RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 DHX36Q9H2U1 1008 aaKnown RBP15.86■□□□□ 0.13
SRSF1-202ENST00000578430 TDRD3Q9H7E2 651 aaKnown RBP15.86■□□□□ 0.13
SRSF1-202ENST00000578430 HLA-DOAP06340 250 aa15.85■□□□□ 0.13
SRSF1-202ENST00000578430 DPY19L2Q6NUT2 758 aa15.85■□□□□ 0.13
SRSF1-202ENST00000578430 MICALL2Q8IY33 904 aa15.85■□□□□ 0.13
SRSF1-202ENST00000578430 ESR2Q92731 530 aa15.85■□□□□ 0.13
SRSF1-202ENST00000578430 DDX4Q9NQI0 724 aaKnown RBP15.85■□□□□ 0.13
SRSF1-202ENST00000578430 GPRC5DQ9NZD1 345 aa15.85■□□□□ 0.13
SRSF1-202ENST00000578430 ZNF70Q9UC06 446 aaPredicted RBP15.85■□□□□ 0.13
SRSF1-202ENST00000578430 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
SRSF1-202ENST00000578430 MYH1P12882 1939 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 PICALMQ13492 652 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 FAM83AQ86UY5 434 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 TMEM87BQ96K49 555 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 ZSCAN31Q96LW9 406 aaPredicted RBP15.84■□□□□ 0.13
SRSF1-202ENST00000578430 AGXT2Q9BYV1 514 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 EHD4Q9H223 541 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 NMRK2Q9NPI5 230 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 FAM198AQ9UFP1 575 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 SAP30BPQ9UHR5 308 aaKnown RBP15.84■□□□□ 0.13
SRSF1-202ENST00000578430 LIMCH1Q9UPQ0 1083 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 PCDHAC2Q9Y5I4 1007 aa15.84■□□□□ 0.13
SRSF1-202ENST00000578430 CYP2D7A0A087X1C5 515 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 WNT10BO00744 389 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 PRC1O43663 620 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 TOMM70O94826 608 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 CYP2D6P10635 497 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 CPA1P15085 419 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 APLP1P51693 650 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 AK2P54819 239 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 FGD1P98174 961 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 NFIAQ12857 509 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 SART3Q15020 963 aaKnown RBP15.83■□□□□ 0.12
SRSF1-202ENST00000578430 C16orf86Q6ZW13 317 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 FAM151AQ8WW52 585 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 SWAP70Q9UH65 585 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 NEDD4P46934 1319 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 ATRNL1Q5VV63 1379 aa15.83■□□□□ 0.12
SRSF1-202ENST00000578430 B4E1Z4 1266 aa15.82■□□□□ 0.12
SRSF1-202ENST00000578430 CD2BP2O95400 341 aaKnown RBP15.82■□□□□ 0.12
SRSF1-202ENST00000578430 LMOD1P29536 600 aaPredicted RBP15.82■□□□□ 0.12
SRSF1-202ENST00000578430 TNNI2P48788 182 aa15.82■□□□□ 0.12
SRSF1-202ENST00000578430 PLCD1P51178 756 aa15.82■□□□□ 0.12
SRSF1-202ENST00000578430 TNFAIP1Q13829 316 aa15.82■□□□□ 0.12
SRSF1-202ENST00000578430 KIF4BQ2VIQ3 1234 aa15.82■□□□□ 0.12
SRSF1-202ENST00000578430 SH2B1Q9NRF2 756 aaPredicted RBP15.82■□□□□ 0.12
SRSF1-202ENST00000578430 TOMM22Q9NS69 142 aa15.82■□□□□ 0.12
SRSF1-202ENST00000578430 PI4KBQ9UBF8 816 aa15.82■□□□□ 0.12
SRSF1-202ENST00000578430 KDM4AO75164 1064 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 CCDC178Q5BJE1 867 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 RRP12Q5JTH9 1297 aaKnown RBP15.81■□□□□ 0.12
SRSF1-202ENST00000578430 Q6ZUG5 572 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 FOXP4Q8IVH2 680 aaPredicted RBP15.81■□□□□ 0.12
SRSF1-202ENST00000578430 TMTC2Q8N394 836 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 CHMP4CQ96CF2 233 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 L3MBTL3Q96JM7 780 aaPredicted RBP15.81■□□□□ 0.12
SRSF1-202ENST00000578430 MKNK2Q9HBH9 465 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 ZSWIM5Q9P217 1185 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 SERPINB13Q9UIV8 391 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 TACC3Q9Y6A5 838 aa15.81■□□□□ 0.12
SRSF1-202ENST00000578430 WDR90Q96KV7 1748 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 ERICH2A1L162 156 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
SRSF1-202ENST00000578430 CDK8P49336 464 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 CACNB3P54284 484 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 EVCP57679 992 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 ANTXR2P58335 489 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 GABPAQ06546 454 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 TOB2Q14106 344 aaPredicted RBP15.8■□□□□ 0.12
SRSF1-202ENST00000578430 NBPF9Q3BBW0 867 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 CYB5R4Q7L1T6 521 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 METTL16Q86W50 562 aaKnown RBP15.8■□□□□ 0.12
SRSF1-202ENST00000578430 IQCA1Q86XH1 822 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 ZNF444Q8N0Y2 327 aaPredicted RBP15.8■□□□□ 0.12
SRSF1-202ENST00000578430 DNAJC5GQ8N7S2 189 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 TMX3Q96JJ7 454 aa15.8■□□□□ 0.12
SRSF1-202ENST00000578430 ADARB2Q9NS39 739 aaKnown RBP15.8■□□□□ 0.12
SRSF1-202ENST00000578430 ANGEL1Q9UNK9 670 aaKnown RBP15.8■□□□□ 0.12
SRSF1-202ENST00000578430 SHTN1A0MZ66 631 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 CLRN2A0PK11 232 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 GLTPD2A6NH11 291 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 RANBP6O60518 1105 aaKnown RBP15.79■□□□□ 0.12
SRSF1-202ENST00000578430 LIFRP42702 1097 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 TCP10Q12799 353 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 TBC1D10BQ4KMP7 808 aaPredicted RBP15.79■□□□□ 0.12
SRSF1-202ENST00000578430 SAMD7Q7Z3H4 446 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 ZSCAN29Q8IWY8 852 aaPredicted RBP15.79■□□□□ 0.12
SRSF1-202ENST00000578430 TCEANC2Q96MN5 208 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 UBAC1Q9BSL1 405 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 VEZTQ9HBM0 779 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 INCENPQ9NQS7 918 aa15.79■□□□□ 0.12
SRSF1-202ENST00000578430 TSPY2A6NKD2 308 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 TCP10L2B9ZVM9 353 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 SH2B2O14492 632 aaPredicted RBP15.78■□□□□ 0.12
SRSF1-202ENST00000578430 IFIT3O14879 490 aaKnown RBP15.78■□□□□ 0.12
SRSF1-202ENST00000578430 CUL4AQ13619 759 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 COL9A3Q14050 684 aaPredicted RBP15.78■□□□□ 0.12
SRSF1-202ENST00000578430 TMEM67Q5HYA8 995 aa15.78■□□□□ 0.12
SRSF1-202ENST00000578430 RBM26Q5T8P6 1007 aaKnown RBP15.78■□□□□ 0.12
SRSF1-202ENST00000578430 APOBEC3FQ8IUX4 373 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms