RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 KRT26Q7Z3Y9 468 aa13.68□□□□□ -0.22
GGA3-211ENST00000582232 HOOK2Q96ED9 719 aa13.68□□□□□ -0.22
GGA3-211ENST00000582232 CSRNP1Q96S65 589 aa13.68□□□□□ -0.22
GGA3-211ENST00000582232 NBPF3Q9H094 633 aa13.68□□□□□ -0.22
GGA3-211ENST00000582232 HERC5Q9UII4 1024 aaKnown RBP13.68□□□□□ -0.22
GGA3-211ENST00000582232 KIF3CO14782 793 aa13.67□□□□□ -0.22
GGA3-211ENST00000582232 SLC3A2P08195 630 aaKnown RBP13.67□□□□□ -0.22
GGA3-211ENST00000582232 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
GGA3-211ENST00000582232 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
GGA3-211ENST00000582232 ZSCAN29Q8IWY8 852 aaPredicted RBP13.67□□□□□ -0.22
GGA3-211ENST00000582232 STAG1Q8WVM7 1258 aa13.67□□□□□ -0.22
GGA3-211ENST00000582232 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
GGA3-211ENST00000582232 SWAP70Q9UH65 585 aa13.67□□□□□ -0.22
GGA3-211ENST00000582232 SERPINB13Q9UIV8 391 aa13.67□□□□□ -0.22
GGA3-211ENST00000582232 CLEC11AQ9Y240 323 aa13.67□□□□□ -0.22
GGA3-211ENST00000582232 MYH8P13535 1937 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 HAND2P61296 217 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 EVX2Q03828 476 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 KRT32Q14532 448 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 SUPT20HL1Q3ZLR7 823 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 AKNAD1Q5T1N1 836 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 USP48Q86UV5 1035 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 RASEFQ8IZ41 740 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 RNF41Q9H4P4 317 aaPredicted RBP13.66□□□□□ -0.22
GGA3-211ENST00000582232 ZNF287Q9HBT7 754 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 SCAF8Q9UPN6 1271 aaKnown RBP13.66□□□□□ -0.22
GGA3-211ENST00000582232 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.66□□□□□ -0.22
GGA3-211ENST00000582232 SNX14Q9Y5W7 946 aa13.66□□□□□ -0.22
GGA3-211ENST00000582232 ADM5C9JUS6 153 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 E7EWF7 191 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 SMIM22K7EJ46 135 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 ORC4O43929 436 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 CDK8P49336 464 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 CTDSPL2Q05D32 466 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 PDE4BQ07343 736 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 NBPF12Q5TAG4 269 aaPredicted RBP13.65□□□□□ -0.22
GGA3-211ENST00000582232 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 TATDN1Q6P1N9 297 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 MFSD6Q6ZSS7 791 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 CDAN1Q8IWY9 1227 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 TBC1D32Q96NH3 1257 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 DNAJC18Q9H819 358 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 TACC3Q9Y6A5 838 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 TAF6LQ9Y6J9 622 aa13.65□□□□□ -0.22
GGA3-211ENST00000582232 SSC5DA1L4H1 1573 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 SLC4A8Q2Y0W8 1093 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 DCAF15Q66K64 600 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 MAP1SQ66K74 1059 aaPredicted RBP13.64□□□□□ -0.23
GGA3-211ENST00000582232 STOX1Q6ZVD7 989 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 CRACR2BQ8N4Y2 399 aaPredicted RBP13.64□□□□□ -0.23
GGA3-211ENST00000582232 CDCA5Q96FF9 252 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 DYNLL2Q96FJ2 89 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 GLIS2Q9BZE0 524 aaPredicted RBP13.64□□□□□ -0.23
GGA3-211ENST00000582232 TM6SF1Q9BZW5 370 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
GGA3-211ENST00000582232 CEP350Q5VT06 3117 aa13.63□□□□□ -0.23
GGA3-211ENST00000582232 ITGBL1O95965 494 aaPredicted RBP13.63□□□□□ -0.23
GGA3-211ENST00000582232 SHMT1P34896 483 aa13.63□□□□□ -0.23
GGA3-211ENST00000582232 KRT23Q9C075 422 aa13.63□□□□□ -0.23
GGA3-211ENST00000582232 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
GGA3-211ENST00000582232 ZNF112Q9UJU3 913 aa13.63□□□□□ -0.23
GGA3-211ENST00000582232 TRPM7Q96QT4 1865 aa13.63□□□□□ -0.23
GGA3-211ENST00000582232 GREB1LQ9C091 1923 aaPredicted RBP13.62□□□□□ -0.23
GGA3-211ENST00000582232 PHF20L1A8MW92 1017 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 RASA1P20936 1047 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 PSMA5P28066 241 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 NF2P35240 595 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 TRDNQ13061 729 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 PRAMEF18Q5VWM3 479 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 SLC44A5Q8NCS7 719 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 IL27Q8NEV9 243 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 NCOA7Q8NI08 942 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 RBM46Q8TBY0 533 aaKnown RBP13.62□□□□□ -0.23
GGA3-211ENST00000582232 CCDC17Q96LX7 622 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 KIF2CQ99661 725 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 ZNF341Q9BYN7 854 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 MKNK2Q9HBH9 465 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 INCENPQ9NQS7 918 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 NEDD4P46934 1319 aa13.62□□□□□ -0.23
GGA3-211ENST00000582232 PAPPA2Q9BXP8 1791 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 TOMM70O94826 608 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 HMGB1P09429 215 aaKnown RBP13.61□□□□□ -0.23
GGA3-211ENST00000582232 MAP3K11Q16584 847 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 ADCK5Q3MIX3 580 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 DLK2Q6UY11 383 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 MIGA2Q7L4E1 593 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 MB21D2Q8IYB1 491 aaPredicted RBP13.61□□□□□ -0.23
GGA3-211ENST00000582232 ZNF444Q8N0Y2 327 aaPredicted RBP13.61□□□□□ -0.23
GGA3-211ENST00000582232 SMC1BQ8NDV3 1235 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 ESR2Q92731 530 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 NEK1Q96PY6 1258 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 ZSWIM6Q9HCJ5 1215 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 GINM1Q9NU53 330 aa13.61□□□□□ -0.23
GGA3-211ENST00000582232 PLIN4Q96Q06 1357 aa13.6□□□□□ -0.23
GGA3-211ENST00000582232 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
GGA3-211ENST00000582232 PPP1R12BO60237 982 aaPredicted RBP13.6□□□□□ -0.23
GGA3-211ENST00000582232 USP2O75604 605 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms