RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 PHKA1P46020 1223 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 SOCS4Q8WXH5 440 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 UBE2OQ9C0C9 1292 aaKnown RBP11.16□□□□□ -0.62
SMG6-218ENST00000575454 SIL1Q9H173 461 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 OTOFQ9HC10 1997 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
SMG6-218ENST00000575454 ARAP2Q8WZ64 1704 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 MROH7-TTC4A0A0A0MT08 1334 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 MVPQ14764 893 aaKnown RBP11.15□□□□□ -0.62
SMG6-218ENST00000575454 SH3D19Q5HYK7 790 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 ERICH6Q7L0X2 663 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 ASCC2Q9H1I8 757 aaPredicted RBP11.15□□□□□ -0.62
SMG6-218ENST00000575454 DDX4Q9NQI0 724 aaKnown RBP11.15□□□□□ -0.62
SMG6-218ENST00000575454 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 MORF4L1Q9UBU8 362 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
SMG6-218ENST00000575454 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.63
SMG6-218ENST00000575454 E9PSI1 815 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 MAPK4P31152 587 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 CAP2P40123 477 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 HMGCS2P54868 508 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 IRX3P78415 501 aaPredicted RBP11.14□□□□□ -0.63
SMG6-218ENST00000575454 RASGRF1Q13972 1273 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 PDE3AQ14432 1141 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 MAP3K21Q5TCX8 1036 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
SMG6-218ENST00000575454 GPRC5AQ8NFJ5 357 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 GTF3C2Q8WUA4 911 aaPredicted RBP11.14□□□□□ -0.63
SMG6-218ENST00000575454 SSH1Q8WYL5 1049 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 NUDT12Q9BQG2 462 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 WDR18Q9BV38 432 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 COPRSQ9NQ92 184 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 TMOD4Q9NZQ9 345 aa11.14□□□□□ -0.63
SMG6-218ENST00000575454 HERC5Q9UII4 1024 aaKnown RBP11.14□□□□□ -0.63
SMG6-218ENST00000575454 PRKAR2AP13861 404 aaKnown RBP11.13□□□□□ -0.63
SMG6-218ENST00000575454 SYN1P17600 705 aa11.13□□□□□ -0.63
SMG6-218ENST00000575454 CYP2B6P20813 491 aa11.13□□□□□ -0.63
SMG6-218ENST00000575454 HOXA7P31268 230 aaPredicted RBP11.13□□□□□ -0.63
SMG6-218ENST00000575454 RHBDL3P58872 404 aa11.13□□□□□ -0.63
SMG6-218ENST00000575454 MECOMQ03112 1051 aa11.13□□□□□ -0.63
SMG6-218ENST00000575454 FAM109BQ6ICB4 259 aaPredicted RBP11.13□□□□□ -0.63
SMG6-218ENST00000575454 Q7L0L9 218 aa11.13□□□□□ -0.63
SMG6-218ENST00000575454 DHX36Q9H2U1 1008 aaKnown RBP11.13□□□□□ -0.63
SMG6-218ENST00000575454 GINM1Q9NU53 330 aa11.13□□□□□ -0.63
SMG6-218ENST00000575454 C19orf81C9J6K1 198 aa11.12□□□□□ -0.63
SMG6-218ENST00000575454 ASNSP08243 561 aa11.12□□□□□ -0.63
SMG6-218ENST00000575454 ZKSCAN1P17029 563 aaPredicted RBP11.12□□□□□ -0.63
SMG6-218ENST00000575454 ADORA1P30542 326 aa11.12□□□□□ -0.63
SMG6-218ENST00000575454 BACE1P56817 501 aa11.12□□□□□ -0.63
SMG6-218ENST00000575454 TRIM32Q13049 653 aa11.12□□□□□ -0.63
SMG6-218ENST00000575454 CCDC84Q86UT8 332 aaPredicted RBP11.12□□□□□ -0.63
SMG6-218ENST00000575454 TRIB2Q92519 343 aa11.12□□□□□ -0.63
SMG6-218ENST00000575454 NOL10Q9BSC4 688 aaKnown RBP11.12□□□□□ -0.63
SMG6-218ENST00000575454 PI4KBQ9UBF8 816 aa11.12□□□□□ -0.63
SMG6-218ENST00000575454 ZNF521Q96K83 1311 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 GLRX3O76003 335 aaKnown RBP11.11□□□□□ -0.63
SMG6-218ENST00000575454 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 COL6A1P12109 1028 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 PLCG2P16885 1265 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 RGS2P41220 211 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 TIMM10P62072 90 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 GORABQ5T7V8 394 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 FAM9BQ8IZU0 186 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 XAGE2Q96GT9 111 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 P2RX7Q99572 595 aaKnown RBP11.11□□□□□ -0.63
SMG6-218ENST00000575454 LBHD1Q9BQE6 289 aaPredicted RBP11.11□□□□□ -0.63
SMG6-218ENST00000575454 TRIM34Q9BYJ4 488 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 RAI14Q9P0K7 980 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.11□□□□□ -0.63
SMG6-218ENST00000575454 ZSWIM8A7E2V4 1837 aa11.11□□□□□ -0.63
SMG6-218ENST00000575454 A0A1B0GUL7 405 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 BAG3O95817 575 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 HERVK_113P62684 666 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 MTMR2Q13614 643 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 FOXP4Q8IVH2 680 aaPredicted RBP11.1□□□□□ -0.63
SMG6-218ENST00000575454 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.1□□□□□ -0.63
SMG6-218ENST00000575454 TEX11Q8IYF3 940 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 SPATA5Q8NB90 893 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 NSUN4Q96CB9 384 aaKnown RBP11.1□□□□□ -0.63
SMG6-218ENST00000575454 API5Q9BZZ5 524 aaKnown RBP11.1□□□□□ -0.63
SMG6-218ENST00000575454 CWC22Q9HCG8 908 aaKnown RBP11.1□□□□□ -0.63
SMG6-218ENST00000575454 SMC4Q9NTJ3 1288 aa11.1□□□□□ -0.63
SMG6-218ENST00000575454 PA2G4Q9UQ80 394 aaKnown RBP11.1□□□□□ -0.63
SMG6-218ENST00000575454 COL2A1P02458 1487 aaPredicted RBP11.1□□□□□ -0.63
SMG6-218ENST00000575454 PFASO15067 1338 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 USP17L10C9JJH3 530 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 POTEB2H3BUK9 544 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 MSCO60682 206 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 IGSF3O75054 1194 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 CCNA1P78396 465 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 CACNB2Q08289 660 aaPredicted RBP11.09□□□□□ -0.63
SMG6-218ENST00000575454 MFSD14CQ5VZR4 134 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 LHX8Q68G74 356 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 ATF7IPQ6VMQ6 1270 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 PLEKHH3Q7Z736 793 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 USP6NLQ92738 828 aa11.09□□□□□ -0.63
SMG6-218ENST00000575454 NEUROD6Q96NK8 337 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms