RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 NOC4LQ9BVI4 516 aaKnown RBP13.57□□□□□ -0.24
ERBB2-206ENST00000578373 GPCPD1Q9NPB8 672 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 TBC1D7Q9P0N9 293 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 TRPM1Q7Z4N2 1603 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 TRAF5O00463 557 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 PDE8AO60658 829 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 CDC25AP30304 524 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 KRT83P78385 493 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 MAP2K1Q02750 393 aaPredicted RBP13.57□□□□□ -0.24
ERBB2-206ENST00000578373 KRT79Q5XKE5 535 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 MICALL1Q8N3F8 863 aa13.57□□□□□ -0.24
ERBB2-206ENST00000578373 CKAP4Q07065 602 aaKnown RBP13.56□□□□□ -0.24
ERBB2-206ENST00000578373 ZNF654Q8IZM8 581 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 NEK11Q8NG66 645 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 LPIN2Q92539 896 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 RGS22Q8NE09 1264 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 VGLL3A8MV65 326 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 M0R2C6 588 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 OAS2P29728 719 aaKnown RBP13.56□□□□□ -0.24
ERBB2-206ENST00000578373 GNAQP50148 359 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 TDRD7Q8NHU6 1098 aaKnown RBP13.56□□□□□ -0.24
ERBB2-206ENST00000578373 MRFAP1L1Q96HT8 127 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 PUS7LQ9H0K6 701 aaKnown RBP13.56□□□□□ -0.24
ERBB2-206ENST00000578373 C6orf50Q9HD87 102 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 IMPACTQ9P2X3 320 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 RTL9Q8NET4 1388 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 IFNL3Q8IZI9 196 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 INCENPQ9NQS7 918 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 ASAP1Q9ULH1 1129 aa13.56□□□□□ -0.24
ERBB2-206ENST00000578373 MYO5CQ9NQX4 1742 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 TBCAO75347 108 aaKnown RBP13.55□□□□□ -0.24
ERBB2-206ENST00000578373 SEC31AO94979 1220 aaKnown RBP13.55□□□□□ -0.24
ERBB2-206ENST00000578373 LDHBP07195 334 aaKnown RBP13.55□□□□□ -0.24
ERBB2-206ENST00000578373 NR5A1Q13285 461 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 POLA2Q14181 598 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 PGBD1Q96JS3 809 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 NAPGQ99747 312 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-206ENST00000578373 GOLGA6L7A0A1B0GV03 622 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 KIF20AO95235 890 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 CUL5Q93034 780 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 TMEM110-MUSTN1A8MSY1 372 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 IGKV5-2P06315 115 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 CMA1P23946 247 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 RAPGEF1Q13905 1077 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 UBE4AQ14139 1066 aa13.55□□□□□ -0.24
ERBB2-206ENST00000578373 FAM207AQ9NSI2 230 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-206ENST00000578373 PRKAB2O43741 272 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 PAK1Q13153 545 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 DCAF17Q5H9S7 520 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-206ENST00000578373 ZMYM1Q5SVZ6 1142 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 HDXQ7Z353 690 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 SYNE4Q8N205 404 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 PPP2R2CQ9Y2T4 447 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 CCNT1O60563 726 aaKnown RBP13.54□□□□□ -0.24
ERBB2-206ENST00000578373 TUBB4AP04350 444 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 TOB2Q14106 344 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-206ENST00000578373 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 KCNQ4P56696 695 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 TPTE2Q6XPS3 522 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 RRP36Q96EU6 259 aaKnown RBP13.54□□□□□ -0.24
ERBB2-206ENST00000578373 NLRC4Q9NPP4 1024 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 RCOR1Q9UKL0 485 aa13.54□□□□□ -0.24
ERBB2-206ENST00000578373 GOLGA6L10A0A0M3HER8 536 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 ANKRD13CQ8N6S4 541 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 FANCBQ8NB91 859 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 PKD2L1Q9P0L9 805 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 USP6P35125 1406 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 CARMIL3Q8ND23 1372 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 HPDP32754 393 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-206ENST00000578373 TFAP4Q01664 338 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 RESTQ13127 1097 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 MAPKAPK5Q8IW41 473 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 NELFBQ8WX92 580 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 GOLGA8HP0CJ92 632 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 GJC1P36383 396 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
ERBB2-206ENST00000578373 APOA5Q6Q788 366 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 PAF1Q8N7H5 531 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 LINC00301Q8NCQ3 95 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 TNKSO95271 1327 aa13.53□□□□□ -0.24
ERBB2-206ENST00000578373 HLA-DOAP06340 250 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 HIBADHP31937 336 aaKnown RBP13.52□□□□□ -0.24
ERBB2-206ENST00000578373 SMC1AQ14683 1233 aaKnown RBP13.52□□□□□ -0.24
ERBB2-206ENST00000578373 NELFCDQ8IXH7 590 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 GPKOWQ92917 476 aaPredicted RBP eCLIP13.52□□□□□ -0.24
ERBB2-206ENST00000578373 CDC42BPAQ5VT25 1732 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 KRT13P13646 458 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 KIAA0753Q2KHM9 967 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 TICAM2Q86XR7 235 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 PDLIM2Q96JY6 352 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 TRIM31Q9BZY9 425 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 ZBTB21Q9ULJ3 1066 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 TAF6LQ9Y6J9 622 aa13.52□□□□□ -0.24
ERBB2-206ENST00000578373 SLF2Q8IX21 1173 aa13.52□□□□□ -0.25
ERBB2-206ENST00000578373 TEX11Q8IYF3 940 aa13.52□□□□□ -0.25
ERBB2-206ENST00000578373 GNPATO15228 680 aa13.52□□□□□ -0.25
ERBB2-206ENST00000578373 PPARAQ07869 468 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms