RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	ATP8B2	P98198	1209 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	SPP2	Q13103	211 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	HABP4	Q5JVS0	413 aa	Known RBP	14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	ANKRD13C	Q8N6S4	541 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	SSH3	Q8TE77	659 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	GCC1	Q96CN9	775 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	SHISA4	Q96DD7	197 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	TLR7	Q9NYK1	1049 aa	Known RBP	14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	TAOK2	Q9UL54	1235 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	AGTPBP1	Q9UPW5	1226 aa		14.28	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	ATAD5	Q96QE3	1844 aa		14.27	□□□□□ -0.12
CDK5RAP3-223	ENST00000582114	TBC1D12	O60347	775 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	NPM3	O75607	178 aa	Known RBP	14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CYP2E1	P05181	493 aa	Predicted RBP	14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CCL5	P13501	91 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ZAP70	P43403	619 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	HMGCS2	P54868	508 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CCDC158	Q5M9N0	1113 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ADGRA1	Q86SQ6	560 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	MAPKAPK5	Q8IW41	473 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	TGFBRAP1	Q8WUH2	860 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CCDC8	Q9H0W5	538 aa	Predicted RBP	14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	RNF208	Q9H0X6	261 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	MYO5A	Q9Y4I1	1855 aa	Known RBP	14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	MAST2	Q6P0Q8	1798 aa		14.27	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	TNPO2	O14787	897 aa	Known RBP	14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ELN	P15502	786 aa		14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CAP2	P40123	477 aa		14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	FLT3LG	P49771	235 aa		14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	SHROOM1	Q2M3G4	852 aa	Predicted RBP	14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ZNF280C	Q8ND82	737 aa		14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	GPR108	Q9NPR9	543 aa		14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PIH1D3	Q9NQM4	214 aa	Known RBP	14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	SAP30BP	Q9UHR5	308 aa	Known RBP	14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	SLC45A1	Q9Y2W3	748 aa		14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	NDUFB9	Q9Y6M9	179 aa		14.26	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	COL2A1	P02458	1487 aa	Predicted RBP	14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	SIPA1L1	O43166	1804 aa		14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	FLT1	P17948	1338 aa		14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ADCY3	O60266	1144 aa		14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	BAG3	O95817	575 aa		14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	MAP4K4	O95819	1239 aa	Predicted RBP	14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	DYNLL1	P63167	89 aa	Known RBP	14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	UBXN2A	P68543	259 aa		14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	SLAIN1	Q8ND83	568 aa		14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	UNC93B1	Q9H1C4	597 aa		14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	DBNL	Q9UJU6	430 aa	Known RBP	14.25	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	USP17L5	A8MUK1	530 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114		H0YGN5	161 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ZBTB7B	O15156	539 aa	Predicted RBP	14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	GDF11	O95390	407 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	JAG1	P78504	1218 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PROCA1	Q8NCQ7	364 aa	Predicted RBP	14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	TRIM34	Q9BYJ4	488 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PI4KB	Q9UBF8	816 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	HERC5	Q9UII4	1024 aa	Known RBP	14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PNMA3	Q9UL41	463 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PALD1	Q9ULE6	856 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	LOC285556	D6RIA3	1793 aa		14.24	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CDK5RAP2	Q96SN8	1893 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	IDH1	O75874	414 aa	Known RBP	14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	INHA	P05111	366 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	GJB1	P08034	283 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PLCG2	P16885	1265 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CYP7A1	P22680	504 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	GJA8	P48165	433 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	MTMR2	Q13614	643 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	MIGA1	Q8NAN2	632 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PANK1	Q8TE04	598 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	DPF3	Q92784	378 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	EAF2	Q96CJ1	260 aa	Predicted RBP	14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	BCL11A	Q9H165	835 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	DNAJC18	Q9H819	358 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	COLQ	Q9Y215	455 aa	Predicted RBP	14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	EXOC6B	Q9Y2D4	811 aa		14.23	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PEX10	O60683	326 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PPP4C	P60510	307 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	FAM110C	Q1W6H9	321 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	DIEXF	Q68CQ4	756 aa	Known RBP	14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	CEP85	Q6P2H3	762 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	NKX2-3	Q8TAU0	364 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	U2AF1L4	Q8WU68	220 aa	Known RBP	14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	COA7	Q96BR5	231 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ASCC2	Q9H1I8	757 aa	Predicted RBP	14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	DHX36	Q9H2U1	1008 aa	Known RBP	14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	AS3MT	Q9HBK9	375 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PCDH10	Q9P2E7	1040 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	NOP58	Q9Y2X3	529 aa	Known RBP	14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	DOCK3	Q8IZD9	2030 aa		14.22	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	FOCAD	Q5VW36	1801 aa		14.21	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	PABPC4	Q13310	644 aa	Known RBP eCLIP	14.21	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	MAGEB6	Q8N7X4	407 aa		14.21	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	ANTXR1	Q9H6X2	564 aa		14.21	□□□□□ -0.13
CDK5RAP3-223	ENST00000582114	APBB1	O00213	710 aa		14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	FARP2	O94887	1054 aa	Predicted RBP	14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	HLA-DOA	P06340	250 aa		14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	IRX3	P78415	501 aa	Predicted RBP	14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	SH3D19	Q5HYK7	790 aa		14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	AACS	Q86V21	672 aa		14.2	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms