RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CDK5RAP2Q96SN8 1893 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 MANSC4A6NHS7 340 aaPredicted RBP16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 TCP10L2B9ZVM9 353 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 ENTPD3O75355 529 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 CDC45O75419 566 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 ALDH1A1P00352 501 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 FXR1P51114 621 aaKnown RBP eCLIP16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 RHBDL3P58872 404 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 MIGA1Q8NAN2 632 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 HOOK2Q96ED9 719 aa16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 IPO9Q96P70 1041 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
CSNK1D-220ENST00000581737 CACNB3P54284 484 aa16.16■□□□□ 0.18
CSNK1D-220ENST00000581737 RASA3Q14644 834 aa16.16■□□□□ 0.18
CSNK1D-220ENST00000581737 NBPF12Q5TAG4 269 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-220ENST00000581737 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-220ENST00000581737 FAM151AQ8WW52 585 aa16.16■□□□□ 0.18
CSNK1D-220ENST00000581737 COL2A1P02458 1487 aaPredicted RBP16.16■□□□□ 0.18
CSNK1D-220ENST00000581737 WDHD1O75717 1129 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 MBD4O95243 580 aa16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 ZBTB48P10074 688 aaPredicted RBP16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 GSPT1P15170 499 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 DYNLL1P63167 89 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 SUPT20HL1Q3ZLR7 823 aa16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 CDAN1Q8IWY9 1227 aa16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 ARMC5Q96C12 935 aa16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 RIOK1Q9BRS2 568 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 DIAPH3Q9NSV4 1193 aa16.15■□□□□ 0.18
CSNK1D-220ENST00000581737 NAV1Q8NEY1 1877 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 USP2O75604 605 aaPredicted RBP16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 SDSP20132 328 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 USP5P45974 858 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 INHBEP58166 350 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 NFIAQ12857 509 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 PICALMQ13492 652 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 ZMYM1Q5SVZ6 1142 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 FAM198AQ9UFP1 575 aa16.14■□□□□ 0.17
CSNK1D-220ENST00000581737 RANBP2P49792 3224 aaKnown RBP16.13■□□□□ 0.17
CSNK1D-220ENST00000581737 GNAT2P19087 354 aa16.13■□□□□ 0.17
CSNK1D-220ENST00000581737 TCP10Q12799 353 aa16.13■□□□□ 0.17
CSNK1D-220ENST00000581737 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
CSNK1D-220ENST00000581737 ARMT1Q9H993 441 aa16.13■□□□□ 0.17
CSNK1D-220ENST00000581737 EFCC1Q9HA90 598 aa16.13■□□□□ 0.17
CSNK1D-220ENST00000581737 HELLSQ9NRZ9 838 aa16.13■□□□□ 0.17
CSNK1D-220ENST00000581737 MYH1P12882 1939 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 MFAP1P55081 439 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 BECN1Q14457 450 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 ZSCAN29Q8IWY8 852 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 TGFBRAP1Q8WUH2 860 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 OSBP2Q969R2 916 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 ERO1AQ96HE7 468 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 TMEM39BQ9GZU3 492 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 PUS7LQ9H0K6 701 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 OSBPL5Q9H0X9 879 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 DHX36Q9H2U1 1008 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 COLQQ9Y215 455 aaPredicted RBP16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 FLT1P17948 1338 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 ATRNL1Q5VV63 1379 aa16.12■□□□□ 0.17
CSNK1D-220ENST00000581737 TESPA1A2RU30 521 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 GPAA1O43292 621 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 PPP1R12BO60237 982 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 CHGBP05060 677 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 SLFNL1Q499Z3 407 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 DCAF15Q66K64 600 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 ZNF333Q96JL9 665 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 MS4A4AQ96JQ5 239 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 TEPSINQ96N21 525 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 ELP3Q9H9T3 547 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 DDX4Q9NQI0 724 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 ATP8A2Q9NTI2 1148 aa16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 DDX60LQ5H9U9 1706 aaKnown RBP16.11■□□□□ 0.17
CSNK1D-220ENST00000581737 MYCP01106 439 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 SP3Q02447 781 aa16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 NMIQ13287 307 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 MCMDC2Q4G0Z9 681 aa16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 AMOTL1Q8IY63 956 aa16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 STRBPQ96SI9 672 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 PTCH2Q9Y6C5 1203 aa16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 SLC4A4Q9Y6R1 1079 aa16.1■□□□□ 0.17
CSNK1D-220ENST00000581737 M0R2C6 588 aa16.09■□□□□ 0.17
CSNK1D-220ENST00000581737 HLA-DOAP06340 250 aa16.09■□□□□ 0.17
CSNK1D-220ENST00000581737 GIMAP6Q6P9H5 292 aa16.09■□□□□ 0.17
CSNK1D-220ENST00000581737 BRI3BPQ8WY22 251 aa16.09■□□□□ 0.17
CSNK1D-220ENST00000581737 OPTNQ96CV9 577 aa16.09■□□□□ 0.17
CSNK1D-220ENST00000581737 FAM227BQ96M60 508 aa16.09■□□□□ 0.17
CSNK1D-220ENST00000581737 RAD50Q92878 1312 aa16.09■□□□□ 0.17
CSNK1D-220ENST00000581737 RBBP6Q7Z6E9 1792 aaKnown RBP16.08■□□□□ 0.17
CSNK1D-220ENST00000581737 BAZ2AQ9UIF9 1905 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 A0A0D9SFI3 127 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 ANKRD13AQ8IZ07 590 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 SDR42E1Q8WUS8 393 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 TBC1D32Q96NH3 1257 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 SEC62Q99442 399 aaKnown RBP16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 NACAP1Q9BZK3 213 aa16.08■□□□□ 0.16
CSNK1D-220ENST00000581737 ARHGAP39Q9C0H5 1083 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms