RNA–Protein interactions for RNA: ENST00000577250.1

RIOK3-202, Transcript of RIO kinase 3, humanhuman

TSL 3

Gene RIOK3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-202ENST00000577250 ELNP15502 786 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 ARID4AP29374 1257 aaPredicted RBP11.77□□□□□ -0.53
RIOK3-202ENST00000577250 MCAMP43121 646 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 PABPC4Q13310 644 aaKnown RBP eCLIP11.77□□□□□ -0.53
RIOK3-202ENST00000577250 NAA16Q6N069 864 aaPredicted RBP11.77□□□□□ -0.53
RIOK3-202ENST00000577250 ZNF280CQ8ND82 737 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 ZNF384Q8TF68 577 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 U2AF1L4Q8WU68 220 aaKnown RBP11.77□□□□□ -0.53
RIOK3-202ENST00000577250 SHISA4Q96DD7 197 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 UNC93B1Q9H1C4 597 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 TNNQ9UQP3 1299 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 RFX7Q2KHR2 1363 aa11.77□□□□□ -0.53
RIOK3-202ENST00000577250 USP17L5A8MUK1 530 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 INHAP05111 366 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 PLCG2P16885 1265 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 CAP2P40123 477 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 HMGCS2P54868 508 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 TREML2Q5T2D2 321 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 CHRDL2Q6WN34 429 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 CRACR2BQ8N4Y2 399 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-202ENST00000577250 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-202ENST00000577250 SH3RF3Q8TEJ3 882 aaPredicted RBP11.76□□□□□ -0.53
RIOK3-202ENST00000577250 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 DHX36Q9H2U1 1008 aaKnown RBP11.76□□□□□ -0.53
RIOK3-202ENST00000577250 AS3MTQ9HBK9 375 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 AATFQ9NY61 560 aaKnown RBP eCLIP11.76□□□□□ -0.53
RIOK3-202ENST00000577250 PI4KBQ9UBF8 816 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 HERC5Q9UII4 1024 aaKnown RBP11.76□□□□□ -0.53
RIOK3-202ENST00000577250 NR2E3Q9Y5X4 410 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 RBBP6Q7Z6E9 1792 aaKnown RBP11.76□□□□□ -0.53
RIOK3-202ENST00000577250 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
RIOK3-202ENST00000577250 SURF6O75683 361 aaKnown RBP11.75□□□□□ -0.53
RIOK3-202ENST00000577250 FARP2O94887 1054 aaPredicted RBP11.75□□□□□ -0.53
RIOK3-202ENST00000577250 SGPL1O95470 568 aa11.75□□□□□ -0.53
RIOK3-202ENST00000577250 GCLCP48506 637 aaPredicted RBP11.75□□□□□ -0.53
RIOK3-202ENST00000577250 FXR1P51114 621 aaKnown RBP eCLIP11.75□□□□□ -0.53
RIOK3-202ENST00000577250 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
RIOK3-202ENST00000577250 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
RIOK3-202ENST00000577250 PXYLP1Q8TE99 480 aa11.75□□□□□ -0.53
RIOK3-202ENST00000577250 TGFBRAP1Q8WUH2 860 aa11.75□□□□□ -0.53
RIOK3-202ENST00000577250 DEFB118Q96PH6 123 aa11.75□□□□□ -0.53
RIOK3-202ENST00000577250 TMOD4Q9NZQ9 345 aa11.75□□□□□ -0.53
RIOK3-202ENST00000577250 IRX3P78415 501 aaPredicted RBP11.74□□□□□ -0.53
RIOK3-202ENST00000577250 IRF5Q13568 498 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 FAM110CQ1W6H9 321 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 TNNI3KQ59H18 835 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 MAPKAPK5Q8IW41 473 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 DBNDD2Q9BQY9 259 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 ASCC2Q9H1I8 757 aaPredicted RBP11.74□□□□□ -0.53
RIOK3-202ENST00000577250 GPR108Q9NPR9 543 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 FPGT-TNNI3KV9GXZ4 949 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 MYH2Q9UKX2 1941 aa11.74□□□□□ -0.53
RIOK3-202ENST00000577250 ASNSP08243 561 aa11.73□□□□□ -0.53
RIOK3-202ENST00000577250 BRCA2P51587 3418 aa11.73□□□□□ -0.53
RIOK3-202ENST00000577250 ATP8B2P98198 1209 aa11.73□□□□□ -0.53
RIOK3-202ENST00000577250 MTMR2Q13614 643 aa11.73□□□□□ -0.53
RIOK3-202ENST00000577250 ITPRIPQ8IWB1 547 aa11.73□□□□□ -0.53
RIOK3-202ENST00000577250 CCAR1Q8IX12 1150 aaKnown RBP11.73□□□□□ -0.53
RIOK3-202ENST00000577250 C1orf115Q9H7X2 142 aa11.73□□□□□ -0.53
RIOK3-202ENST00000577250 DOCK2Q92608 1830 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 COL2A1P02458 1487 aaPredicted RBP11.72□□□□□ -0.53
RIOK3-202ENST00000577250 EVI5O60447 810 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 CYP2E1P05181 493 aaPredicted RBP11.72□□□□□ -0.53
RIOK3-202ENST00000577250 HLA-DOAP06340 250 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 CAPN2P17655 700 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 ZAP70P43403 619 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 POLA2Q14181 598 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 RRP1BQ14684 758 aaKnown RBP11.72□□□□□ -0.53
RIOK3-202ENST00000577250 FOXP4Q8IVH2 680 aaPredicted RBP11.72□□□□□ -0.53
RIOK3-202ENST00000577250 SSH3Q8TE77 659 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 SAP30BPQ9UHR5 308 aaKnown RBP11.72□□□□□ -0.53
RIOK3-202ENST00000577250 PALD1Q9ULE6 856 aa11.72□□□□□ -0.53
RIOK3-202ENST00000577250 FLT1P17948 1338 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 IDH1O75874 414 aaKnown RBP11.71□□□□□ -0.53
RIOK3-202ENST00000577250 GDF11O95390 407 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 CYP7A1P22680 504 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 BACE1P56817 501 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 PPP4CP60510 307 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 HNRNPUQ00839 825 aaKnown RBP eCLIP11.71□□□□□ -0.53
RIOK3-202ENST00000577250 SH3D19Q5HYK7 790 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 UBE2Q1Q7Z7E8 422 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 WDR18Q9BV38 432 aa11.71□□□□□ -0.53
RIOK3-202ENST00000577250 CCDC8Q9H0W5 538 aaPredicted RBP11.71□□□□□ -0.53
RIOK3-202ENST00000577250 RBM27Q9P2N5 1060 aaKnown RBP11.71□□□□□ -0.53
RIOK3-202ENST00000577250 C19orf81C9J6K1 198 aa11.7□□□□□ -0.54
RIOK3-202ENST00000577250 HMGCRP04035 888 aa11.7□□□□□ -0.54
RIOK3-202ENST00000577250 USP5P45974 858 aa11.7□□□□□ -0.54
RIOK3-202ENST00000577250 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
RIOK3-202ENST00000577250 NECAB2Q7Z6G3 386 aa11.7□□□□□ -0.54
RIOK3-202ENST00000577250 ADGRA1Q86SQ6 560 aa11.7□□□□□ -0.54
RIOK3-202ENST00000577250 MIGA1Q8NAN2 632 aa11.7□□□□□ -0.54
RIOK3-202ENST00000577250 GPRC5AQ8NFJ5 357 aa11.7□□□□□ -0.54
RIOK3-202ENST00000577250 PAWRQ96IZ0 340 aaKnown RBP11.7□□□□□ -0.54
RIOK3-202ENST00000577250 P2RX7Q99572 595 aaKnown RBP11.7□□□□□ -0.54
RIOK3-202ENST00000577250 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.7□□□□□ -0.54
RIOK3-202ENST00000577250 CWC22Q9HCG8 908 aaKnown RBP11.7□□□□□ -0.54
RIOK3-202ENST00000577250 HMX1Q9NP08 348 aaPredicted RBP11.7□□□□□ -0.54
RIOK3-202ENST00000577250 PIH1D3Q9NQM4 214 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms