RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 PI4KBQ9UBF8 816 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 PALD1Q9ULE6 856 aa15.23■□□□□ 0.03
SMARCE1-218ENST00000582955 PHF20L1A8MW92 1017 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 TBC1D12O60347 775 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 HLA-DOAP06340 250 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 MAP3K10Q02779 954 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 NOL9Q5SY16 702 aaKnown RBP15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 LCORLQ8N3X6 602 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 CRACR2BQ8N4Y2 399 aaPredicted RBP15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 KBTBD3Q8NAB2 608 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 ARMT1Q9H993 441 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 PICK1Q9NRD5 415 aa15.22■□□□□ 0.03
SMARCE1-218ENST00000582955 MYH7P12883 1935 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 SALL3Q9BXA9 1300 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 MBD4O95243 580 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 CHGBP05060 677 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 GTF2A2P52657 109 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 PPATQ06203 517 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 PPIL2Q13356 520 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 UBE3CQ15386 1083 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 IFNL1Q8IU54 200 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 SCYL3Q8IZE3 742 aa15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 HERC5Q9UII4 1024 aaKnown RBP15.21■□□□□ 0.03
SMARCE1-218ENST00000582955 CCL15-CCL14A0A0B4J2E2 113 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 IGF2BP3O00425 579 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 IRF6O14896 467 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 CTNND1O60716 968 aaKnown RBP15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 TBC1D8O95759 1140 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 ALDH1A1P00352 501 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 SNAPC2Q13487 334 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 CCL15Q16663 113 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 OTUD7BQ6GQQ9 843 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 CHD1LQ86WJ1 897 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 SDR42E1Q8WUS8 393 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 MS4A4AQ96JQ5 239 aa15.2■□□□□ 0.02
SMARCE1-218ENST00000582955 LAMB1P07942 1786 aa15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 POLR3DP05423 398 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 PDE1AP54750 535 aa15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 LRRFIP1Q32MZ4 808 aaKnown RBP15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 FOXP4Q8IVH2 680 aaPredicted RBP15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 BRI3BPQ8WY22 251 aa15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 FSD1Q9BTV5 496 aa15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 SIPA1L1O43166 1804 aa15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 MYH1P12882 1939 aa15.19■□□□□ 0.02
SMARCE1-218ENST00000582955 DOCK1Q14185 1865 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 NAV1Q8NEY1 1877 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 TESPA1A2RU30 521 aaPredicted RBP15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 RNF113AO15541 343 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 ZFYP08048 801 aaPredicted RBP15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 CETPP11597 493 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 PTPRAP18433 802 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 NUCB1Q02818 461 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 TTC6Q86TZ1 520 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 PTPN18Q99952 460 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 PUS7LQ9H0K6 701 aaKnown RBP15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 STAP2Q9UGK3 403 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 ZHX2Q9Y6X8 837 aa15.18■□□□□ 0.02
SMARCE1-218ENST00000582955 PRKAB2O43741 272 aa15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 CAP2P40123 477 aa15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 CCDC84Q86UT8 332 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 TNS4Q8IZW8 715 aa15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 APPBP2Q92624 585 aa15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 DDRGK1Q96HY6 314 aa15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 DNAJC18Q9H819 358 aa15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 DCP1AQ9NPI6 582 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 SLC4A4Q9Y6R1 1079 aa15.17■□□□□ 0.02
SMARCE1-218ENST00000582955 RRP1BQ14684 758 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-218ENST00000582955 METTL16Q86W50 562 aaKnown RBP15.16■□□□□ 0.02
SMARCE1-218ENST00000582955 ATP8A2Q9NTI2 1148 aa15.16■□□□□ 0.02
SMARCE1-218ENST00000582955 SERPINB13Q9UIV8 391 aa15.16■□□□□ 0.02
SMARCE1-218ENST00000582955 KCNH4Q9UQ05 1017 aa15.16■□□□□ 0.02
SMARCE1-218ENST00000582955 DDX60LQ5H9U9 1706 aaKnown RBP15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 CASP8AP2Q9UKL3 1982 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 TRIM75PA6NK02 468 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 GDF11O95390 407 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 PLCD1P51178 756 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 AMOTL1Q8IY63 956 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 FAM43AQ8N2R8 423 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 OSBP2Q969R2 916 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 EVI5LQ96CN4 794 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 CFHR5Q9BXR6 569 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 EHD4Q9H223 541 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 R3HDMLQ9H3Y0 253 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 AFG3L2Q9Y4W6 797 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 ATAD5Q96QE3 1844 aa15.15■□□□□ 0.02
SMARCE1-218ENST00000582955 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 BTBD19C9JJ37 291 aa15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 GPR25O00155 361 aa15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 CXCL11O14625 94 aa15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 ASNSP08243 561 aa15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 CYP2D6P10635 497 aa15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 CRHR2Q13324 411 aa15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 TAF1CQ15572 869 aaPredicted RBP15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 STRBPQ96SI9 672 aaKnown RBP15.14■□□□□ 0.01
SMARCE1-218ENST00000582955 USP17L5A8MUK1 530 aa15.13■□□□□ 0.01
SMARCE1-218ENST00000582955 M0R2C6 588 aa15.13■□□□□ 0.01
SMARCE1-218ENST00000582955 GPAA1O43292 621 aa15.13■□□□□ 0.01
SMARCE1-218ENST00000582955 EVX2Q03828 476 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms