RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 SEC23AQ15436 765 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 SBK1Q52WX2 424 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 ILDR1Q86SU0 546 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 SP8Q8IXZ3 490 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 AMOTL1Q8IY63 956 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 CCDC144CPQ8IYA2 1237 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 TRIM22Q8IYM9 498 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 BICD2Q8TD16 824 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 ANP32BQ92688 251 aaKnown RBP7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 ZKSCAN3Q9BRR0 538 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 ALG1Q9BT22 464 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 MYL10Q9BUA6 226 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 RTFDC1Q9BY42 306 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 NUP62CLQ9H1M0 184 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 DCP1AQ9NPI6 582 aaPredicted RBP7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 INCENPQ9NQS7 918 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 DDX19AQ9NUU7 478 aaKnown RBP7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 TFIP11Q9UBB9 837 aaKnown RBP7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 ATP6V0A2Q9Y487 856 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 PARP3Q9Y6F1 533 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 TCHHQ07283 1943 aa7.35□□□□□ -1.23
PPP4R1-217ENST00000580583 FOCADQ5VW36 1801 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 GAKO14976 1311 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 USP17L12C9JPN9 530 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 USP17L21D6R901 530 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 PRDM1O75626 825 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 CALM1P0DP23 149 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 CALM2P0DP24 149 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 CALM3P0DP25 149 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 CYP2D6P10635 497 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 ADD1P35611 737 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 BTDP43251 543 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 PDE4BQ07343 736 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 SSRP1Q08945 709 aaKnown RBP7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 CCDC173Q0VFZ6 552 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 DIXDC1Q155Q3 683 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 NTRK3Q16288 839 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 TPRNQ4KMQ1 711 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 MFSD14BQ5SR56 506 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 MSL1Q68DK7 614 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 CATIPQ7Z7H3 387 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 IQCA1Q86XH1 822 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 STK11IPQ8N1F8 1099 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 ENAHQ8N8S7 591 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 SH3RF3Q8TEJ3 882 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 PHKBQ93100 1093 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 MASTLQ96GX5 879 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 USP28Q96RU2 1077 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 ZSCAN10Q96SZ4 725 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 SLC26A6Q9BXS9 759 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 COA1Q9GZY4 146 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 TMX4Q9H1E5 349 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 RBSNQ9H1K0 784 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 FAM217BQ9NTX9 383 aaPredicted RBP7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 MCM9Q9NXL9 1143 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 POLLQ9UGP5 575 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 CDK5RAP2Q96SN8 1893 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 SNED1Q8TER0 1413 aa7.34□□□□□ -1.23
PPP4R1-217ENST00000580583 MYH2Q9UKX2 1941 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 KIF28PB7ZC32 967 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 DEXIO95424 95 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 YEATS4O95619 227 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 PLCG2P16885 1265 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 LIG1P18858 919 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 ALDH1B1P30837 517 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 PPP4CP60510 307 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 GNL2Q13823 731 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 PPP2R5BQ15173 497 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 GRIK5Q16478 980 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 MAP3K11Q16584 847 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 IFIT1BQ5T764 474 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 MYSM1Q5VVJ2 828 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 KRT40Q6A162 431 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 OTUD7BQ6GQQ9 843 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 STYK1Q6J9G0 422 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 DPP8Q6V1X1 898 aaPredicted RBP7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 CCDC73Q6ZRK6 1079 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 MPNDQ8N594 471 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 KCNG4Q8TDN1 519 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 NUP133Q8WUM0 1156 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 PGBD1Q96JS3 809 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 AIFM3Q96NN9 605 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 EYA3Q99504 573 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 FTOQ9C0B1 505 aaKnown RBP eCLIP7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 CLSTN2Q9H4D0 955 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 ANO8Q9HCE9 1232 aaPredicted RBP7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 POLR3EQ9NVU0 708 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 RBM28Q9NW13 759 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 STK32BQ9NY57 414 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 RTEL1Q9NZ71 1219 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 MKRN1Q9UHC7 482 aaKnown RBP7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 RCOR1Q9UKL0 485 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 C10orf71Q711Q0 1435 aa7.33□□□□□ -1.24
PPP4R1-217ENST00000580583 FLT1P17948 1338 aa7.32□□□□□ -1.24
PPP4R1-217ENST00000580583 GPR75-ASB3A0A0A6YYF3 556 aa7.32□□□□□ -1.24
PPP4R1-217ENST00000580583 SMIM22K7EJ46 135 aa7.32□□□□□ -1.24
PPP4R1-217ENST00000580583 USP17L8P0C7I0 530 aa7.32□□□□□ -1.24
PPP4R1-217ENST00000580583 ME1P48163 572 aa7.32□□□□□ -1.24
PPP4R1-217ENST00000580583 CEBPZQ03701 1054 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms