RNA–Protein interactions for RNA: ENST00000575461.1

CALCOCO2-226, Transcript of calcium binding and coiled-coil domain 2, humanhuman

Gene CALCOCO2, Length 465 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-226ENST00000575461 SPATA9Q9BWV2 254 aa11.36□□□□□ -0.59
CALCOCO2-226ENST00000575461 IRF2BPLQ9H1B7 796 aa11.36□□□□□ -0.59
CALCOCO2-226ENST00000575461 CCDC86Q9H6F5 360 aaKnown RBP11.36□□□□□ -0.59
CALCOCO2-226ENST00000575461 CNNM2Q9H8M5 875 aa11.36□□□□□ -0.59
CALCOCO2-226ENST00000575461 CORINQ9Y5Q5 1042 aa11.36□□□□□ -0.59
CALCOCO2-226ENST00000575461 CCDC163A0A0D9SF12 145 aa11.35□□□□□ -0.59
CALCOCO2-226ENST00000575461 ALAS2P22557 587 aa11.35□□□□□ -0.59
CALCOCO2-226ENST00000575461 MAP2K3P46734 347 aa11.35□□□□□ -0.59
CALCOCO2-226ENST00000575461 LAPTM4AQ15012 233 aa11.35□□□□□ -0.59
CALCOCO2-226ENST00000575461 NRSN2Q9GZP1 204 aa11.35□□□□□ -0.59
CALCOCO2-226ENST00000575461 ADAM30Q9UKF2 790 aa11.35□□□□□ -0.59
CALCOCO2-226ENST00000575461 ACRP10323 421 aa11.34□□□□□ -0.59
CALCOCO2-226ENST00000575461 HCLS1P14317 486 aaPredicted RBP11.34□□□□□ -0.59
CALCOCO2-226ENST00000575461 HP1BP3Q5SSJ5 553 aaPredicted RBP11.34□□□□□ -0.59
CALCOCO2-226ENST00000575461 CYFIP1Q7L576 1253 aa11.34□□□□□ -0.59
CALCOCO2-226ENST00000575461 CD2APQ9Y5K6 639 aa11.34□□□□□ -0.59
CALCOCO2-226ENST00000575461 LTBP3Q9NS15 1303 aa11.34□□□□□ -0.59
CALCOCO2-226ENST00000575461 MAOBP27338 520 aa11.33□□□□□ -0.6
CALCOCO2-226ENST00000575461 FCHSD1Q86WN1 690 aa11.33□□□□□ -0.6
CALCOCO2-226ENST00000575461 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
CALCOCO2-226ENST00000575461 SUSD5O60279 629 aa11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 FAM153BP0C7A2 387 aa11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 CDC25BP30305 580 aa11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 SLC7A5Q01650 507 aa11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 ZYXQ15942 572 aaKnown RBP11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 SGSM3Q96HU1 749 aa11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 SLC9A7Q96T83 725 aa11.32□□□□□ -0.6
CALCOCO2-226ENST00000575461 NEURL1BA8MQ27 555 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 S100BP04271 92 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 GRIK5Q16478 980 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 SLC10A6Q3KNW5 377 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 KIAA1211LQ6NV74 962 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 NUDT8Q8WV74 236 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 STAG1Q8WVM7 1258 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 MFSD3Q96ES6 412 aa11.31□□□□□ -0.6
CALCOCO2-226ENST00000575461 LINC01387J3KSC0 135 aa11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 FSCN2O14926 492 aa11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 ZNF862O60290 1169 aa11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 PARNO95453 639 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 ECEL1O95672 775 aa11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 PDGFRBP09619 1106 aa11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 BAG6P46379 1132 aa11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 NINJ1Q92982 152 aa11.3□□□□□ -0.6
CALCOCO2-226ENST00000575461 AGRPO00253 132 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 ADCY3O60266 1144 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 PGRP06401 933 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 NAT2P11245 290 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 CCNFP41002 786 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 ZNF143P52747 638 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 BBS9Q3SYG4 887 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 TM4SF20Q53R12 229 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 JPH1Q9HDC5 661 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 KLHL3Q9UH77 587 aa11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 ZNF214Q9UL59 606 aaPredicted RBP11.29□□□□□ -0.6
CALCOCO2-226ENST00000575461 DNAJA2O60884 412 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 RFPL3O75679 317 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 SLFN14P0C7P3 912 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 RAG1P15918 1043 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 GRK4P32298 578 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 GNPTABQ3T906 1256 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 TXNDC11Q6PKC3 985 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 KLHL23Q8NBE8 558 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 KLHL6Q8WZ60 621 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 PCDHB10Q9UN67 800 aa11.28□□□□□ -0.6
CALCOCO2-226ENST00000575461 PRAMEF27A3QJZ7 478 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 DCDC2CA8MYV0 355 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 LIG1P18858 919 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 HSP90AB2PQ58FF8 381 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 ZC3H12AQ5D1E8 599 aaKnown RBP11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 CHAC2Q8WUX2 184 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 DHRS1Q96LJ7 313 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 WNT10AQ9GZT5 417 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 MBIPQ9NS73 344 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 GGA1Q9UJY5 639 aa11.27□□□□□ -0.61
CALCOCO2-226ENST00000575461 CNGA1P29973 690 aa11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 YARSP54577 528 aaKnown RBP11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 SUZ12Q15022 739 aaKnown RBP11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 C20orf204Q6ZNR8 217 aa11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 HOMER2Q9NSB8 354 aa11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 CHPF2Q9P2E5 772 aa11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 GMPR2Q9P2T1 348 aaKnown RBP11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 STARD13Q9Y3M8 1113 aa11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 SYNGAP1Q96PV0 1343 aa11.26□□□□□ -0.61
CALCOCO2-226ENST00000575461 CHURC1-FNTBB4DL54 471 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 AFF1P51825 1210 aaKnown RBP11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 GAS6Q14393 721 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 FERMT3Q86UX7 667 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 C12orf40Q86WS4 652 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 WFDC8Q8IUA0 241 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 MAP4K3Q8IVH8 894 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 CEP89Q96ST8 783 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 POLR3GLQ9BT43 218 aa11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 GDF2Q9UK05 429 aaPredicted RBP11.25□□□□□ -0.61
CALCOCO2-226ENST00000575461 CTSBP07858 339 aa11.24□□□□□ -0.61
CALCOCO2-226ENST00000575461 ETF1P62495 437 aaKnown RBP11.24□□□□□ -0.61
CALCOCO2-226ENST00000575461 RING1Q06587 406 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms