RNA–Protein interactions for RNA: ENST00000577498.1

IFT20-204, Transcript of intraflagellar transport 20, humanhuman

TSL 4

Gene IFT20, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-204ENST00000577498 SMIM22K7EJ46 135 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 RBM5P52756 815 aaKnown RBP eCLIP17.79■□□□□ 0.44
IFT20-204ENST00000577498 CFAP100Q494V2 611 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 TTC6Q86TZ1 520 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 NKX2-3Q8TAU0 364 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 IDI2Q9BXS1 227 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 LY9Q9HBG7 655 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 GPHNQ9NQX3 736 aaPredicted RBP17.79■□□□□ 0.44
IFT20-204ENST00000577498 SAP30BPQ9UHR5 308 aaKnown RBP17.79■□□□□ 0.44
IFT20-204ENST00000577498 ECM29Q5VYK3 1845 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 ADAMTSL1Q8N6G6 1762 aa17.79■□□□□ 0.44
IFT20-204ENST00000577498 DHX16O60231 1041 aaKnown RBP17.78■□□□□ 0.44
IFT20-204ENST00000577498 RANBP6O60518 1105 aaKnown RBP17.78■□□□□ 0.44
IFT20-204ENST00000577498 RPS12P25398 132 aaKnown RBP17.78■□□□□ 0.44
IFT20-204ENST00000577498 RCAN1P53805 252 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 SCRN1Q12765 414 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 STK3Q13188 491 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 CCDC178Q5BJE1 867 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 C16orf86Q6ZW13 317 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 IQCA1Q86XH1 822 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 OGFOD1Q8N543 542 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 MTMR14Q8NCE2 650 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 BRPF3Q9ULD4 1205 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 MYH1P12882 1939 aa17.78■□□□□ 0.44
IFT20-204ENST00000577498 RASSF7Q02833 373 aa17.77■□□□□ 0.44
IFT20-204ENST00000577498 WTAPQ15007 396 aa17.77■□□□□ 0.44
IFT20-204ENST00000577498 STK11IPQ8N1F8 1099 aa17.77■□□□□ 0.44
IFT20-204ENST00000577498 ZSCAN10Q96SZ4 725 aaPredicted RBP17.77■□□□□ 0.44
IFT20-204ENST00000577498 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.44
IFT20-204ENST00000577498 NID2Q14112 1375 aa17.77■□□□□ 0.43
IFT20-204ENST00000577498 SPDYE2BA6NHP3 402 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 CCDC69A6NI79 296 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 GOLGA8BA8MQT2 603 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 FZD9O00144 591 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 PRDM1O75626 825 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 SPDYE6P0CI01 402 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 GJB2P29033 226 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 PLCD1P51178 756 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 HMGN5P82970 282 aaKnown RBP17.76■□□□□ 0.43
IFT20-204ENST00000577498 EVX2Q03828 476 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 SEC23AQ15436 765 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 APOA5Q6Q788 366 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 SYNE3Q6ZMZ3 975 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 NFXL1Q6ZNB6 911 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
IFT20-204ENST00000577498 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 DDX4Q9NQI0 724 aaKnown RBP17.76■□□□□ 0.43
IFT20-204ENST00000577498 NAP1L2Q9ULW6 460 aaPredicted RBP17.76■□□□□ 0.43
IFT20-204ENST00000577498 HPS5Q9UPZ3 1129 aa17.76■□□□□ 0.43
IFT20-204ENST00000577498 COL2A1P02458 1487 aaPredicted RBP17.75■□□□□ 0.43
IFT20-204ENST00000577498 ZBTB43O43298 467 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 ENTPD3O75355 529 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 PDCP20941 246 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 EIF6P56537 245 aaKnown RBP17.75■□□□□ 0.43
IFT20-204ENST00000577498 PICALMQ13492 652 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 DLGAP5Q15398 846 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 SMARCC2Q8TAQ2 1214 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 DYNLL2Q96FJ2 89 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 SYT17Q9BSW7 474 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 EHD4Q9H223 541 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 TCP11L1Q9NUJ3 509 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 TMOD2Q9NZR1 351 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 SWAP70Q9UH65 585 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 KIF3AQ9Y496 699 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 SLC12A7Q9Y666 1083 aa17.75■□□□□ 0.43
IFT20-204ENST00000577498 TNKSO95271 1327 aa17.74■□□□□ 0.43
IFT20-204ENST00000577498 TSPY2A6NKD2 308 aa17.74■□□□□ 0.43
IFT20-204ENST00000577498 BRD1O95696 1058 aa17.74■□□□□ 0.43
IFT20-204ENST00000577498 HLA-DOAP06340 250 aa17.74■□□□□ 0.43
IFT20-204ENST00000577498 CDK8P49336 464 aa17.74■□□□□ 0.43
IFT20-204ENST00000577498 ZNF280AP59817 542 aaPredicted RBP17.74■□□□□ 0.43
IFT20-204ENST00000577498 CCT2P78371 535 aaKnown RBP17.74■□□□□ 0.43
IFT20-204ENST00000577498 ZNF444Q8N0Y2 327 aaPredicted RBP17.74■□□□□ 0.43
IFT20-204ENST00000577498 ENAHQ8N8S7 591 aaPredicted RBP17.74■□□□□ 0.43
IFT20-204ENST00000577498 NSUN7Q8NE18 718 aaKnown RBP17.74■□□□□ 0.43
IFT20-204ENST00000577498 PRMT6Q96LA8 375 aaPredicted RBP17.74■□□□□ 0.43
IFT20-204ENST00000577498 ZBTB12Q9Y330 459 aaPredicted RBP17.74■□□□□ 0.43
IFT20-204ENST00000577498 PCDHAC2Q9Y5I4 1007 aa17.74■□□□□ 0.43
IFT20-204ENST00000577498 WDR33Q9C0J8 1336 aaKnown RBP17.73■□□□□ 0.43
IFT20-204ENST00000577498 LMNB1P20700 586 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 RASA1P20936 1047 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.43
IFT20-204ENST00000577498 PRELPP51888 382 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 GABPAQ06546 454 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 NFIAQ12857 509 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 PPP2R5BQ15173 497 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 FKBP1CQ5VVH2 108 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 ARHGAP27Q6ZUM4 889 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 ANKS1AQ92625 1134 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 DPF2Q92785 391 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 TNPO1Q92973 898 aaKnown RBP17.73■□□□□ 0.43
IFT20-204ENST00000577498 ZBED3Q96IU2 234 aaPredicted RBP17.73■□□□□ 0.43
IFT20-204ENST00000577498 ZKSCAN3Q9BRR0 538 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 SENP2Q9HC62 589 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 FAM198AQ9UFP1 575 aa17.73■□□□□ 0.43
IFT20-204ENST00000577498 ATRNL1Q5VV63 1379 aa17.72■□□□□ 0.43
IFT20-204ENST00000577498 CDKL5O76039 1030 aa17.72■□□□□ 0.43
IFT20-204ENST00000577498 SYT1P21579 422 aa17.72■□□□□ 0.43
IFT20-204ENST00000577498 TFAP4Q01664 338 aa17.72■□□□□ 0.43
IFT20-204ENST00000577498 SLC4A8Q2Y0W8 1093 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms