RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 COL2A1P02458 1487 aaPredicted RBP15.48■□□□□ 0.07
CTC1-203ENST00000578240 CACNB3P54284 484 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 TRDNQ13061 729 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 CFAP100Q494V2 611 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 RRP12Q5JTH9 1297 aaKnown RBP15.48■□□□□ 0.07
CTC1-203ENST00000578240 C9orf131Q5VYM1 1079 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 CIAPIN1Q6FI81 312 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 SLC44A5Q8NCS7 719 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 GTF3C6Q969F1 213 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 ZSCAN31Q96LW9 406 aaPredicted RBP15.48■□□□□ 0.07
CTC1-203ENST00000578240 RNF41Q9H4P4 317 aaPredicted RBP15.48■□□□□ 0.07
CTC1-203ENST00000578240 LY9Q9HBG7 655 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 FAM198AQ9UFP1 575 aa15.48■□□□□ 0.07
CTC1-203ENST00000578240 BAZ2BQ9UIF8 2168 aaKnown RBP15.47■□□□□ 0.07
CTC1-203ENST00000578240 HSP90AA1P07900 732 aaKnown RBP15.47■□□□□ 0.07
CTC1-203ENST00000578240 PCP11498 1178 aaKnown RBP15.47■□□□□ 0.07
CTC1-203ENST00000578240 C1QTNF8P60827 252 aa15.47■□□□□ 0.07
CTC1-203ENST00000578240 PICALMQ13492 652 aa15.47■□□□□ 0.07
CTC1-203ENST00000578240 PKP1Q13835 747 aa15.47■□□□□ 0.07
CTC1-203ENST00000578240 AGBL3Q8NEM8 1001 aa15.47■□□□□ 0.07
CTC1-203ENST00000578240 JDP2Q8WYK2 163 aa15.47■□□□□ 0.07
CTC1-203ENST00000578240 ZBED3Q96IU2 234 aaPredicted RBP15.47■□□□□ 0.07
CTC1-203ENST00000578240 PRMT6Q96LA8 375 aaPredicted RBP15.47■□□□□ 0.07
CTC1-203ENST00000578240 OSBPL5Q9H0X9 879 aaPredicted RBP15.47■□□□□ 0.07
CTC1-203ENST00000578240 ANGEL1Q9UNK9 670 aaKnown RBP15.47■□□□□ 0.07
CTC1-203ENST00000578240 HPS5Q9UPZ3 1129 aa15.47■□□□□ 0.07
CTC1-203ENST00000578240 SPDYE2BA6NHP3 402 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 SPDYE6P0CI01 402 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 SCRN1Q12765 414 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 STK3Q13188 491 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 SEC23AQ15436 765 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 ZFPM1Q8IX07 1006 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 ZKSCAN3Q9BRR0 538 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 NID2Q14112 1375 aa15.46■□□□□ 0.07
CTC1-203ENST00000578240 PFKFB2O60825 505 aa15.45■□□□□ 0.06
CTC1-203ENST00000578240 PDIA3P30101 505 aaKnown RBP15.45■□□□□ 0.06
CTC1-203ENST00000578240 GABPAQ06546 454 aa15.45■□□□□ 0.06
CTC1-203ENST00000578240 C16orf86Q6ZW13 317 aa15.45■□□□□ 0.06
CTC1-203ENST00000578240 SGMS1Q86VZ5 419 aa15.45■□□□□ 0.06
CTC1-203ENST00000578240 TMEM87BQ96K49 555 aa15.45■□□□□ 0.06
CTC1-203ENST00000578240 TDRD3Q9H7E2 651 aaKnown RBP15.45■□□□□ 0.06
CTC1-203ENST00000578240 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
CTC1-203ENST00000578240 RNF181Q9P0P0 153 aa15.45■□□□□ 0.06
CTC1-203ENST00000578240 EGFRP00533 1210 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 RASA1P20936 1047 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 RBM5P52756 815 aaKnown RBP eCLIP15.44■□□□□ 0.06
CTC1-203ENST00000578240 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 ESR2Q92731 530 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 CIZ1Q9ULV3 898 aaPredicted RBP15.44■□□□□ 0.06
CTC1-203ENST00000578240 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 TNKSO95271 1327 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 KLF18A0A0U1RQI7 1052 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 NMT2O60551 498 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 CTDNEP1O95476 244 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 SLURP2P0DP57 97 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 FGD1P98174 961 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 APOA5Q6Q788 366 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 RAB11FIP4Q86YS3 637 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 ENAHQ8N8S7 591 aaPredicted RBP15.44■□□□□ 0.06
CTC1-203ENST00000578240 MTMR14Q8NCE2 650 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 ZNF274Q96GC6 653 aaPredicted RBP15.44■□□□□ 0.06
CTC1-203ENST00000578240 MTA3Q9BTC8 594 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 DNAJC18Q9H819 358 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 NCOA5Q9HCD5 579 aaKnown RBP15.44■□□□□ 0.06
CTC1-203ENST00000578240 CHMP5Q9NZZ3 219 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 CNTNAP1P78357 1384 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 PAPPA2Q9BXP8 1791 aa15.44■□□□□ 0.06
CTC1-203ENST00000578240 PLIN4Q96Q06 1357 aa15.43■□□□□ 0.06
CTC1-203ENST00000578240 RANBP6O60518 1105 aaKnown RBP15.43■□□□□ 0.06
CTC1-203ENST00000578240 NPM3O75607 178 aaKnown RBP15.43■□□□□ 0.06
CTC1-203ENST00000578240 POLR3DP05423 398 aaPredicted RBP15.43■□□□□ 0.06
CTC1-203ENST00000578240 LIFRP42702 1097 aa15.43■□□□□ 0.06
CTC1-203ENST00000578240 ZNF280AP59817 542 aaPredicted RBP15.43■□□□□ 0.06
CTC1-203ENST00000578240 TMEM67Q5HYA8 995 aa15.43■□□□□ 0.06
CTC1-203ENST00000578240 FAM47AQ5JRC9 791 aa15.43■□□□□ 0.06
CTC1-203ENST00000578240 ZDHHC9Q9Y397 364 aa15.43■□□□□ 0.06
CTC1-203ENST00000578240 DDTLA6NHG4 134 aaPredicted RBP15.42■□□□□ 0.06
CTC1-203ENST00000578240 GOLGA8BA8MQT2 603 aa15.42■□□□□ 0.06
CTC1-203ENST00000578240 IFIT3O14879 490 aaKnown RBP15.42■□□□□ 0.06
CTC1-203ENST00000578240 LMNB1P20700 586 aa15.42■□□□□ 0.06
CTC1-203ENST00000578240 CDK8P49336 464 aa15.42■□□□□ 0.06
CTC1-203ENST00000578240 GMPSP49915 693 aaPredicted RBP15.42■□□□□ 0.06
CTC1-203ENST00000578240 RAB3GAP1Q15042 981 aa15.42■□□□□ 0.06
CTC1-203ENST00000578240 SPDYE2Q495Y8 402 aa15.42■□□□□ 0.06
CTC1-203ENST00000578240 RCSD1Q6JBY9 416 aa15.42■□□□□ 0.06
CTC1-203ENST00000578240 CWC22Q9HCG8 908 aaKnown RBP15.42■□□□□ 0.06
CTC1-203ENST00000578240 OTOFQ9HC10 1997 aa15.42■□□□□ 0.06
CTC1-203ENST00000578240 JAK2O60674 1132 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 CCT2P78371 535 aaKnown RBP15.41■□□□□ 0.06
CTC1-203ENST00000578240 PDE4BQ07343 736 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 TNIP1Q15025 636 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 SMARCC2Q8TAQ2 1214 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 MYL10Q9BUA6 226 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 IL17RBQ9NRM6 502 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 DOCK1Q14185 1865 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 CLRN2A0PK11 232 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 SLC3A2P08195 630 aaKnown RBP15.41■□□□□ 0.06
CTC1-203ENST00000578240 RXRAP19793 462 aa15.41■□□□□ 0.06
CTC1-203ENST00000578240 RPS12P25398 132 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms