RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 AGTPBP1Q9UPW5 1226 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 FPGT-TNNI3KV9GXZ4 949 aa17.77■□□□□ 0.44
ITGB4-204ENST00000578318 CDK5RAP2Q96SN8 1893 aa17.76■□□□□ 0.43
ITGB4-204ENST00000578318 FAM196BA6NMK8 535 aa17.76■□□□□ 0.43
ITGB4-204ENST00000578318 BAG3O95817 575 aa17.76■□□□□ 0.43
ITGB4-204ENST00000578318 ATP8B2P98198 1209 aa17.76■□□□□ 0.43
ITGB4-204ENST00000578318 PROCA1Q8NCQ7 364 aaPredicted RBP17.76■□□□□ 0.43
ITGB4-204ENST00000578318 SHISA4Q96DD7 197 aa17.76■□□□□ 0.43
ITGB4-204ENST00000578318 PNMA3Q9UL41 463 aa17.76■□□□□ 0.43
ITGB4-204ENST00000578318 SIPA1L1O43166 1804 aa17.75■□□□□ 0.43
ITGB4-204ENST00000578318 FOCADQ5VW36 1801 aa17.75■□□□□ 0.43
ITGB4-204ENST00000578318 CCL5P13501 91 aa17.75■□□□□ 0.43
ITGB4-204ENST00000578318 PLCG2P16885 1265 aa17.75■□□□□ 0.43
ITGB4-204ENST00000578318 CAP2P40123 477 aa17.75■□□□□ 0.43
ITGB4-204ENST00000578318 NAA16Q6N069 864 aaPredicted RBP17.75■□□□□ 0.43
ITGB4-204ENST00000578318 FTSJ3Q8IY81 847 aaKnown RBP17.75■□□□□ 0.43
ITGB4-204ENST00000578318 SH3RF3Q8TEJ3 882 aaPredicted RBP17.75■□□□□ 0.43
ITGB4-204ENST00000578318 DBNDD2Q9BQY9 259 aa17.75■□□□□ 0.43
ITGB4-204ENST00000578318 SNRKQ9NRH2 765 aa17.75■□□□□ 0.43
ITGB4-204ENST00000578318 AATFQ9NY61 560 aaKnown RBP eCLIP17.75■□□□□ 0.43
ITGB4-204ENST00000578318 BIN2Q9UBW5 565 aaPredicted RBP17.75■□□□□ 0.43
ITGB4-204ENST00000578318 HERC5Q9UII4 1024 aaKnown RBP17.75■□□□□ 0.43
ITGB4-204ENST00000578318 MYO5AQ9Y4I1 1855 aaKnown RBP17.75■□□□□ 0.43
ITGB4-204ENST00000578318 TNPO2O14787 897 aaKnown RBP17.74■□□□□ 0.43
ITGB4-204ENST00000578318 IGSF3O75054 1194 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 SURF6O75683 361 aaKnown RBP17.74■□□□□ 0.43
ITGB4-204ENST00000578318 GJB1P08034 283 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 GJA8P48165 433 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 SPP2Q13103 211 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 TREML2Q5T2D2 321 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 DIEXFQ68CQ4 756 aaKnown RBP17.74■□□□□ 0.43
ITGB4-204ENST00000578318 ZNF280CQ8ND82 737 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 ZNF512BQ96KM6 892 aaPredicted RBP17.74■□□□□ 0.43
ITGB4-204ENST00000578318 RNF208Q9H0X6 261 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 DHX36Q9H2U1 1008 aaKnown RBP17.74■□□□□ 0.43
ITGB4-204ENST00000578318 C1orf115Q9H7X2 142 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 PI4KBQ9UBF8 816 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 GABRQQ9UN88 632 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 DOCK3Q8IZD9 2030 aa17.74■□□□□ 0.43
ITGB4-204ENST00000578318 USP17L5A8MUK1 530 aa17.73■□□□□ 0.43
ITGB4-204ENST00000578318 FLT3LGP49771 235 aa17.73■□□□□ 0.43
ITGB4-204ENST00000578318 PPP4CP60510 307 aa17.73■□□□□ 0.43
ITGB4-204ENST00000578318 HNRNPUQ00839 825 aaKnown RBP eCLIP17.73■□□□□ 0.43
ITGB4-204ENST00000578318 FAM110CQ1W6H9 321 aa17.73■□□□□ 0.43
ITGB4-204ENST00000578318 AS3MTQ9HBK9 375 aa17.73■□□□□ 0.43
ITGB4-204ENST00000578318 NOP58Q9Y2X3 529 aaKnown RBP17.73■□□□□ 0.43
ITGB4-204ENST00000578318 ADCY3O60266 1144 aa17.72■□□□□ 0.43
ITGB4-204ENST00000578318 CYP2E1P05181 493 aaPredicted RBP17.72■□□□□ 0.43
ITGB4-204ENST00000578318 PABPC4Q13310 644 aaKnown RBP eCLIP17.72■□□□□ 0.43
ITGB4-204ENST00000578318 IRF5Q13568 498 aa17.72■□□□□ 0.43
ITGB4-204ENST00000578318 RRP1BQ14684 758 aaKnown RBP17.72■□□□□ 0.43
ITGB4-204ENST00000578318 ITPRIPQ8IWB1 547 aa17.72■□□□□ 0.43
ITGB4-204ENST00000578318 ANKRD13CQ8N6S4 541 aa17.72■□□□□ 0.43
ITGB4-204ENST00000578318 PXYLP1Q8TE99 480 aa17.72■□□□□ 0.43
ITGB4-204ENST00000578318 CEP290O15078 2479 aa17.71■□□□□ 0.43
ITGB4-204ENST00000578318 GCLCP48506 637 aaPredicted RBP17.71■□□□□ 0.43
ITGB4-204ENST00000578318 HMGCS2P54868 508 aa17.71■□□□□ 0.43
ITGB4-204ENST00000578318 SH3D19Q5HYK7 790 aa17.71■□□□□ 0.43
ITGB4-204ENST00000578318 TGFBRAP1Q8WUH2 860 aa17.71■□□□□ 0.43
ITGB4-204ENST00000578318 COA7Q96BR5 231 aa17.71■□□□□ 0.43
ITGB4-204ENST00000578318 FLT1P17948 1338 aa17.71■□□□□ 0.42
ITGB4-204ENST00000578318 ZBTB7BO15156 539 aaPredicted RBP17.7■□□□□ 0.42
ITGB4-204ENST00000578318 ZAP70P43403 619 aa17.7■□□□□ 0.42
ITGB4-204ENST00000578318 ADGRA1Q86SQ6 560 aa17.7■□□□□ 0.42
ITGB4-204ENST00000578318 FOXP4Q8IVH2 680 aaPredicted RBP17.7■□□□□ 0.42
ITGB4-204ENST00000578318 MAPKAPK5Q8IW41 473 aa17.7■□□□□ 0.42
ITGB4-204ENST00000578318 U2AF1L4Q8WU68 220 aaKnown RBP17.7■□□□□ 0.42
ITGB4-204ENST00000578318 UNC93B1Q9H1C4 597 aa17.7■□□□□ 0.42
ITGB4-204ENST00000578318 DBNLQ9UJU6 430 aaKnown RBP17.7■□□□□ 0.42
ITGB4-204ENST00000578318 H0YGN5 161 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 INHAP05111 366 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 ASNSP08243 561 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 ELNP15502 786 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 UBE2Q1Q7Z7E8 422 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 MIER1Q8N108 512 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 HTATIP2Q9BUP3 242 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 WDR18Q9BV38 432 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 PIH1D3Q9NQM4 214 aaKnown RBP17.69■□□□□ 0.42
ITGB4-204ENST00000578318 GINM1Q9NU53 330 aa17.69■□□□□ 0.42
ITGB4-204ENST00000578318 MYH1P12882 1939 aa17.68■□□□□ 0.42
ITGB4-204ENST00000578318 SGPL1O95470 568 aa17.68■□□□□ 0.42
ITGB4-204ENST00000578318 RLBP1P12271 317 aa17.68■□□□□ 0.42
ITGB4-204ENST00000578318 CAPN2P17655 700 aa17.68■□□□□ 0.42
ITGB4-204ENST00000578318 METTL16Q86W50 562 aaKnown RBP17.68■□□□□ 0.42
ITGB4-204ENST00000578318 CRACR2BQ8N4Y2 399 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-204ENST00000578318 DPF3Q92784 378 aa17.68■□□□□ 0.42
ITGB4-204ENST00000578318 CCDC8Q9H0W5 538 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-204ENST00000578318 ASCC2Q9H1I8 757 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-204ENST00000578318 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
ITGB4-204ENST00000578318 TLR7Q9NYK1 1049 aaKnown RBP17.68■□□□□ 0.42
ITGB4-204ENST00000578318 COLQQ9Y215 455 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-204ENST00000578318 FARP2O94887 1054 aaPredicted RBP17.67■□□□□ 0.42
ITGB4-204ENST00000578318 HLA-DOAP06340 250 aa17.67■□□□□ 0.42
ITGB4-204ENST00000578318 CYP7A1P22680 504 aa17.67■□□□□ 0.42
ITGB4-204ENST00000578318 BACE1P56817 501 aa17.67■□□□□ 0.42
ITGB4-204ENST00000578318 MTMR2Q13614 643 aa17.67■□□□□ 0.42
ITGB4-204ENST00000578318 EAF2Q96CJ1 260 aaPredicted RBP17.67■□□□□ 0.42
ITGB4-204ENST00000578318 TMOD4Q9NZQ9 345 aa17.67■□□□□ 0.42
ITGB4-204ENST00000578318 TAOK2Q9UL54 1235 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms