RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TM4SF4P48230 202 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 SLC4A8Q2Y0W8 1093 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 SLFNL1Q499Z3 407 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 CERS3Q8IU89 383 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 PRDM10Q9NQV6 1147 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 SAGE1Q9NXZ1 904 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 SAP30BPQ9UHR5 308 aaKnown RBP16.04■□□□□ 0.16
RPAIN-216ENST00000575599 ZNF112Q9UJU3 913 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 LAMB1P07942 1786 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 MYH7P12883 1935 aa16.04■□□□□ 0.16
RPAIN-216ENST00000575599 TTC41PQ6P2S7 1318 aa16.03■□□□□ 0.16
RPAIN-216ENST00000575599 TCRBV5S4A2TA0A5A2 114 aa16.03■□□□□ 0.16
RPAIN-216ENST00000575599 MX1P20591 662 aa16.03■□□□□ 0.16
RPAIN-216ENST00000575599 ADD2P35612 726 aa16.03■□□□□ 0.16
RPAIN-216ENST00000575599 ERO1BQ86YB8 467 aa16.03■□□□□ 0.16
RPAIN-216ENST00000575599 RIOK1Q9BRS2 568 aaKnown RBP16.03■□□□□ 0.16
RPAIN-216ENST00000575599 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.03■□□□□ 0.162e-7■■□□□ 11.6
RPAIN-216ENST00000575599 SSUH2Q9Y2M2 353 aa16.03■□□□□ 0.16
RPAIN-216ENST00000575599 ERC2O15083 957 aa16.02■□□□□ 0.16
RPAIN-216ENST00000575599 IGHDP01880 384 aa16.02■□□□□ 0.16
RPAIN-216ENST00000575599 CHGBP05060 677 aa16.02■□□□□ 0.16
RPAIN-216ENST00000575599 B4GALNT3Q6L9W6 998 aa16.02■□□□□ 0.16
RPAIN-216ENST00000575599 DHX36Q9H2U1 1008 aaKnown RBP16.02■□□□□ 0.16
RPAIN-216ENST00000575599 PALD1Q9ULE6 856 aa16.02■□□□□ 0.16
RPAIN-216ENST00000575599 SIPA1L1O43166 1804 aa16.02■□□□□ 0.16
RPAIN-216ENST00000575599 DOCK1Q14185 1865 aa16.02■□□□□ 0.15
RPAIN-216ENST00000575599 PHF20L1A8MW92 1017 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 NOL9Q5SY16 702 aaKnown RBP16.01■□□□□ 0.15
RPAIN-216ENST00000575599 IFNL1Q8IU54 200 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 SCYL3Q8IZE3 742 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 LCORLQ8N3X6 602 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 PI4K2BQ8TCG2 481 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 TRIM34Q9BYJ4 488 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 LNPKQ9C0E8 428 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 PICK1Q9NRD5 415 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 PI4KBQ9UBF8 816 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 MYH1P12882 1939 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 NAV1Q8NEY1 1877 aa16.01■□□□□ 0.15
RPAIN-216ENST00000575599 CCL15-CCL14A0A0B4J2E2 113 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 IGF2BP3O00425 579 aaKnown RBP eCLIP16■□□□□ 0.15
RPAIN-216ENST00000575599 IRF6O14896 467 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 TBC1D12O60347 775 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 GLRX3O76003 335 aaKnown RBP16■□□□□ 0.15
RPAIN-216ENST00000575599 TBC1D8O95759 1140 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 HLA-DOAP06340 250 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 GTF2A2P52657 109 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 INHBEP58166 350 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 MAP3K10Q02779 954 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 PPIL2Q13356 520 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 CCL15Q16663 113 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 ZSCAN25Q6NSZ9 544 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 SMC5Q8IY18 1101 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 CRNKL1Q9BZJ0 848 aaKnown RBP16■□□□□ 0.15
RPAIN-216ENST00000575599 ARMT1Q9H993 441 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 MBD4O95243 580 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 PPATQ06203 517 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 UBE3CQ15386 1083 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 CRACR2BQ8N4Y2 399 aaPredicted RBP16■□□□□ 0.15
RPAIN-216ENST00000575599 KBTBD3Q8NAB2 608 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 BRI3BPQ8WY22 251 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 MS4A4AQ96JQ5 239 aa16■□□□□ 0.15
RPAIN-216ENST00000575599 FRMD4AQ9P2Q2 1039 aaPredicted RBP16■□□□□ 0.15
RPAIN-216ENST00000575599 HERC5Q9UII4 1024 aaKnown RBP16■□□□□ 0.15
RPAIN-216ENST00000575599 DDX60LQ5H9U9 1706 aaKnown RBP15.99■□□□□ 0.15
RPAIN-216ENST00000575599 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 CASP8AP2Q9UKL3 1982 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
RPAIN-216ENST00000575599 ALDH1A1P00352 501 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 SNAPC2Q13487 334 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 OTUD7BQ6GQQ9 843 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 TNS4Q8IZW8 715 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 SDR42E1Q8WUS8 393 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 CCDC136Q96JN2 1154 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 PTPN18Q99952 460 aa15.99■□□□□ 0.15
RPAIN-216ENST00000575599 ATAD5Q96QE3 1844 aa15.98■□□□□ 0.15
RPAIN-216ENST00000575599 TESPA1A2RU30 521 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-216ENST00000575599 CETPP11597 493 aa15.98■□□□□ 0.15
RPAIN-216ENST00000575599 PTPRAP18433 802 aa15.98■□□□□ 0.15
RPAIN-216ENST00000575599 CCDC84Q86UT8 332 aaPredicted RBP15.98■□□□□ 0.15
RPAIN-216ENST00000575599 DNAJC18Q9H819 358 aa15.98■□□□□ 0.15
RPAIN-216ENST00000575599 ZHX2Q9Y6X8 837 aa15.98■□□□□ 0.15
RPAIN-216ENST00000575599 PRKAB2O43741 272 aa15.97■□□□□ 0.15
RPAIN-216ENST00000575599 POLR3DP05423 398 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-216ENST00000575599 PDE1AP54750 535 aa15.97■□□□□ 0.15
RPAIN-216ENST00000575599 CHD1LQ86WJ1 897 aa15.97■□□□□ 0.15
RPAIN-216ENST00000575599 FOXP4Q8IVH2 680 aaPredicted RBP15.97■□□□□ 0.15
RPAIN-216ENST00000575599 FSD1Q9BTV5 496 aa15.97■□□□□ 0.15
RPAIN-216ENST00000575599 PUS7LQ9H0K6 701 aaKnown RBP15.97■□□□□ 0.15
RPAIN-216ENST00000575599 R3HDMLQ9H3Y0 253 aa15.97■□□□□ 0.15
RPAIN-216ENST00000575599 MCM9Q9NXL9 1143 aa15.97■□□□□ 0.15
RPAIN-216ENST00000575599 RNF113AO15541 343 aaKnown RBP15.96■□□□□ 0.15
RPAIN-216ENST00000575599 NUCB1Q02818 461 aa15.96■□□□□ 0.15
RPAIN-216ENST00000575599 RRP1BQ14684 758 aaKnown RBP15.96■□□□□ 0.15
RPAIN-216ENST00000575599 TTC6Q86TZ1 520 aa15.96■□□□□ 0.15
RPAIN-216ENST00000575599 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
RPAIN-216ENST00000575599 DCP1AQ9NPI6 582 aaPredicted RBP15.96■□□□□ 0.15
RPAIN-216ENST00000575599 KCNH4Q9UQ05 1017 aa15.96■□□□□ 0.15
RPAIN-216ENST00000575599 ZFYP08048 801 aaPredicted RBP15.95■□□□□ 0.14
RPAIN-216ENST00000575599 CAP2P40123 477 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms