RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 RNF41Q9H4P4 317 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 ARPP21Q9UBL0 812 aaPredicted RBP16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 DDX60LQ5H9U9 1706 aaKnown RBP16.5■□□□□ 0.23
CSNK1D-209ENST00000578904 COL2A1P02458 1487 aaPredicted RBP16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 TRAF5O00463 557 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 CYP21A2P08686 494 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 NT5C2P49902 561 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 NEK4P51957 841 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 ZFPM1Q8IX07 1006 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 CDCA5Q96FF9 252 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 IPO9Q96P70 1041 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 NEK1Q96PY6 1258 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 KIF2CQ99661 725 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 CNNM2Q9H8M5 875 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 PALD1Q9ULE6 856 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 LAMB1P07942 1786 aa16.49■□□□□ 0.23
CSNK1D-209ENST00000578904 CASTP20810 708 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 FSTL1Q12841 308 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 ANKRD1Q15327 319 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 PRAMEF18Q5VWM3 479 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 DLK2Q6UY11 383 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 RALYLQ86SE5 291 aaKnown RBP16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 RASEFQ8IZ41 740 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 NCOA7Q8NI08 942 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 ZNF287Q9HBT7 754 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 DCP1AQ9NPI6 582 aaPredicted RBP16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 MCM9Q9NXL9 1143 aa16.48■□□□□ 0.23
CSNK1D-209ENST00000578904 HLA-DOAP06340 250 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 NF2P35240 595 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 SLC4A8Q2Y0W8 1093 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 RUFY3Q7L099 469 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 CDAN1Q8IWY9 1227 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 KLRG1Q96E93 195 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 TEPSINQ96N21 525 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 CSRNP1Q96S65 589 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 KRT23Q9C075 422 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 ZNF408Q9H9D4 720 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 ZSWIM6Q9HCJ5 1215 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 ATRNL1Q5VV63 1379 aa16.47■□□□□ 0.23
CSNK1D-209ENST00000578904 DDTLA6NHG4 134 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 MINDY4BA8MYZ0 360 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 E7EWF7 191 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 ITGBL1O95965 494 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 POLR3DP05423 398 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 SUPT20HL1Q3ZLR7 823 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 NBPF12Q5TAG4 269 aaPredicted RBP16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 SH3BP5LQ7L8J4 393 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 TNS4Q8IZW8 715 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 JMYQ8N9B5 988 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 DHX36Q9H2U1 1008 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 MKRN1Q9UHC7 482 aaKnown RBP16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 ANAPC4Q9UJX5 808 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 SSC5DA1L4H1 1573 aa16.46■□□□□ 0.23
CSNK1D-209ENST00000578904 FOXP2O15409 715 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 HAND2P61296 217 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 FGD1P98174 961 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 FMR1Q06787 632 aaKnown RBP eCLIP16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 PDE4BQ07343 736 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 PPARAQ07869 468 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 AKNAD1Q5T1N1 836 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 TTC6Q86TZ1 520 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 HOOK2Q96ED9 719 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 PDRG1Q9NUG6 133 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 TAOK2Q9UL54 1235 aa16.45■□□□□ 0.22
CSNK1D-209ENST00000578904 USP17L12C9JPN9 530 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 USP17L21D6R901 530 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 CELF2O95319 508 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 MCM5P33992 734 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 DHX32Q7L7V1 743 aaKnown RBP16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 STAG1Q8WVM7 1258 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 TRIM34Q9BYJ4 488 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 PI4KBQ9UBF8 816 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 MYH8P13535 1937 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 WDR19Q8NEZ3 1342 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 PASKQ96RG2 1323 aa16.44■□□□□ 0.22
CSNK1D-209ENST00000578904 CYP2D6P10635 497 aa16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 RPS6KB1P23443 525 aa16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 HTRA3P83110 453 aa16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 ADCK5Q3MIX3 580 aa16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 DCAF15Q66K64 600 aa16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 CHMP4CQ96CF2 233 aa16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 UPF3BQ9BZI7 483 aaKnown RBP16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 ALDH8A1Q9H2A2 487 aaPredicted RBP16.43■□□□□ 0.22
CSNK1D-209ENST00000578904 TRPM7Q96QT4 1865 aa16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 CYP2D7A0A087X1C5 515 aa16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 K7ELQ4 463 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 HSP90AA1P07900 732 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 PRKG1Q13976 671 aa16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 TTLL12Q14166 644 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 SART3Q15020 963 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 ESR2Q92731 530 aa16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 ZSCAN31Q96LW9 406 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 MTA3Q9BTC8 594 aa16.42■□□□□ 0.22
CSNK1D-209ENST00000578904 TOMM22Q9NS69 142 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms