RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 PTPRAP18433 802 aa12.44□□□□□ -0.42
PPP4R1-220ENST00000581835 ADD2P35612 726 aa12.44□□□□□ -0.42
PPP4R1-220ENST00000581835 METTL16Q86W50 562 aaKnown RBP12.44□□□□□ -0.42
PPP4R1-220ENST00000581835 FAM43AQ8N2R8 423 aa12.44□□□□□ -0.42
PPP4R1-220ENST00000581835 PICK1Q9NRD5 415 aa12.44□□□□□ -0.42
PPP4R1-220ENST00000581835 PALD1Q9ULE6 856 aa12.44□□□□□ -0.42
PPP4R1-220ENST00000581835 MAGEB6P1A0A0J9YX57 407 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 BTBD19C9JJ37 291 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 USP5P45974 858 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 CRHR2Q13324 411 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 DGKZQ13574 1117 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 RRP1BQ14684 758 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 SLFNL1Q499Z3 407 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 TSHZ3Q63HK5 1081 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 FOXP4Q8IVH2 680 aaPredicted RBP12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 EXOC6Q8TAG9 804 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 GCC1Q96CN9 775 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 GPATCH3Q96I76 525 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 SAP30BPQ9UHR5 308 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 HERC5Q9UII4 1024 aaKnown RBP12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 AFG3L2Q9Y4W6 797 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 ZHX2Q9Y6X8 837 aa12.43□□□□□ -0.42
PPP4R1-220ENST00000581835 NAV1Q8NEY1 1877 aa12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 CXCL11O14625 94 aa12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 FKTNO75072 461 aa12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 CHGBP05060 677 aa12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 CAP2P40123 477 aa12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 MOGSQ13724 837 aa12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 OTUD7AQ8TE49 926 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.42□□□□□ -0.423e-7■■■□□ 15.9
PPP4R1-220ENST00000581835 DNAJC18Q9H819 358 aa12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 BAZ2AQ9UIF9 1905 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 DDX60LQ5H9U9 1706 aaKnown RBP12.42□□□□□ -0.42
PPP4R1-220ENST00000581835 TTC41PQ6P2S7 1318 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 HLA-DOAP06340 250 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 UBE3CQ15386 1083 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 TAF1CQ15572 869 aaPredicted RBP12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 ANKRD45Q5TZF3 282 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 CTU1Q7Z7A3 348 aaKnown RBP12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 ABHD8Q96I13 439 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 ZFYVE28Q9HCC9 887 aa12.41□□□□□ -0.42
PPP4R1-220ENST00000581835 SALL3Q9BXA9 1300 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 A0A0G2JLL6 359 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 ERC2O15083 957 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 CAPN15O75808 1086 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 ZSCAN25Q6NSZ9 544 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 PRRT2Q7Z6L0 340 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 ANKRD23Q86SG2 305 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 TTC6Q86TZ1 520 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 CCDC84Q86UT8 332 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 KBTBD3Q8NAB2 608 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 SDR42E1Q8WUS8 393 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 TRIM34Q9BYJ4 488 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 ARMT1Q9H993 441 aa12.4□□□□□ -0.42
PPP4R1-220ENST00000581835 TRIM75PA6NK02 468 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 TLR2O60603 784 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 MBD4O95243 580 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 MX1P20591 662 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 PLCD1P51178 756 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 JAG1P78504 1218 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 GPAT2Q6NUI2 795 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 SMC5Q8IY18 1101 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 PUS7LQ9H0K6 701 aaKnown RBP12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 EHD4Q9H223 541 aa12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 RWDD1Q9H446 243 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 DCP1AQ9NPI6 582 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
PPP4R1-220ENST00000581835 USP17L5A8MUK1 530 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 PDHXO00330 501 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 PRKAB2O43741 272 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 GLRX3O76003 335 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 GDF11O95390 407 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 IGHDP01880 384 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 POLR3DP05423 398 aaPredicted RBP12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 ASNSP08243 561 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 SP3Q02447 781 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 SPP2Q13103 211 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 PKN2Q16513 984 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 TATDN1Q6P1N9 297 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 FASTKD5Q7L8L6 764 aaKnown RBP12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 ZNF280CQ8ND82 737 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 TBC1D2Q9BYX2 928 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 MCM9Q9NXL9 1143 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 SERPINB13Q9UIV8 391 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 MYH8P13535 1937 aa12.38□□□□□ -0.43
PPP4R1-220ENST00000581835 RNF113AO15541 343 aaKnown RBP12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 GABPAQ06546 454 aa12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 SHROOM1Q2M3G4 852 aaPredicted RBP12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 GADL1Q6ZQY3 521 aa12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 CD99L2Q8TCZ2 262 aa12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 ERO1AQ96HE7 468 aa12.37□□□□□ -0.43
PPP4R1-220ENST00000581835 ATP8A2Q9NTI2 1148 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms