RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 RNF208Q9H0X6 261 aa25.58■■□□□ 1.69
SNX11-207ENST00000580875 PTPRFP10586 1907 aa25.57■■□□□ 1.68
SNX11-207ENST00000580875 POLA2Q14181 598 aa25.57■■□□□ 1.68
SNX11-207ENST00000580875 PROCA1Q8NCQ7 364 aaPredicted RBP25.57■■□□□ 1.68
SNX11-207ENST00000580875 TBC1D2Q9BYX2 928 aa25.57■■□□□ 1.68
SNX11-207ENST00000580875 GPR108Q9NPR9 543 aa25.57■■□□□ 1.68
SNX11-207ENST00000580875 PNMA3Q9UL41 463 aa25.57■■□□□ 1.68
SNX11-207ENST00000580875 TNPO2O14787 897 aaKnown RBP25.56■■□□□ 1.68
SNX11-207ENST00000580875 TREML2Q5T2D2 321 aa25.56■■□□□ 1.68
SNX11-207ENST00000580875 ZNF280CQ8ND82 737 aa25.56■■□□□ 1.68
SNX11-207ENST00000580875 SH3RF3Q8TEJ3 882 aaPredicted RBP25.56■■□□□ 1.68
SNX11-207ENST00000580875 MGAMO43451 1857 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 H0YGN5 161 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 ADCY3O60266 1144 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 BAG3O95817 575 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 CAP2P40123 477 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 FLT3LGP49771 235 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 SPP2Q13103 211 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 TNNI3KQ59H18 835 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 CCDC158Q5M9N0 1113 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 TTC39AQ5SRH9 613 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 NAA16Q6N069 864 aaPredicted RBP25.55■■□□□ 1.68
SNX11-207ENST00000580875 ANKRD13CQ8N6S4 541 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 HERC5Q9UII4 1024 aaKnown RBP25.55■■□□□ 1.68
SNX11-207ENST00000580875 FPGT-TNNI3KV9GXZ4 949 aa25.55■■□□□ 1.68
SNX11-207ENST00000580875 PLCG2P16885 1265 aa25.54■■□□□ 1.68
SNX11-207ENST00000580875 OS9Q13438 667 aaPredicted RBP25.54■■□□□ 1.68
SNX11-207ENST00000580875 IRF5Q13568 498 aa25.54■■□□□ 1.68
SNX11-207ENST00000580875 SSH3Q8TE77 659 aa25.54■■□□□ 1.68
SNX11-207ENST00000580875 PXYLP1Q8TE99 480 aa25.54■■□□□ 1.68
SNX11-207ENST00000580875 DHX36Q9H2U1 1008 aaKnown RBP25.54■■□□□ 1.68
SNX11-207ENST00000580875 SNRKQ9NRH2 765 aa25.54■■□□□ 1.68
SNX11-207ENST00000580875 PI4KBQ9UBF8 816 aa25.54■■□□□ 1.68
SNX11-207ENST00000580875 COLQQ9Y215 455 aaPredicted RBP25.54■■□□□ 1.68
SNX11-207ENST00000580875 ATP8B2P98198 1209 aa25.53■■□□□ 1.68
SNX11-207ENST00000580875 FAM110CQ1W6H9 321 aa25.53■■□□□ 1.68
SNX11-207ENST00000580875 UBE2Q1Q7Z7E8 422 aa25.53■■□□□ 1.68
SNX11-207ENST00000580875 DPF3Q92784 378 aa25.53■■□□□ 1.68
SNX11-207ENST00000580875 DBNDD2Q9BQY9 259 aa25.53■■□□□ 1.68
SNX11-207ENST00000580875 UNC93B1Q9H1C4 597 aa25.53■■□□□ 1.68
SNX11-207ENST00000580875 AATFQ9NY61 560 aaKnown RBP eCLIP25.53■■□□□ 1.68
SNX11-207ENST00000580875 ZBED9Q6R2W3 1325 aa25.53■■□□□ 1.68
SNX11-207ENST00000580875 USP17L5A8MUK1 530 aa25.52■■□□□ 1.68
SNX11-207ENST00000580875 HMGCS2P54868 508 aa25.52■■□□□ 1.68
SNX11-207ENST00000580875 PABPC4Q13310 644 aaKnown RBP eCLIP25.52■■□□□ 1.68
SNX11-207ENST00000580875 RRP1BQ14684 758 aaKnown RBP25.52■■□□□ 1.68
SNX11-207ENST00000580875 U2AF1L4Q8WU68 220 aaKnown RBP25.52■■□□□ 1.68
SNX11-207ENST00000580875 COA7Q96BR5 231 aa25.52■■□□□ 1.68
SNX11-207ENST00000580875 SURF6O75683 361 aaKnown RBP25.51■■□□□ 1.67
SNX11-207ENST00000580875 INHAP05111 366 aa25.51■■□□□ 1.67
SNX11-207ENST00000580875 ELNP15502 786 aa25.51■■□□□ 1.67
SNX11-207ENST00000580875 FXR1P51114 621 aaKnown RBP eCLIP25.51■■□□□ 1.67
SNX11-207ENST00000580875 ZNF512BQ96KM6 892 aaPredicted RBP25.51■■□□□ 1.67
SNX11-207ENST00000580875 AS3MTQ9HBK9 375 aa25.51■■□□□ 1.67
SNX11-207ENST00000580875 IGSF3O75054 1194 aa25.5■■□□□ 1.67
SNX11-207ENST00000580875 CYP2E1P05181 493 aaPredicted RBP25.5■■□□□ 1.67
SNX11-207ENST00000580875 GCLCP48506 637 aaPredicted RBP25.5■■□□□ 1.67
SNX11-207ENST00000580875 PPP4CP60510 307 aa25.5■■□□□ 1.67
SNX11-207ENST00000580875 MAST2Q6P0Q8 1798 aa25.5■■□□□ 1.67
SNX11-207ENST00000580875 FTSJ3Q8IY81 847 aaKnown RBP25.5■■□□□ 1.67
SNX11-207ENST00000580875 HTATIP2Q9BUP3 242 aa25.5■■□□□ 1.67
SNX11-207ENST00000580875 LOC285556D6RIA3 1793 aa25.49■■□□□ 1.67
SNX11-207ENST00000580875 SH3D19Q5HYK7 790 aa25.49■■□□□ 1.67
SNX11-207ENST00000580875 ADGRA1Q86SQ6 560 aa25.49■■□□□ 1.67
SNX11-207ENST00000580875 TGFBRAP1Q8WUH2 860 aa25.49■■□□□ 1.67
SNX11-207ENST00000580875 C1orf115Q9H7X2 142 aa25.49■■□□□ 1.67
SNX11-207ENST00000580875 FLT1P17948 1338 aa25.48■■□□□ 1.67
SNX11-207ENST00000580875 FARP2O94887 1054 aaPredicted RBP25.48■■□□□ 1.67
SNX11-207ENST00000580875 SGPL1O95470 568 aa25.48■■□□□ 1.67
SNX11-207ENST00000580875 MAPKAPK5Q8IW41 473 aa25.48■■□□□ 1.67
SNX11-207ENST00000580875 ASCC2Q9H1I8 757 aaPredicted RBP25.48■■□□□ 1.67
SNX11-207ENST00000580875 TAOK2Q9UL54 1235 aa25.48■■□□□ 1.67
SNX11-207ENST00000580875 NOP58Q9Y2X3 529 aaKnown RBP25.48■■□□□ 1.67
SNX11-207ENST00000580875 CEP290O15078 2479 aa25.48■■□□□ 1.67
SNX11-207ENST00000580875 ATAD5Q96QE3 1844 aa25.47■■□□□ 1.67
SNX11-207ENST00000580875 ASNSP08243 561 aa25.47■■□□□ 1.67
SNX11-207ENST00000580875 METTL16Q86W50 562 aaKnown RBP25.47■■□□□ 1.67
SNX11-207ENST00000580875 ITPRIPQ8IWB1 547 aa25.47■■□□□ 1.67
SNX11-207ENST00000580875 WDR18Q9BV38 432 aa25.47■■□□□ 1.67
SNX11-207ENST00000580875 CAPN2P17655 700 aa25.46■■□□□ 1.67
SNX11-207ENST00000580875 ZAP70P43403 619 aa25.46■■□□□ 1.67
SNX11-207ENST00000580875 FOXP4Q8IVH2 680 aaPredicted RBP25.46■■□□□ 1.67
SNX11-207ENST00000580875 CRACR2BQ8N4Y2 399 aaPredicted RBP25.46■■□□□ 1.67
SNX11-207ENST00000580875 TRIM34Q9BYJ4 488 aa25.46■■□□□ 1.67
SNX11-207ENST00000580875 DBNLQ9UJU6 430 aaKnown RBP25.46■■□□□ 1.67
SNX11-207ENST00000580875 MTMR2Q13614 643 aa25.45■■□□□ 1.66
SNX11-207ENST00000580875 DEFB118Q96PH6 123 aa25.45■■□□□ 1.66
SNX11-207ENST00000580875 DNAJC18Q9H819 358 aa25.45■■□□□ 1.66
SNX11-207ENST00000580875 PIH1D3Q9NQM4 214 aaKnown RBP25.45■■□□□ 1.66
SNX11-207ENST00000580875 PAK6Q9NQU5 681 aaPredicted RBP25.45■■□□□ 1.66
SNX11-207ENST00000580875 ZBTB7BO15156 539 aaPredicted RBP25.44■■□□□ 1.66
SNX11-207ENST00000580875 TFRCP02786 760 aaKnown RBP25.44■■□□□ 1.66
SNX11-207ENST00000580875 BACE1P56817 501 aa25.44■■□□□ 1.66
SNX11-207ENST00000580875 CHRDL2Q6WN34 429 aa25.44■■□□□ 1.66
SNX11-207ENST00000580875 GINM1Q9NU53 330 aa25.44■■□□□ 1.66
SNX11-207ENST00000580875 TLR7Q9NYK1 1049 aaKnown RBP25.44■■□□□ 1.66
SNX11-207ENST00000580875 TMOD4Q9NZQ9 345 aa25.44■■□□□ 1.66
SNX11-207ENST00000580875 PALD1Q9ULE6 856 aa25.44■■□□□ 1.66
SNX11-207ENST00000580875 SIPA1L1O43166 1804 aa25.44■■□□□ 1.66
SNX11-207ENST00000580875 RLBP1P12271 317 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms