RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 HIBADHP31937 336 aaKnown RBP15.79■□□□□ 0.12
SRSF1-205ENST00000582730 RFC4P35249 363 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 ZNF75DP51815 510 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 MEX3CQ5U5Q3 659 aaKnown RBP15.79■□□□□ 0.12
SRSF1-205ENST00000582730 CCDC186Q7Z3E2 898 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 RIOK1Q9BRS2 568 aaKnown RBP15.79■□□□□ 0.12
SRSF1-205ENST00000582730 GTPBP4Q9BZE4 634 aaKnown RBP15.79■□□□□ 0.12
SRSF1-205ENST00000582730 LAMB2P55268 1798 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 WDHD1O75717 1129 aaPredicted RBP15.79■□□□□ 0.12
SRSF1-205ENST00000582730 ZNF202O95125 648 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 CAVIN2O95810 425 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 ISM2Q6H9L7 571 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 PDCL2Q8N4E4 241 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 KIAA1524Q8TCG1 905 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 WASF1Q92558 559 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 BCORQ6W2J9 1755 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 BTBD18B2RXH4 712 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 IFNAR1P17181 557 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 SLC39A14Q15043 492 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 AOPEPQ8N6M6 819 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 KCNF1Q9H3M0 494 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 NRBP1Q9UHY1 535 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 PYCARDQ9ULZ3 195 aa15.79■□□□□ 0.12
SRSF1-205ENST00000582730 MROH7-TTC4A0A0A0MT08 1334 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 SLC3A2P08195 630 aaKnown RBP15.78■□□□□ 0.12
SRSF1-205ENST00000582730 PRDX5P30044 214 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.78■□□□□ 0.12
SRSF1-205ENST00000582730 ANKIB1Q9P2G1 1089 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 CLIP2Q9UDT6 1046 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 CHD4Q14839 1912 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 RIOK3O14730 519 aaKnown RBP15.78■□□□□ 0.12
SRSF1-205ENST00000582730 AKAP17AQ02040 695 aaKnown RBP15.78■□□□□ 0.12
SRSF1-205ENST00000582730 MECOMQ03112 1051 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 IQCB1Q15051 598 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 DIS3L2Q8IYB7 885 aaKnown RBP15.78■□□□□ 0.12
SRSF1-205ENST00000582730 TMTC2Q8N394 836 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 FANCBQ8NB91 859 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 CLIC6Q96NY7 704 aa15.78■□□□□ 0.12
SRSF1-205ENST00000582730 CCDC196A0A1B0GTZ2 297 aa15.77■□□□□ 0.12
SRSF1-205ENST00000582730 hCG_1642624A0A1W2PR95 340 aa15.77■□□□□ 0.12
SRSF1-205ENST00000582730 USP17L12C9JPN9 530 aa15.77■□□□□ 0.12
SRSF1-205ENST00000582730 USP17L21D6R901 530 aa15.77■□□□□ 0.12
SRSF1-205ENST00000582730 TPM3P06753 285 aa15.77■□□□□ 0.12
SRSF1-205ENST00000582730 RC3H1Q5TC82 1133 aaKnown RBP15.77■□□□□ 0.12
SRSF1-205ENST00000582730 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
SRSF1-205ENST00000582730 SYKP43405 635 aa15.77■□□□□ 0.11
SRSF1-205ENST00000582730 AXDND1Q5T1B0 1012 aaPredicted RBP15.77■□□□□ 0.11
SRSF1-205ENST00000582730 TXNRD3Q86VQ6 643 aa15.77■□□□□ 0.11
SRSF1-205ENST00000582730 ZNF384Q8TF68 577 aa15.77■□□□□ 0.11
SRSF1-205ENST00000582730 ANKRD2Q9GZV1 360 aa15.77■□□□□ 0.11
SRSF1-205ENST00000582730 NAT10Q9H0A0 1025 aaKnown RBP15.77■□□□□ 0.11
SRSF1-205ENST00000582730 KIAA1468Q9P260 1216 aa15.77■□□□□ 0.11
SRSF1-205ENST00000582730 CICQ96RK0 1608 aaPredicted RBP15.77■□□□□ 0.11
SRSF1-205ENST00000582730 EVX2Q03828 476 aa15.77■□□□□ 0.11
SRSF1-205ENST00000582730 IFIT1BQ5T764 474 aaKnown RBP15.77■□□□□ 0.11
SRSF1-205ENST00000582730 FBXO33Q7Z6M2 555 aa15.77■□□□□ 0.11
SRSF1-205ENST00000582730 CMA1P23946 247 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 LRMPQ12912 555 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 DPCR1Q3MIW9 517 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 IQCA1Q86XH1 822 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 PLA2G4DQ86XP0 818 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 DZIP1Q86YF9 867 aaKnown RBP15.76■□□□□ 0.11
SRSF1-205ENST00000582730 NSUN4Q96CB9 384 aaKnown RBP15.76■□□□□ 0.11
SRSF1-205ENST00000582730 STK36Q9NRP7 1315 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 DEXIO95424 95 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 SPECC1Q5M775 1068 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 FAM196AQ6ZSG2 479 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 NOSTRINQ8IVI9 506 aa15.76■□□□□ 0.11
SRSF1-205ENST00000582730 U2AF2P26368 475 aaKnown RBP eCLIP15.75■□□□□ 0.117e-14■■■□□ 15.6
SRSF1-205ENST00000582730 NR5A1Q13285 461 aa15.75■□□□□ 0.11
SRSF1-205ENST00000582730 TRAPPC3LQ5T215 181 aa15.75■□□□□ 0.11
SRSF1-205ENST00000582730 FNBP4Q8N3X1 1017 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-205ENST00000582730 CRACR2BQ8N4Y2 399 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-205ENST00000582730 ENAHQ8N8S7 591 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-205ENST00000582730 ZSCAN10Q96SZ4 725 aaPredicted RBP15.75■□□□□ 0.11
SRSF1-205ENST00000582730 MMP1P03956 469 aa15.75■□□□□ 0.11
SRSF1-205ENST00000582730 KIF20AO95235 890 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 CTR9Q6PD62 1173 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 CATIPQ7Z7H3 387 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 TIAM2Q8IVF5 1701 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 DHX40Q8IX18 779 aaKnown RBP15.74■□□□□ 0.11
SRSF1-205ENST00000582730 ANKRD7Q92527 254 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 CRNKL1Q9BZJ0 848 aaKnown RBP15.74■□□□□ 0.11
SRSF1-205ENST00000582730 PTPAQ15257 358 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 FAM47AQ5JRC9 791 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 SHC4Q6S5L8 630 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 BRIP1Q9BX63 1249 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 SEMA3EO15041 775 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 CYP2D6P10635 497 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 FILIP1Q7Z7B0 1213 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 GPR101Q96P66 508 aaPredicted RBP15.74■□□□□ 0.11
SRSF1-205ENST00000582730 MAP3K14Q99558 947 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 VPS54Q9P1Q0 977 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 ANAPC4Q9UJX5 808 aa15.74■□□□□ 0.11
SRSF1-205ENST00000582730 BAZ2AQ9UIF9 1905 aaKnown RBP15.74■□□□□ 0.11
SRSF1-205ENST00000582730 PPP6R2O75170 966 aa15.73■□□□□ 0.11
SRSF1-205ENST00000582730 SEC23AQ15436 765 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms