RNA–Protein interactions for RNA: ENST00000576148.1

RAB40B-210, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40B, Length 343 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-210ENST00000576148 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.28□□□□□ -0.92
RAB40B-210ENST00000576148 ASCC2Q9H1I8 757 aaPredicted RBP9.28□□□□□ -0.92
RAB40B-210ENST00000576148 NKX2-4Q9H2Z4 354 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 TMEM39AQ9NV64 488 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 LRRFIP2Q9Y608 721 aaKnown RBP9.28□□□□□ -0.92
RAB40B-210ENST00000576148 UTYO14607 1347 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 MAPK8IP3Q9UPT6 1336 aa9.28□□□□□ -0.92
RAB40B-210ENST00000576148 ANKRD18BA2A2Z9 1011 aa9.27□□□□□ -0.93
RAB40B-210ENST00000576148 PLIN1O60240 522 aa9.27□□□□□ -0.93
RAB40B-210ENST00000576148 GJD3Q8N144 294 aa9.27□□□□□ -0.93
RAB40B-210ENST00000576148 TBC1D22AQ8WUA7 517 aa9.27□□□□□ -0.93
RAB40B-210ENST00000576148 FERMT2Q96AC1 680 aa9.27□□□□□ -0.93
RAB40B-210ENST00000576148 PLEKHF1Q96S99 279 aa9.27□□□□□ -0.93
RAB40B-210ENST00000576148 PNNQ9H307 717 aaKnown RBP9.27□□□□□ -0.93
RAB40B-210ENST00000576148 PHAXQ9H814 394 aaKnown RBP9.27□□□□□ -0.93
RAB40B-210ENST00000576148 CWC22Q9HCG8 908 aaKnown RBP9.27□□□□□ -0.93
RAB40B-210ENST00000576148 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 CFAP54Q96N23 3096 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 GFRA3O60609 400 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 CTNND1O60716 968 aaKnown RBP9.26□□□□□ -0.93
RAB40B-210ENST00000576148 KRT37O76014 449 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 DDX58O95786 925 aaKnown RBP9.26□□□□□ -0.93
RAB40B-210ENST00000576148 MORN1Q5T089 497 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 PLEKHH3Q7Z736 793 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 SLC44A5Q8NCS7 719 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 EDC3Q96F86 508 aaKnown RBP9.26□□□□□ -0.93
RAB40B-210ENST00000576148 MFSD14AQ96MC6 490 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 MAST3O60307 1309 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 SPEF2Q9C093 1822 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 WDFY4Q6ZS81 3184 aa9.26□□□□□ -0.93
RAB40B-210ENST00000576148 FRAT2O75474 233 aaPredicted RBP9.25□□□□□ -0.93
RAB40B-210ENST00000576148 SSTR3P32745 418 aaPredicted RBP9.25□□□□□ -0.93
RAB40B-210ENST00000576148 GYG1P46976 350 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 PTPN5P54829 565 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 RIPK4P57078 832 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 IRX3P78415 501 aaPredicted RBP9.25□□□□□ -0.93
RAB40B-210ENST00000576148 ATP2B2Q01814 1243 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 CHAF1AQ13111 956 aaPredicted RBP9.25□□□□□ -0.93
RAB40B-210ENST00000576148 MAP2K5Q13163 448 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 PPIGQ13427 754 aaKnown RBP eCLIP9.25□□□□□ -0.93
RAB40B-210ENST00000576148 TMEM240Q5SV17 173 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 RASIP1Q5U651 963 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 HHIPL2Q6UWX4 724 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 UBE3BQ7Z3V4 1068 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 GPR142Q7Z601 462 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 LAS1LQ9Y4W2 734 aaKnown RBP9.25□□□□□ -0.93
RAB40B-210ENST00000576148 MTCH2Q9Y6C9 303 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 CACNA1BQ00975 2339 aa9.25□□□□□ -0.93
RAB40B-210ENST00000576148 CHL1O00533 1208 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 PQBP1O60828 265 aaKnown RBP9.24□□□□□ -0.93
RAB40B-210ENST00000576148 GLRX3O76003 335 aaKnown RBP9.24□□□□□ -0.93
RAB40B-210ENST00000576148 CSF1RP07333 972 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 POU3F3P20264 500 aaPredicted RBP9.24□□□□□ -0.93
RAB40B-210ENST00000576148 LMOD3Q0VAK6 560 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 NEXNQ0ZGT2 675 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 SPP2Q13103 211 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 PPP2R2DQ66LE6 453 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 VPS37DQ86XT2 251 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 FAM84BQ96KN1 310 aaPredicted RBP9.24□□□□□ -0.93
RAB40B-210ENST00000576148 PLA2G12BQ9BX93 195 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 MTIF3Q9H2K0 278 aaKnown RBP9.24□□□□□ -0.93
RAB40B-210ENST00000576148 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.24□□□□□ -0.938e-8■■■■■ 28.7
RAB40B-210ENST00000576148 FLRT1Q9NZU1 646 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 SPTBN4Q9H254 2564 aa9.24□□□□□ -0.93
RAB40B-210ENST00000576148 DLG5Q8TDM6 1919 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 H7C1W4 665 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 DCXO43602 365 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 TIMP1P01033 207 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 IGKV5-2P06315 115 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 SLC5A1P13866 664 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 CYP2C19P33261 490 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 HMGCS2P54868 508 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 NFIAQ12857 509 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 DUSP27Q5VZP5 1158 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 MFSD5Q6N075 450 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 PSRC1Q6PGN9 363 aaPredicted RBP9.23□□□□□ -0.93
RAB40B-210ENST00000576148 C16orf59Q7L2K0 433 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 CCDC84Q86UT8 332 aaPredicted RBP9.23□□□□□ -0.93
RAB40B-210ENST00000576148 FAM178BQ8IXR5 827 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 PORCNQ9H237 461 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 TXNRD2Q9NNW7 524 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 TIMELESSQ9UNS1 1208 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 YBX2Q9Y2T7 364 aaKnown RBP9.23□□□□□ -0.93
RAB40B-210ENST00000576148 MAP3K2Q9Y2U5 619 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 SUGT1Q9Y2Z0 365 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 PLXNB2O15031 1838 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 USP34Q70CQ2 3546 aa9.23□□□□□ -0.93
RAB40B-210ENST00000576148 ZFHX2Q9C0A1 2572 aaPredicted RBP9.22□□□□□ -0.93
RAB40B-210ENST00000576148 LRRC37A2A6NM11 1700 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 PLXNA1Q9UIW2 1896 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 DCDC2CA8MYV0 355 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 PEX10O60683 326 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 ERVK-9P63128 1117 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 ERVK-24P63145 666 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 IFIT5Q13325 482 aaKnown RBP9.22□□□□□ -0.93
RAB40B-210ENST00000576148 UBE4AQ14139 1066 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 LRRC41Q15345 812 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 ANO1Q5XXA6 986 aa9.22□□□□□ -0.93
RAB40B-210ENST00000576148 CDC42EP5Q6NZY7 148 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms