RNA–Protein interactions for RNA: ENST00000580920.1

MIR4258-201, Transcript of microRNA 4258, humanhuman

BASIC

Gene MIR4258, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4258-201ENST00000580920 HMGCS2P54868 508 aa9.91□□□□□ -0.82
MIR4258-201ENST00000580920 FKBP5Q13451 457 aaPredicted RBP9.91□□□□□ -0.82
MIR4258-201ENST00000580920 TRIM60Q495X7 471 aa9.91□□□□□ -0.82
MIR4258-201ENST00000580920 VGLL2Q8N8G2 317 aa9.91□□□□□ -0.82
MIR4258-201ENST00000580920 PROCA1Q8NCQ7 364 aaPredicted RBP9.91□□□□□ -0.82
MIR4258-201ENST00000580920 ATXN2LQ8WWM7 1075 aaKnown RBP9.91□□□□□ -0.82
MIR4258-201ENST00000580920 USP6NLQ92738 828 aa9.91□□□□□ -0.82
MIR4258-201ENST00000580920 SNX27Q96L92 541 aa9.91□□□□□ -0.82
MIR4258-201ENST00000580920 RNPC3Q96LT9 517 aaKnown RBP9.91□□□□□ -0.82
MIR4258-201ENST00000580920 MORF4L1Q9UBU8 362 aa9.91□□□□□ -0.82
MIR4258-201ENST00000580920 WDFY4Q6ZS81 3184 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 TRIM43BA6NCK2 446 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 XRCC5P13010 732 aaKnown RBP9.9□□□□□ -0.82
MIR4258-201ENST00000580920 ITGB8P26012 769 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 LRRC24Q50LG9 513 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 TRIM43Q96BQ3 446 aaPredicted RBP9.9□□□□□ -0.82
MIR4258-201ENST00000580920 APBA2Q99767 749 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 NUDT12Q9BQG2 462 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 MRIQ9BWK5 157 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 PORCNQ9H237 461 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 DDX4Q9NQI0 724 aaKnown RBP9.9□□□□□ -0.82
MIR4258-201ENST00000580920 FLRT1Q9NZU1 646 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 HCN4Q9Y3Q4 1203 aa9.9□□□□□ -0.82
MIR4258-201ENST00000580920 LRRFIP2Q9Y608 721 aaKnown RBP9.9□□□□□ -0.82
MIR4258-201ENST00000580920 TRANK1O15050 2925 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 F6X3S4 739 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 SLC4A2P04920 1241 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 SPP2Q13103 211 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 LRFN3Q9BTN0 628 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 USP40Q9NVE5 1235 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 ADAMTS8Q9UP79 889 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 SUGT1Q9Y2Z0 365 aa9.89□□□□□ -0.83
MIR4258-201ENST00000580920 MROH5Q6ZUA9 1318 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 DNM1LO00429 736 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 CTNND1O60716 968 aaKnown RBP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 MRPS5P82675 430 aaKnown RBP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 ADGRE1Q14246 886 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 PDE3AQ14432 1141 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 WDR43Q15061 677 aaKnown RBP eCLIP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 CCDC85BQ15834 202 aaPredicted RBP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 CAVIN4Q5BKX8 364 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 METTL24Q5JXM2 366 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 MORN1Q5T089 497 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 GJC2Q5T442 439 aaPredicted RBP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 ALYREFQ86V81 257 aaKnown RBP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 TRPV1Q8NER1 839 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 KAZALD1Q96I82 304 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 SUCLG2Q96I99 432 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 C1QTNF1Q9BXJ1 281 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 PRDM12Q9H4Q4 367 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 ZNF576Q9H609 170 aa9.88□□□□□ -0.83
MIR4258-201ENST00000580920 DDX20Q9UHI6 824 aaKnown RBP9.88□□□□□ -0.83
MIR4258-201ENST00000580920 SIPA1L1O43166 1804 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 FAM86C2PA6NEL3 165 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 APAF1O14727 1248 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 RGS2P41220 211 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 MAP3K10Q02779 954 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 PICALMQ13492 652 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 RRP1BQ14684 758 aaKnown RBP9.87□□□□□ -0.83
MIR4258-201ENST00000580920 SNX17Q15036 470 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 TWISTNBQ3B726 338 aaPredicted RBP9.87□□□□□ -0.83
MIR4258-201ENST00000580920 BEND3Q5T5X7 828 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 GPR142Q7Z601 462 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 TIFAQ96CG3 184 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 EPHX3Q9H6B9 360 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 C11orf16Q9NQ32 467 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 NDUFB9Q9Y6M9 179 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 NCOR1O75376 2440 aa9.87□□□□□ -0.83
MIR4258-201ENST00000580920 GRM8O00222 908 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 ENTPD3O75355 529 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 CNGA1P29973 690 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 PBX2P40425 430 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 KCNQ1P51787 676 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 HERVK_113P62684 666 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 IRX3P78415 501 aaPredicted RBP9.86□□□□□ -0.83
MIR4258-201ENST00000580920 TFF2Q03403 129 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 MTMR2Q13614 643 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 SHROOM1Q2M3G4 852 aaPredicted RBP9.86□□□□□ -0.83
MIR4258-201ENST00000580920 AKNAD1Q5T1N1 836 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 ANO1Q5XXA6 986 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 SLC39A5Q6ZMH5 540 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 TRMT44Q8IYL2 757 aaKnown RBP9.86□□□□□ -0.83
MIR4258-201ENST00000580920 ZNF280CQ8ND82 737 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 KLHDC4Q8TBB5 520 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 LPAR1Q92633 364 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 KHSRPQ92945 711 aaKnown RBP eCLIP9.86□□□□□ -0.83
MIR4258-201ENST00000580920 GAS2L1Q99501 681 aaPredicted RBP9.86□□□□□ -0.83
MIR4258-201ENST00000580920 PAGR1Q9BTK6 254 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 IDI2Q9BXS1 227 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 ARIH1Q9Y4X5 557 aaPredicted RBP9.86□□□□□ -0.83
MIR4258-201ENST00000580920 MUC6Q6W4X9 2439 aa9.86□□□□□ -0.83
MIR4258-201ENST00000580920 UTYO14607 1347 aa9.85□□□□□ -0.83
MIR4258-201ENST00000580920 GAKO14976 1311 aa9.85□□□□□ -0.83
MIR4258-201ENST00000580920 KIF16BQ96L93 1317 aa9.85□□□□□ -0.83
MIR4258-201ENST00000580920 LRRC37A2A6NM11 1700 aa9.85□□□□□ -0.83
MIR4258-201ENST00000580920 PDE8BO95263 885 aa9.85□□□□□ -0.83
MIR4258-201ENST00000580920 FGFR2P21802 821 aa9.85□□□□□ -0.83
MIR4258-201ENST00000580920 MAPK4P31152 587 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms