 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 NR2E3Q9Y5X4 410 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
CCDC57-218ENST00000583593 CAPN2P17655 700 aa16.58■□□□□ 0.24
CCDC57-218ENST00000583593 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.24
CCDC57-218ENST00000583593 ADGRA1Q86SQ6 560 aa16.58■□□□□ 0.24
CCDC57-218ENST00000583593 CLUAP1Q96AJ1 413 aa16.58■□□□□ 0.24
CCDC57-218ENST00000583593 DNAJC18Q9H819 358 aa16.58■□□□□ 0.24
CCDC57-218ENST00000583593 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
CCDC57-218ENST00000583593 AATFQ9NY61 560 aaKnown RBP eCLIP16.58■□□□□ 0.24
CCDC57-218ENST00000583593 PI4KBQ9UBF8 816 aa16.58■□□□□ 0.24
CCDC57-218ENST00000583593 PPP4CP60510 307 aa16.57■□□□□ 0.24
CCDC57-218ENST00000583593 TRIM32Q13049 653 aa16.57■□□□□ 0.24
CCDC57-218ENST00000583593 METTL16Q86W50 562 aaKnown RBP16.57■□□□□ 0.24
CCDC57-218ENST00000583593 DIS3LQ8TF46 1054 aaKnown RBP16.57■□□□□ 0.24
CCDC57-218ENST00000583593 FRAT1Q92837 279 aaPredicted RBP16.57■□□□□ 0.24
CCDC57-218ENST00000583593 PAWRQ96IZ0 340 aaKnown RBP16.57■□□□□ 0.24
CCDC57-218ENST00000583593 DBNDD2Q9BQY9 259 aa16.57■□□□□ 0.24
CCDC57-218ENST00000583593 WDR18Q9BV38 432 aa16.57■□□□□ 0.24
CCDC57-218ENST00000583593 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.57■□□□□ 0.244e-6■■■■■ 27
CCDC57-218ENST00000583593 COL6A3P12111 3177 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 IPO8O15397 1037 aaKnown RBP16.56■□□□□ 0.24
CCDC57-218ENST00000583593 EVI5O60447 810 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 PEX10O60683 326 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-218ENST00000583593 PABPC4Q13310 644 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCDC57-218ENST00000583593 POLA2Q14181 598 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 TNNI3KQ59H18 835 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 NAA16Q6N069 864 aaPredicted RBP16.56■□□□□ 0.24
CCDC57-218ENST00000583593 DHX36Q9H2U1 1008 aaKnown RBP16.56■□□□□ 0.24
CCDC57-218ENST00000583593 AS3MTQ9HBK9 375 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 GPR108Q9NPR9 543 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 MORF4L1Q9UBU8 362 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 FPGT-TNNI3KV9GXZ4 949 aa16.56■□□□□ 0.24
CCDC57-218ENST00000583593 FLT1P17948 1338 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 CCER2I3L3R5 266 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 HMGCRP04035 888 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 HOXA7P31268 230 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-218ENST00000583593 MNX1P50219 401 aaPredicted RBP16.55■□□□□ 0.24
CCDC57-218ENST00000583593 BACE1P56817 501 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 MTMR2Q13614 643 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 MAPKAPK5Q8IW41 473 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 TMEM57Q8N5G2 664 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 TGFBRAP1Q8WUH2 860 aa16.55■□□□□ 0.24
CCDC57-218ENST00000583593 P2RX7Q99572 595 aaKnown RBP16.55■□□□□ 0.24
CCDC57-218ENST00000583593 RPTORQ8N122 1335 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 BAG3O95817 575 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 ASNSP08243 561 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 TTC39AQ5SRH9 613 aa16.54■□□□□ 0.24
CCDC57-218ENST00000583593 POTEEQ6S8J3 1075 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms