RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SLC10A4Q96EP9 437 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 TM6SF1Q9BZW5 370 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 CTNNA3Q9UI47 895 aa14.94□□□□□ -0.02
SRSF1-204ENST00000581979 HSP90AA1P07900 732 aaKnown RBP14.93□□□□□ -0.02
SRSF1-204ENST00000581979 IREB2P48200 963 aaKnown RBP14.93□□□□□ -0.02
SRSF1-204ENST00000581979 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
SRSF1-204ENST00000581979 TSGA10IPQ3SY00 556 aa14.93□□□□□ -0.02
SRSF1-204ENST00000581979 NAA16Q6N069 864 aaPredicted RBP14.93□□□□□ -0.02
SRSF1-204ENST00000581979 HHIPL2Q6UWX4 724 aa14.93□□□□□ -0.02
SRSF1-204ENST00000581979 CLMNQ96JQ2 1002 aa14.93□□□□□ -0.02
SRSF1-204ENST00000581979 LAMB1P07942 1786 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 MBD4O95243 580 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 CYP21A2P08686 494 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 ZBTB48P10074 688 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-204ENST00000581979 TNNI2P48788 182 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 DGKZQ13574 1117 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
SRSF1-204ENST00000581979 SPTY2D1Q68D10 685 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-204ENST00000581979 APOBEC3HQ6NTF7 200 aaKnown RBP14.92□□□□□ -0.02
SRSF1-204ENST00000581979 STRBPQ96SI9 672 aaKnown RBP14.92□□□□□ -0.02
SRSF1-204ENST00000581979 CFHR5Q9BXR6 569 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 SLKQ9H2G2 1235 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-204ENST00000581979 CYP46A1Q9Y6A2 500 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 RPAP1Q9BWH6 1393 aaPredicted RBP14.92□□□□□ -0.02
SRSF1-204ENST00000581979 TCP10L2B9ZVM9 353 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 APPP05067 770 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 INHBEP58166 350 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 FKBP1CQ5VVH2 108 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 ANKRD13AQ8IZ07 590 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 WNK4Q96J92 1243 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 ARMT1Q9H993 441 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 ZSWIM6Q9HCJ5 1215 aa14.92□□□□□ -0.02
SRSF1-204ENST00000581979 SALL1Q9NSC2 1324 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 LAMA4Q16363 1823 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 MANSC4A6NHS7 340 aaPredicted RBP14.91□□□□□ -0.02
SRSF1-204ENST00000581979 CPA1P15085 419 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 IMMTQ16891 758 aaKnown RBP14.91□□□□□ -0.02
SRSF1-204ENST00000581979 BLOC1S2Q6QNY1 142 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 NOL8Q76FK4 1167 aaKnown RBP14.91□□□□□ -0.02
SRSF1-204ENST00000581979 RUFY3Q7L099 469 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 FAM83AQ86UY5 434 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 CDAN1Q8IWY9 1227 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 MIGA1Q8NAN2 632 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 TMEM39BQ9GZU3 492 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 PDRG1Q9NUG6 133 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 TAF6LQ9Y6J9 622 aa14.91□□□□□ -0.02
SRSF1-204ENST00000581979 MAGEB6P1A0A0J9YX57 407 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 FOXP2O15409 715 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 FGAP02671 866 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 GNAT2P19087 354 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 PRDX5P30044 214 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 MECOMQ03112 1051 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 DZIP1Q86YF9 867 aaKnown RBP14.9□□□□□ -0.02
SRSF1-204ENST00000581979 LCORLQ8N3X6 602 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 NSUN4Q96CB9 384 aaKnown RBP14.9□□□□□ -0.02
SRSF1-204ENST00000581979 TTC14Q96N46 770 aa14.9□□□□□ -0.02
SRSF1-204ENST00000581979 PATL2C9JE40 543 aaKnown RBP14.89□□□□□ -0.03
SRSF1-204ENST00000581979 TBC1D8O95759 1140 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 LDHBP07195 334 aaKnown RBP14.89□□□□□ -0.03
SRSF1-204ENST00000581979 TMED8Q6PL24 325 aaPredicted RBP14.89□□□□□ -0.03
SRSF1-204ENST00000581979 ADGRA1Q86SQ6 560 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 NEK1Q96PY6 1258 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 FOXD4L1Q9NU39 408 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 TMOD2Q9NZR1 351 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 SLC4A4Q9Y6R1 1079 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 OTOFQ9HC10 1997 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 CCDC85CA6NKD9 419 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 ZNF213O14771 459 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 IGSF3O75054 1194 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 ALDH1A1P00352 501 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 RPS6KB1P23443 525 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 CACNB3P54284 484 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 AK2P54819 239 aa14.89□□□□□ -0.03
SRSF1-204ENST00000581979 CTU1Q7Z7A3 348 aaKnown RBP14.89□□□□□ -0.03
SRSF1-204ENST00000581979 GJA5P36382 358 aa14.88□□□□□ -0.03
SRSF1-204ENST00000581979 HAND2P61296 217 aa14.88□□□□□ -0.03
SRSF1-204ENST00000581979 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.88□□□□□ -0.03
SRSF1-204ENST00000581979 IFNL1Q8IU54 200 aa14.88□□□□□ -0.03
SRSF1-204ENST00000581979 IFNL3Q8IZI9 196 aa14.88□□□□□ -0.03
SRSF1-204ENST00000581979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.88□□□□□ -0.03
SRSF1-204ENST00000581979 ZNF384Q8TF68 577 aa14.88□□□□□ -0.03
SRSF1-204ENST00000581979 ZNF296Q8WUU4 475 aaPredicted RBP14.88□□□□□ -0.03
SRSF1-204ENST00000581979 TMX3Q96JJ7 454 aa14.88□□□□□ -0.03
SRSF1-204ENST00000581979 NACAP1Q9BZK3 213 aa14.88□□□□□ -0.03
SRSF1-204ENST00000581979 TESPA1A2RU30 521 aaPredicted RBP14.87□□□□□ -0.03
SRSF1-204ENST00000581979 E7EWF7 191 aa14.87□□□□□ -0.03
SRSF1-204ENST00000581979 GPR25O00155 361 aa14.87□□□□□ -0.03
SRSF1-204ENST00000581979 GSTO1P78417 241 aa14.87□□□□□ -0.03
SRSF1-204ENST00000581979 STOX1Q6ZVD7 989 aa14.87□□□□□ -0.03
SRSF1-204ENST00000581979 NAPBQ9H115 298 aa14.87□□□□□ -0.03
SRSF1-204ENST00000581979 DAGLAQ9Y4D2 1042 aa14.87□□□□□ -0.03
SRSF1-204ENST00000581979 ZMYM6O95789 1325 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 PRKAB2O43741 272 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 HMGB1P09429 215 aaKnown RBP14.86□□□□□ -0.03
SRSF1-204ENST00000581979 TDO2P48775 406 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 DYNLL1P63167 89 aaKnown RBP14.86□□□□□ -0.03
SRSF1-204ENST00000581979 MAP3K9P80192 1104 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 DIXDC1Q155Q3 683 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 ALX1Q15699 326 aa14.86□□□□□ -0.03
SRSF1-204ENST00000581979 HOOK2Q96ED9 719 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms