RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 ZSWIM8A7E2V4 1837 aa30.22■■■□□ 2.43
CDC42EP4-205ENST00000580315 PRMT2P55345 433 aa30.21■■■□□ 2.43
CDC42EP4-205ENST00000580315 NOL9Q5SY16 702 aaKnown RBP30.21■■■□□ 2.43
CDC42EP4-205ENST00000580315 TEX11Q8IYF3 940 aa30.21■■■□□ 2.43
CDC42EP4-205ENST00000580315 DDX4Q9NQI0 724 aaKnown RBP30.21■■■□□ 2.43
CDC42EP4-205ENST00000580315 ECM2O94769 699 aaPredicted RBP30.2■■■□□ 2.43
CDC42EP4-205ENST00000580315 CTGFP29279 349 aa30.2■■■□□ 2.43
CDC42EP4-205ENST00000580315 MOGSQ13724 837 aa30.2■■■□□ 2.43
CDC42EP4-205ENST00000580315 ANTXR1Q9H6X2 564 aa30.2■■■□□ 2.43
CDC42EP4-205ENST00000580315 AATFQ9NY61 560 aaKnown RBP eCLIP30.2■■■□□ 2.43
CDC42EP4-205ENST00000580315 MAST2Q6P0Q8 1798 aa30.19■■■□□ 2.42
CDC42EP4-205ENST00000580315 CYP7A1P22680 504 aa30.19■■■□□ 2.42
CDC42EP4-205ENST00000580315 PPP4CP60510 307 aa30.19■■■□□ 2.42
CDC42EP4-205ENST00000580315 DNAJC2Q99543 621 aaKnown RBP30.19■■■□□ 2.42
CDC42EP4-205ENST00000580315 ADGRA2Q96PE1 1338 aa30.19■■■□□ 2.42
CDC42EP4-205ENST00000580315 SMARCA5O60264 1052 aaPredicted RBP30.18■■■□□ 2.42
CDC42EP4-205ENST00000580315 PSMC4P43686 418 aa30.18■■■□□ 2.42
CDC42EP4-205ENST00000580315 AAMPQ13685 434 aa30.18■■■□□ 2.42
CDC42EP4-205ENST00000580315 TRIM47Q96LD4 638 aa30.18■■■□□ 2.42
CDC42EP4-205ENST00000580315 ATP5JP18859 108 aa30.17■■■□□ 2.42
CDC42EP4-205ENST00000580315 ADGRA1Q86SQ6 560 aa30.17■■■□□ 2.42
CDC42EP4-205ENST00000580315 CERS3Q8IU89 383 aa30.17■■■□□ 2.42
CDC42EP4-205ENST00000580315 MAGEB6Q8N7X4 407 aa30.17■■■□□ 2.42
CDC42EP4-205ENST00000580315 SH3RF3Q8TEJ3 882 aaPredicted RBP30.17■■■□□ 2.42
CDC42EP4-205ENST00000580315 SRRDQ9UH36 339 aa30.17■■■□□ 2.42
CDC42EP4-205ENST00000580315 SH3BP5LQ7L8J4 393 aa30.16■■■□□ 2.42
CDC42EP4-205ENST00000580315 DDTLA6NHG4 134 aaPredicted RBP30.15■■■□□ 2.42
CDC42EP4-205ENST00000580315 GOLIM4O00461 696 aa30.15■■■□□ 2.42
CDC42EP4-205ENST00000580315 OSBPL5Q9H0X9 879 aaPredicted RBP30.15■■■□□ 2.42
CDC42EP4-205ENST00000580315 ATRNL1Q5VV63 1379 aa30.15■■■□□ 2.42
CDC42EP4-205ENST00000580315 PHF20L1A8MW92 1017 aa30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 CXCL11O14625 94 aa30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 FMNL1O95466 1100 aaPredicted RBP30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 OSBPP22059 807 aa30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 HOXD10P28358 340 aa30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 GPAT2Q6NUI2 795 aa30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 GPATCH3Q96I76 525 aa30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 BOLA2Q9H3K6 86 aa30.14■■■□□ 2.42
CDC42EP4-205ENST00000580315 AK9Q5TCS8 1911 aa30.14■■■□□ 2.41
CDC42EP4-205ENST00000580315 PAG1Q9NWQ8 432 aa30.13■■■□□ 2.41
CDC42EP4-205ENST00000580315 COL2A1P02458 1487 aaPredicted RBP30.12■■■□□ 2.41
CDC42EP4-205ENST00000580315 MTFR1Q15390 333 aa30.12■■■□□ 2.41
CDC42EP4-205ENST00000580315 PARK7Q99497 189 aaKnown RBP30.12■■■□□ 2.41
CDC42EP4-205ENST00000580315 ECHDC1Q9NTX5 307 aa30.12■■■□□ 2.41
CDC42EP4-205ENST00000580315 SLC9C2Q5TAH2 1124 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 SCYL3Q8IZE3 742 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 MIGA1Q8NAN2 632 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 RAET1EQ8TD07 263 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 TGFBRAP1Q8WUH2 860 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 HAUS7Q99871 368 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 DHX36Q9H2U1 1008 aaKnown RBP30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 ZHX2Q9Y6X8 837 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 CEP290O15078 2479 aa30.11■■■□□ 2.41
CDC42EP4-205ENST00000580315 CYP2C8P10632 490 aa30.1■■■□□ 2.41
CDC42EP4-205ENST00000580315 BCRP11274 1271 aa30.1■■■□□ 2.41
CDC42EP4-205ENST00000580315 GRK4P32298 578 aa30.1■■■□□ 2.41
CDC42EP4-205ENST00000580315 DYNLL1P63167 89 aaKnown RBP30.1■■■□□ 2.41
CDC42EP4-205ENST00000580315 MAP3K10Q02779 954 aa30.1■■■□□ 2.41
CDC42EP4-205ENST00000580315 PICK1Q9NRD5 415 aa30.1■■■□□ 2.41
CDC42EP4-205ENST00000580315 ZBTB47Q9UFB7 747 aaPredicted RBP30.1■■■□□ 2.41
CDC42EP4-205ENST00000580315 TBC1D12O60347 775 aa30.09■■■□□ 2.41
CDC42EP4-205ENST00000580315 PDE6AP16499 860 aa30.09■■■□□ 2.41
CDC42EP4-205ENST00000580315 PTPRAP18433 802 aa30.09■■■□□ 2.41
CDC42EP4-205ENST00000580315 MYPNQ86TC9 1320 aa30.09■■■□□ 2.41
CDC42EP4-205ENST00000580315 MAPKAPK5Q8IW41 473 aa30.09■■■□□ 2.41
CDC42EP4-205ENST00000580315 SHISA4Q96DD7 197 aa30.09■■■□□ 2.41
CDC42EP4-205ENST00000580315 COLQQ9Y215 455 aaPredicted RBP30.09■■■□□ 2.41
CDC42EP4-205ENST00000580315 FLT1P17948 1338 aa30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 A0A0G2JLL6 359 aaPredicted RBP30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 FXR1P51114 621 aaKnown RBP eCLIP30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 FASTKD5Q7L8L6 764 aaKnown RBP30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 PRRT2Q7Z6L0 340 aaPredicted RBP30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 XPO5Q9HAV4 1204 aaKnown RBP eCLIP30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 SUPT16HQ9Y5B9 1047 aaKnown RBP30.08■■■□□ 2.41
CDC42EP4-205ENST00000580315 H0YGN5 161 aa30.07■■■□□ 2.4
CDC42EP4-205ENST00000580315 HDAC1Q13547 482 aaPredicted RBP30.07■■■□□ 2.4
CDC42EP4-205ENST00000580315 EDC3Q96F86 508 aaKnown RBP30.07■■■□□ 2.4
CDC42EP4-205ENST00000580315 AFG3L2Q9Y4W6 797 aa30.07■■■□□ 2.4
CDC42EP4-205ENST00000580315 DOCK2Q92608 1830 aa30.06■■■□□ 2.4
CDC42EP4-205ENST00000580315 SLURP2P0DP57 97 aa30.06■■■□□ 2.4
CDC42EP4-205ENST00000580315 FCGRTP55899 365 aa30.06■■■□□ 2.4
CDC42EP4-205ENST00000580315 PRKCZQ05513 592 aa30.06■■■□□ 2.4
CDC42EP4-205ENST00000580315 PI4KBQ9UBF8 816 aa30.06■■■□□ 2.4
CDC42EP4-205ENST00000580315 ZNF532Q9HCE3 1301 aa30.05■■■□□ 2.4
CDC42EP4-205ENST00000580315 MAGEB6P1A0A0J9YX57 407 aa30.05■■■□□ 2.4
CDC42EP4-205ENST00000580315 CTNND1O60716 968 aaKnown RBP30.05■■■□□ 2.4
CDC42EP4-205ENST00000580315 USP5P45974 858 aa30.05■■■□□ 2.4
CDC42EP4-205ENST00000580315 NKX2-3Q8TAU0 364 aa30.05■■■□□ 2.4
CDC42EP4-205ENST00000580315 HERC5Q9UII4 1024 aaKnown RBP30.05■■■□□ 2.4
CDC42EP4-205ENST00000580315 HLA-DOAP06340 250 aa30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 GJB1P08034 283 aa30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 CCL5P13501 91 aa30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 ZSCAN25Q6NSZ9 544 aa30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 GADL1Q6ZQY3 521 aa30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 RIOK1Q9BRS2 568 aaKnown RBP30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 TRIM34Q9BYJ4 488 aa30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 BIN2Q9UBW5 565 aaPredicted RBP30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 MYO5AQ9Y4I1 1855 aaKnown RBP30.03■■■□□ 2.4
CDC42EP4-205ENST00000580315 GJA8P48165 433 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms