RNA–Protein interactions for RNA: ENST00000576202.1

TSR1-205, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-205ENST00000576202 TFCP2Q12800 502 aa16.15■□□□□ 0.18
TSR1-205ENST00000576202 TRMT2AQ8IZ69 625 aaKnown RBP16.15■□□□□ 0.18
TSR1-205ENST00000576202 ZNF384Q8TF68 577 aa16.15■□□□□ 0.18
TSR1-205ENST00000576202 CRISPLD2Q9H0B8 497 aa16.15■□□□□ 0.18
TSR1-205ENST00000576202 ATAD5Q96QE3 1844 aa16.15■□□□□ 0.18
TSR1-205ENST00000576202 SRGAP3O43295 1099 aa16.14■□□□□ 0.17
TSR1-205ENST00000576202 LDHCP07864 332 aa16.14■□□□□ 0.17
TSR1-205ENST00000576202 GSTO1P78417 241 aa16.14■□□□□ 0.17
TSR1-205ENST00000576202 SPP2Q13103 211 aa16.14■□□□□ 0.17
TSR1-205ENST00000576202 PABPC4Q13310 644 aaKnown RBP eCLIP16.14■□□□□ 0.17
TSR1-205ENST00000576202 ZNF280CQ8ND82 737 aa16.14■□□□□ 0.17
TSR1-205ENST00000576202 TBC1D2Q9BYX2 928 aa16.14■□□□□ 0.17
TSR1-205ENST00000576202 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.14■□□□□ 0.17
TSR1-205ENST00000576202 HMG20BQ9P0W2 317 aa16.14■□□□□ 0.17
TSR1-205ENST00000576202 GCLCP48506 637 aaPredicted RBP16.13■□□□□ 0.17
TSR1-205ENST00000576202 SPATA5Q8NB90 893 aa16.13■□□□□ 0.17
TSR1-205ENST00000576202 NSUN4Q96CB9 384 aaKnown RBP16.13■□□□□ 0.17
TSR1-205ENST00000576202 PAWRQ96IZ0 340 aaKnown RBP16.13■□□□□ 0.17
TSR1-205ENST00000576202 NEUROD6Q96NK8 337 aa16.13■□□□□ 0.17
TSR1-205ENST00000576202 ALPK3Q96L96 1907 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 HMGCRP04035 888 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 GNAI3P08754 354 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 CAP2P40123 477 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 HMGCS2P54868 508 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 MTX1Q13505 466 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 PI16Q6UXB8 463 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 NECAB2Q7Z6G3 386 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 ANKLE1Q8NAG6 615 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 RAI14Q9P0K7 980 aa16.12■□□□□ 0.17
TSR1-205ENST00000576202 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.12■□□□□ 0.17
TSR1-205ENST00000576202 DOCK3Q8IZD9 2030 aa16.11■□□□□ 0.17
TSR1-205ENST00000576202 USP17L5A8MUK1 530 aa16.11■□□□□ 0.17
TSR1-205ENST00000576202 GORABQ5T7V8 394 aa16.11■□□□□ 0.17
TSR1-205ENST00000576202 TBC1D9Q6ZT07 1266 aa16.11■□□□□ 0.17
TSR1-205ENST00000576202 DIS3LQ8TF46 1054 aaKnown RBP16.11■□□□□ 0.17
TSR1-205ENST00000576202 ASCC2Q9H1I8 757 aaPredicted RBP16.11■□□□□ 0.17
TSR1-205ENST00000576202 AS3MTQ9HBK9 375 aa16.11■□□□□ 0.17
TSR1-205ENST00000576202 STAP2Q9UGK3 403 aa16.11■□□□□ 0.17
TSR1-205ENST00000576202 HERC5Q9UII4 1024 aaKnown RBP16.11■□□□□ 0.17
TSR1-205ENST00000576202 LAMA3Q16787 3333 aa16.1■□□□□ 0.17
TSR1-205ENST00000576202 SOX1O00570 391 aaPredicted RBP16.1■□□□□ 0.17
TSR1-205ENST00000576202 ARID4AP29374 1257 aaPredicted RBP16.1■□□□□ 0.17
TSR1-205ENST00000576202 RRP1BQ14684 758 aaKnown RBP16.1■□□□□ 0.17
TSR1-205ENST00000576202 SH3D19Q5HYK7 790 aa16.1■□□□□ 0.17
TSR1-205ENST00000576202 TEX11Q8IYF3 940 aa16.1■□□□□ 0.17
TSR1-205ENST00000576202 GJD2Q9UKL4 321 aa16.1■□□□□ 0.17
TSR1-205ENST00000576202 RPTORQ8N122 1335 aa16.1■□□□□ 0.17
TSR1-205ENST00000576202 ARHGAP45Q92619 1136 aa16.09■□□□□ 0.17
TSR1-205ENST00000576202 HMX1Q9NP08 348 aaPredicted RBP16.09■□□□□ 0.17
TSR1-205ENST00000576202 MORF4L1Q9UBU8 362 aa16.09■□□□□ 0.17
TSR1-205ENST00000576202 PLXNB2O15031 1838 aa16.08■□□□□ 0.17
TSR1-205ENST00000576202 SIPA1L1O43166 1804 aa16.08■□□□□ 0.17
TSR1-205ENST00000576202 RARSP54136 660 aaKnown RBP16.08■□□□□ 0.16
TSR1-205ENST00000576202 TRIM32Q13049 653 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 C7orf61Q8IZ16 206 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 SH3RF3Q8TEJ3 882 aaPredicted RBP16.08■□□□□ 0.16
TSR1-205ENST00000576202 LRCH3Q96II8 777 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 NOL10Q9BSC4 688 aaKnown RBP16.08■□□□□ 0.16
TSR1-205ENST00000576202 WDR18Q9BV38 432 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 NBPF3Q9H094 633 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 PI4KBQ9UBF8 816 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 DDX60LQ5H9U9 1706 aaKnown RBP16.08■□□□□ 0.16
TSR1-205ENST00000576202 MAST2Q6P0Q8 1798 aa16.08■□□□□ 0.16
TSR1-205ENST00000576202 UQCRFS1P1P0C7P4 283 aa16.07■□□□□ 0.16
TSR1-205ENST00000576202 MCAMP43121 646 aa16.07■□□□□ 0.16
TSR1-205ENST00000576202 IRX3P78415 501 aaPredicted RBP16.07■□□□□ 0.16
TSR1-205ENST00000576202 MTMR2Q13614 643 aa16.07■□□□□ 0.16
TSR1-205ENST00000576202 SLC17A8Q8NDX2 589 aa16.07■□□□□ 0.16
TSR1-205ENST00000576202 TRIB2Q92519 343 aa16.07■□□□□ 0.16
TSR1-205ENST00000576202 GDF15Q99988 308 aa16.07■□□□□ 0.16
TSR1-205ENST00000576202 DHX36Q9H2U1 1008 aaKnown RBP16.07■□□□□ 0.16
TSR1-205ENST00000576202 COL6A3P12111 3177 aa16.06■□□□□ 0.16
TSR1-205ENST00000576202 ASNSP08243 561 aa16.06■□□□□ 0.16
TSR1-205ENST00000576202 BMP8BP34820 402 aa16.06■□□□□ 0.16
TSR1-205ENST00000576202 MNX1P50219 401 aaPredicted RBP16.06■□□□□ 0.16
TSR1-205ENST00000576202 BACE1P56817 501 aa16.06■□□□□ 0.16
TSR1-205ENST00000576202 C11orf49Q9H6J7 331 aa16.06■□□□□ 0.16
TSR1-205ENST00000576202 TMOD4Q9NZQ9 345 aa16.06■□□□□ 0.16
TSR1-205ENST00000576202 BAG3O95817 575 aa16.05■□□□□ 0.16
TSR1-205ENST00000576202 GNAI2P04899 355 aa16.05■□□□□ 0.16
TSR1-205ENST00000576202 CYP2B6P20813 491 aa16.05■□□□□ 0.16
TSR1-205ENST00000576202 HOXA7P31268 230 aaPredicted RBP16.05■□□□□ 0.16
TSR1-205ENST00000576202 G3BP1Q13283 466 aaKnown RBP eCLIP16.05■□□□□ 0.164e-6■■■■□ 21.1
TSR1-205ENST00000576202 MAP3K21Q5TCX8 1036 aa16.05■□□□□ 0.16
TSR1-205ENST00000576202 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
TSR1-205ENST00000576202 AATFQ9NY61 560 aaKnown RBP eCLIP16.05■□□□□ 0.16
TSR1-205ENST00000576202 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
TSR1-205ENST00000576202 ZMYND8Q9ULU4 1186 aaPredicted RBP16.05■□□□□ 0.16
TSR1-205ENST00000576202 CDK5RAP2Q96SN8 1893 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 FOCADQ5VW36 1801 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 PNMA6EA0A0J9YXQ4 647 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 C19orf81C9J6K1 198 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
TSR1-205ENST00000576202 PLCG2P16885 1265 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 HERVK_113P62684 666 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 JAG1P78504 1218 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 GPRC5AQ8NFJ5 357 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 SOCS4Q8WXH5 440 aa16.04■□□□□ 0.16
TSR1-205ENST00000576202 P2RX7Q99572 595 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms