RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-208ENST00000579466 SOX1O00570 391 aaPredicted RBP11.89□□□□□ -0.51
MSI2-208ENST00000579466 C7orf61Q8IZ16 206 aa11.89□□□□□ -0.51
MSI2-208ENST00000579466 PXYLP1Q8TE99 480 aa11.89□□□□□ -0.51
MSI2-208ENST00000579466 LRCH3Q96II8 777 aa11.89□□□□□ -0.51
MSI2-208ENST00000579466 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.89□□□□□ -0.51
MSI2-208ENST00000579466 HMG20BQ9P0W2 317 aa11.89□□□□□ -0.51
MSI2-208ENST00000579466 STAP2Q9UGK3 403 aa11.89□□□□□ -0.51
MSI2-208ENST00000579466 SLC45A1Q9Y2W3 748 aa11.89□□□□□ -0.51
MSI2-208ENST00000579466 GPR75-ASB3A0A0A6YYF3 556 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 PEX10O60683 326 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 MAP3K10Q02779 954 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 TRIM32Q13049 653 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 IRF5Q13568 498 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 RRP1BQ14684 758 aaKnown RBP11.88□□□□□ -0.51
MSI2-208ENST00000579466 FAM110CQ1W6H9 321 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 TEX11Q8IYF3 940 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 SPATA5Q8NB90 893 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 ZNF280CQ8ND82 737 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 OSBPL5Q9H0X9 879 aaPredicted RBP11.88□□□□□ -0.51
MSI2-208ENST00000579466 PRO3102Q9H379 93 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 PAK6Q9NQU5 681 aaPredicted RBP11.88□□□□□ -0.51
MSI2-208ENST00000579466 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
MSI2-208ENST00000579466 HDAC5Q9UQL6 1122 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 AKAP2Q9Y2D5 859 aa11.88□□□□□ -0.51
MSI2-208ENST00000579466 PDS5AQ29RF7 1337 aaKnown RBP11.87□□□□□ -0.51
MSI2-208ENST00000579466 HMGCRP04035 888 aa11.87□□□□□ -0.51
MSI2-208ENST00000579466 GSTO1P78417 241 aa11.87□□□□□ -0.51
MSI2-208ENST00000579466 MTMR2Q13614 643 aa11.87□□□□□ -0.51
MSI2-208ENST00000579466 PROCA1Q8NCQ7 364 aaPredicted RBP11.87□□□□□ -0.51
MSI2-208ENST00000579466 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
MSI2-208ENST00000579466 NSUN4Q96CB9 384 aaKnown RBP11.87□□□□□ -0.51
MSI2-208ENST00000579466 FAM163AQ96GL9 167 aaPredicted RBP11.87□□□□□ -0.51
MSI2-208ENST00000579466 ASCC2Q9H1I8 757 aaPredicted RBP11.87□□□□□ -0.51
MSI2-208ENST00000579466 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
MSI2-208ENST00000579466 TNNQ9UQP3 1299 aa11.87□□□□□ -0.51
MSI2-208ENST00000579466 FOCADQ5VW36 1801 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 LDHCP07864 332 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 SYN1P17600 705 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 CYP2B6P20813 491 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 CAP2P40123 477 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 MCAMP43121 646 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 IRX3P78415 501 aaPredicted RBP11.86□□□□□ -0.51
MSI2-208ENST00000579466 SHROOM1Q2M3G4 852 aaPredicted RBP11.86□□□□□ -0.51
MSI2-208ENST00000579466 NECAB2Q7Z6G3 386 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
MSI2-208ENST00000579466 AATFQ9NY61 560 aaKnown RBP eCLIP11.86□□□□□ -0.51
MSI2-208ENST00000579466 LRP2BPQ9P2M1 347 aa11.86□□□□□ -0.51
MSI2-208ENST00000579466 LAMA3Q16787 3333 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 USP17L5A8MUK1 530 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 TBC1D12O60347 775 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 GDF11O95390 407 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 GNAI3P08754 354 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 GCLCP48506 637 aaPredicted RBP11.85□□□□□ -0.51
MSI2-208ENST00000579466 PABPC4Q13310 644 aaKnown RBP eCLIP11.85□□□□□ -0.51
MSI2-208ENST00000579466 MAPKAPK5Q8IW41 473 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 TRIB2Q92519 343 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 FRAT1Q92837 279 aaPredicted RBP11.85□□□□□ -0.51
MSI2-208ENST00000579466 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 AS3MTQ9HBK9 375 aa11.85□□□□□ -0.51
MSI2-208ENST00000579466 COL2A1P02458 1487 aaPredicted RBP11.84□□□□□ -0.51
MSI2-208ENST00000579466 PNMA6EA0A0J9YXQ4 647 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 ARID4AP29374 1257 aaPredicted RBP11.84□□□□□ -0.51
MSI2-208ENST00000579466 RARSP54136 660 aaKnown RBP11.84□□□□□ -0.51
MSI2-208ENST00000579466 JAG1P78504 1218 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 G3BP1Q13283 466 aaKnown RBP eCLIP11.84□□□□□ -0.51
MSI2-208ENST00000579466 CRACR2BQ8N4Y2 399 aaPredicted RBP11.84□□□□□ -0.51
MSI2-208ENST00000579466 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 TGFBRAP1Q8WUH2 860 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 PAGR1Q9BTK6 254 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
MSI2-208ENST00000579466 TMOD4Q9NZQ9 345 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 SAP30BPQ9UHR5 308 aaKnown RBP11.84□□□□□ -0.51
MSI2-208ENST00000579466 MYH1P12882 1939 aa11.84□□□□□ -0.51
MSI2-208ENST00000579466 FRMPD3Q5JV73 1810 aa11.83□□□□□ -0.51
MSI2-208ENST00000579466 CT47B1P0C2W7 299 aaPredicted RBP11.83□□□□□ -0.52
MSI2-208ENST00000579466 PRKAR2AP13861 404 aaKnown RBP11.83□□□□□ -0.52
MSI2-208ENST00000579466 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
MSI2-208ENST00000579466 MTX1Q13505 466 aa11.83□□□□□ -0.52
MSI2-208ENST00000579466 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
MSI2-208ENST00000579466 NAA16Q6N069 864 aaPredicted RBP11.83□□□□□ -0.52
MSI2-208ENST00000579466 ADGRA1Q86SQ6 560 aa11.83□□□□□ -0.52
MSI2-208ENST00000579466 TRMT2AQ8IZ69 625 aaKnown RBP11.83□□□□□ -0.52
MSI2-208ENST00000579466 C11orf49Q9H6J7 331 aa11.83□□□□□ -0.52
MSI2-208ENST00000579466 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
MSI2-208ENST00000579466 GJD2Q9UKL4 321 aa11.83□□□□□ -0.52
MSI2-208ENST00000579466 RPTORQ8N122 1335 aa11.83□□□□□ -0.52
MSI2-208ENST00000579466 DLL1O00548 723 aa11.82□□□□□ -0.52
MSI2-208ENST00000579466 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
MSI2-208ENST00000579466 GNAI2P04899 355 aa11.82□□□□□ -0.52
MSI2-208ENST00000579466 ZYXQ15942 572 aaKnown RBP11.82□□□□□ -0.52
MSI2-208ENST00000579466 SH3D19Q5HYK7 790 aa11.82□□□□□ -0.52
MSI2-208ENST00000579466 Q7L0L9 218 aa11.82□□□□□ -0.52
MSI2-208ENST00000579466 CCAR1Q8IX12 1150 aaKnown RBP11.82□□□□□ -0.52
MSI2-208ENST00000579466 P2RX7Q99572 595 aaKnown RBP11.82□□□□□ -0.52
MSI2-208ENST00000579466 DBNDD2Q9BQY9 259 aa11.82□□□□□ -0.52
MSI2-208ENST00000579466 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
MSI2-208ENST00000579466 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
MSI2-208ENST00000579466 TXNRD2Q9NNW7 524 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms