RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 SLC4A2P04920 1241 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 ZEB1P37275 1124 aaPredicted RBP11.65□□□□□ -0.54
GGA3-212ENST00000582376 MAP3K10Q02779 954 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 FLIIQ13045 1269 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 FKBP5Q13451 457 aaPredicted RBP11.65□□□□□ -0.54
GGA3-212ENST00000582376 DIXDC1Q155Q3 683 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 POTEEQ6S8J3 1075 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 ALYREFQ86V81 257 aaKnown RBP11.65□□□□□ -0.54
GGA3-212ENST00000582376 ZSCAN29Q8IWY8 852 aaPredicted RBP11.65□□□□□ -0.54
GGA3-212ENST00000582376 CCER1Q8TC90 406 aaPredicted RBP11.65□□□□□ -0.54
GGA3-212ENST00000582376 LPAR1Q92633 364 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 USP6NLQ92738 828 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 APBA2Q99767 749 aa11.65□□□□□ -0.54
GGA3-212ENST00000582376 DDX20Q9UHI6 824 aaKnown RBP11.65□□□□□ -0.54
GGA3-212ENST00000582376 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.64□□□□□ -0.55
GGA3-212ENST00000582376 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.64□□□□□ -0.55
GGA3-212ENST00000582376 ENTPD3O75355 529 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 MAPK4P31152 587 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 RGS3P49796 1198 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 HMGCS2P54868 508 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 IRX3P78415 501 aaPredicted RBP11.64□□□□□ -0.55
GGA3-212ENST00000582376 SPP2Q13103 211 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 SLC39A5Q6ZMH5 540 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 CCAR1Q8IX12 1150 aaKnown RBP11.64□□□□□ -0.55
GGA3-212ENST00000582376 GPRC5AQ8NFJ5 357 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 WDR66Q8TBY9 1149 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 FRMPD3Q5JV73 1810 aa11.64□□□□□ -0.55
GGA3-212ENST00000582376 SLURP2P0DP57 97 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 WDR43Q15061 677 aaKnown RBP eCLIP11.63□□□□□ -0.55
GGA3-212ENST00000582376 TRIM60Q495X7 471 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 MORN1Q5T089 497 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 MFSD14CQ5VZR4 134 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 SH3BP5LQ7L8J4 393 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 ZNF280CQ8ND82 737 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 TIFAQ96CG3 184 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 NECAB3Q96P71 396 aaPredicted RBP11.63□□□□□ -0.55
GGA3-212ENST00000582376 IDI2Q9BXS1 227 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 TBC1D2Q9BYX2 928 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 PDLIM7Q9NR12 457 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
GGA3-212ENST00000582376 TRIM43BA6NCK2 446 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 CNGA1P29973 690 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 METTL24Q5JXM2 366 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 TMEM31Q5JXX7 168 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 GPR142Q7Z601 462 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 SH3RF1Q7Z6J0 888 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 PLEKHH3Q7Z736 793 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 TRIM43Q96BQ3 446 aaPredicted RBP11.62□□□□□ -0.55
GGA3-212ENST00000582376 TXNRD2Q9NNW7 524 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 CDH23Q9H251 3354 aa11.62□□□□□ -0.55
GGA3-212ENST00000582376 PIEZO1Q92508 2521 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 DDTLA6NHG4 134 aaPredicted RBP11.61□□□□□ -0.55
GGA3-212ENST00000582376 KBTBD13C9JR72 458 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 PEX10O60683 326 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 SNX17Q15036 470 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 CCDC85BQ15834 202 aaPredicted RBP11.61□□□□□ -0.55
GGA3-212ENST00000582376 SH3D19Q5HYK7 790 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 GJC2Q5T442 439 aaPredicted RBP11.61□□□□□ -0.55
GGA3-212ENST00000582376 ARRDC4Q8NCT1 418 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 P2RX7Q99572 595 aaKnown RBP11.61□□□□□ -0.55
GGA3-212ENST00000582376 OSBPL5Q9H0X9 879 aaPredicted RBP11.61□□□□□ -0.55
GGA3-212ENST00000582376 TSPYL2Q9H2G4 693 aaPredicted RBP11.61□□□□□ -0.55
GGA3-212ENST00000582376 PRDM12Q9H4Q4 367 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 EPHX3Q9H6B9 360 aa11.61□□□□□ -0.55
GGA3-212ENST00000582376 CWC22Q9HCG8 908 aaKnown RBP11.61□□□□□ -0.55
GGA3-212ENST00000582376 UTYO14607 1347 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 KIF16BQ96L93 1317 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 RLFQ13129 1914 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 GRM8O00222 908 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 PDE8BO95263 885 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 LDHBP07195 334 aaKnown RBP11.6□□□□□ -0.55
GGA3-212ENST00000582376 IFIT1P09914 478 aaKnown RBP11.6□□□□□ -0.55
GGA3-212ENST00000582376 PRDX5P30044 214 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 EPHB4P54760 987 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 HERVK_113P62684 666 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 ERVK-9P63128 1117 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 ERVK-24P63145 666 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 MAP2K5Q13163 448 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 RALBP1Q15311 655 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 BEND3Q5T5X7 828 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 EDC3Q96F86 508 aaKnown RBP11.6□□□□□ -0.55
GGA3-212ENST00000582376 PORCNQ9H237 461 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
GGA3-212ENST00000582376 LAMA2P24043 3122 aaKnown RBP11.6□□□□□ -0.55
GGA3-212ENST00000582376 USP17L5A8MUK1 530 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 TBC1D12O60347 775 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 BMP1P13497 986 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 IGFBP4P22692 258 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 HOXA7P31268 230 aaPredicted RBP11.59□□□□□ -0.55
GGA3-212ENST00000582376 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
GGA3-212ENST00000582376 Q3C1V9 767 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 LRRC24Q50LG9 513 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 VGLL2Q8N8G2 317 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 GTF3C2Q8WUA4 911 aaPredicted RBP11.59□□□□□ -0.55
GGA3-212ENST00000582376 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.59□□□□□ -0.55
GGA3-212ENST00000582376 AS3MTQ9HBK9 375 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 TMOD4Q9NZQ9 345 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 FLRT1Q9NZU1 646 aa11.59□□□□□ -0.55
GGA3-212ENST00000582376 CXXC1Q9P0U4 656 aaPredicted RBP11.59□□□□□ -0.55
GGA3-212ENST00000582376 RBPJLQ9UBG7 517 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms