RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 MAP4K4O95819 1239 aaPredicted RBP20.63■□□□□ 0.89
TVP23A-209ENST00000575135 ELNP15502 786 aa20.63■□□□□ 0.89
TVP23A-209ENST00000575135 MCAMP43121 646 aa20.63■□□□□ 0.89
TVP23A-209ENST00000575135 ATF7IPQ6VMQ6 1270 aa20.63■□□□□ 0.89
TVP23A-209ENST00000575135 OSBPL5Q9H0X9 879 aaPredicted RBP20.63■□□□□ 0.89
TVP23A-209ENST00000575135 DOCK3Q8IZD9 2030 aa20.63■□□□□ 0.89
TVP23A-209ENST00000575135 SPP2Q13103 211 aa20.62■□□□□ 0.89
TVP23A-209ENST00000575135 ANKRD13CQ8N6S4 541 aa20.62■□□□□ 0.89
TVP23A-209ENST00000575135 U2AF1L4Q8WU68 220 aaKnown RBP20.62■□□□□ 0.89
TVP23A-209ENST00000575135 CLUAP1Q96AJ1 413 aa20.62■□□□□ 0.89
TVP23A-209ENST00000575135 RRP1BQ14684 758 aaKnown RBP20.61■□□□□ 0.89
TVP23A-209ENST00000575135 CHRDL2Q6WN34 429 aa20.61■□□□□ 0.89
TVP23A-209ENST00000575135 TEX11Q8IYF3 940 aa20.61■□□□□ 0.89
TVP23A-209ENST00000575135 ZNF280CQ8ND82 737 aa20.61■□□□□ 0.89
TVP23A-209ENST00000575135 LRP2BPQ9P2M1 347 aa20.61■□□□□ 0.89
TVP23A-209ENST00000575135 SGPL1O95470 568 aa20.6■□□□□ 0.89
TVP23A-209ENST00000575135 INHAP05111 366 aa20.6■□□□□ 0.89
TVP23A-209ENST00000575135 UQCRFS1P1P0C7P4 283 aa20.6■□□□□ 0.89
TVP23A-209ENST00000575135 IRF5Q13568 498 aa20.6■□□□□ 0.89
TVP23A-209ENST00000575135 PROCA1Q8NCQ7 364 aaPredicted RBP20.6■□□□□ 0.89
TVP23A-209ENST00000575135 PXYLP1Q8TE99 480 aa20.6■□□□□ 0.89
TVP23A-209ENST00000575135 SH3RF3Q8TEJ3 882 aaPredicted RBP20.6■□□□□ 0.89
TVP23A-209ENST00000575135 PNMA3Q9UL41 463 aa20.6■□□□□ 0.89
TVP23A-209ENST00000575135 COL2A1P02458 1487 aaPredicted RBP20.6■□□□□ 0.89
TVP23A-209ENST00000575135 ATAD5Q96QE3 1844 aa20.6■□□□□ 0.89
TVP23A-209ENST00000575135 CAP2P40123 477 aa20.59■□□□□ 0.89
TVP23A-209ENST00000575135 HMGCS2P54868 508 aa20.59■□□□□ 0.89
TVP23A-209ENST00000575135 COA7Q96BR5 231 aa20.59■□□□□ 0.89
TVP23A-209ENST00000575135 HTATIP2Q9BUP3 242 aa20.59■□□□□ 0.89
TVP23A-209ENST00000575135 SNRKQ9NRH2 765 aa20.59■□□□□ 0.89
TVP23A-209ENST00000575135 TAOK2Q9UL54 1235 aa20.59■□□□□ 0.89
TVP23A-209ENST00000575135 FARP2O94887 1054 aaPredicted RBP20.58■□□□□ 0.89
TVP23A-209ENST00000575135 FAM110CQ1W6H9 321 aa20.58■□□□□ 0.89
TVP23A-209ENST00000575135 NOL10Q9BSC4 688 aaKnown RBP20.58■□□□□ 0.89
TVP23A-209ENST00000575135 LOC285556D6RIA3 1793 aa20.57■□□□□ 0.88
TVP23A-209ENST00000575135 USP17L5A8MUK1 530 aa20.57■□□□□ 0.88
TVP23A-209ENST00000575135 TFRCP02786 760 aaKnown RBP20.57■□□□□ 0.88
TVP23A-209ENST00000575135 NAA16Q6N069 864 aaPredicted RBP20.57■□□□□ 0.88
TVP23A-209ENST00000575135 TMEM57Q8N5G2 664 aa20.57■□□□□ 0.88
TVP23A-209ENST00000575135 DEFB118Q96PH6 123 aa20.57■□□□□ 0.88
TVP23A-209ENST00000575135 TBC1D2Q9BYX2 928 aa20.57■□□□□ 0.88
TVP23A-209ENST00000575135 AATFQ9NY61 560 aaKnown RBP eCLIP20.57■□□□□ 0.88
TVP23A-209ENST00000575135 HERC5Q9UII4 1024 aaKnown RBP20.57■□□□□ 0.88
TVP23A-209ENST00000575135 GCLCP48506 637 aaPredicted RBP20.56■□□□□ 0.88
TVP23A-209ENST00000575135 PABPC4Q13310 644 aaKnown RBP eCLIP20.56■□□□□ 0.88
TVP23A-209ENST00000575135 POLA2Q14181 598 aa20.56■□□□□ 0.88
TVP23A-209ENST00000575135 TNNI3KQ59H18 835 aa20.56■□□□□ 0.88
TVP23A-209ENST00000575135 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
TVP23A-209ENST00000575135 DBNDD2Q9BQY9 259 aa20.56■□□□□ 0.88
TVP23A-209ENST00000575135 GPR108Q9NPR9 543 aa20.56■□□□□ 0.88
TVP23A-209ENST00000575135 RBM27Q9P2N5 1060 aaKnown RBP20.56■□□□□ 0.88
TVP23A-209ENST00000575135 PI4KBQ9UBF8 816 aa20.56■□□□□ 0.88
TVP23A-209ENST00000575135 FPGT-TNNI3KV9GXZ4 949 aa20.56■□□□□ 0.88
TVP23A-209ENST00000575135 BAG3O95817 575 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 PPP4CP60510 307 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 SH3D19Q5HYK7 790 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 CCDC158Q5M9N0 1113 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 ADGRA1Q86SQ6 560 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 ASCC2Q9H1I8 757 aaPredicted RBP20.55■□□□□ 0.88
TVP23A-209ENST00000575135 AS3MTQ9HBK9 375 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 PAK6Q9NQU5 681 aaPredicted RBP20.55■□□□□ 0.88
TVP23A-209ENST00000575135 NR2E3Q9Y5X4 410 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 SIPA1L1O43166 1804 aa20.55■□□□□ 0.88
TVP23A-209ENST00000575135 CYP2E1P05181 493 aaPredicted RBP20.54■□□□□ 0.88
TVP23A-209ENST00000575135 JAG1P78504 1218 aa20.54■□□□□ 0.88
TVP23A-209ENST00000575135 OS9Q13438 667 aaPredicted RBP20.54■□□□□ 0.88
TVP23A-209ENST00000575135 ZKSCAN2Q63HK3 967 aa20.54■□□□□ 0.88
TVP23A-209ENST00000575135 MAPKAPK5Q8IW41 473 aa20.54■□□□□ 0.88
TVP23A-209ENST00000575135 TGFBRAP1Q8WUH2 860 aa20.54■□□□□ 0.88
TVP23A-209ENST00000575135 WDR18Q9BV38 432 aa20.54■□□□□ 0.88
TVP23A-209ENST00000575135 DHX36Q9H2U1 1008 aaKnown RBP20.54■□□□□ 0.88
TVP23A-209ENST00000575135 ZBTB7BO15156 539 aaPredicted RBP20.53■□□□□ 0.88
TVP23A-209ENST00000575135 SURF6O75683 361 aaKnown RBP20.53■□□□□ 0.88
TVP23A-209ENST00000575135 PLCG2P16885 1265 aa20.53■□□□□ 0.88
TVP23A-209ENST00000575135 ATP8B2P98198 1209 aa20.53■□□□□ 0.88
TVP23A-209ENST00000575135 MTMR2Q13614 643 aa20.53■□□□□ 0.88
TVP23A-209ENST00000575135 SSH3Q8TE77 659 aa20.53■□□□□ 0.88
TVP23A-209ENST00000575135 GJD2Q9UKL4 321 aa20.53■□□□□ 0.88
TVP23A-209ENST00000575135 CDK5RAP2Q96SN8 1893 aa20.53■□□□□ 0.88
TVP23A-209ENST00000575135 MYO5AQ9Y4I1 1855 aaKnown RBP20.53■□□□□ 0.88
TVP23A-209ENST00000575135 MAST2Q6P0Q8 1798 aa20.52■□□□□ 0.88
TVP23A-209ENST00000575135 BACE1P56817 501 aa20.52■□□□□ 0.88
TVP23A-209ENST00000575135 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
TVP23A-209ENST00000575135 PRO3102Q9H379 93 aa20.52■□□□□ 0.88
TVP23A-209ENST00000575135 C1orf115Q9H7X2 142 aa20.52■□□□□ 0.88
TVP23A-209ENST00000575135 DNAJC18Q9H819 358 aa20.52■□□□□ 0.88
TVP23A-209ENST00000575135 PALD1Q9ULE6 856 aa20.52■□□□□ 0.88
TVP23A-209ENST00000575135 FLT1P17948 1338 aa20.52■□□□□ 0.87
TVP23A-209ENST00000575135 ASNSP08243 561 aa20.51■□□□□ 0.87
TVP23A-209ENST00000575135 CAPN2P17655 700 aa20.51■□□□□ 0.87
TVP23A-209ENST00000575135 SHROOM1Q2M3G4 852 aaPredicted RBP20.51■□□□□ 0.87
TVP23A-209ENST00000575135 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
TVP23A-209ENST00000575135 FOXP4Q8IVH2 680 aaPredicted RBP20.51■□□□□ 0.87
TVP23A-209ENST00000575135 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.51■□□□□ 0.87
TVP23A-209ENST00000575135 PIH1D3Q9NQM4 214 aaKnown RBP20.51■□□□□ 0.87
TVP23A-209ENST00000575135 EVI5O60447 810 aa20.5■□□□□ 0.87
TVP23A-209ENST00000575135 ZAP70P43403 619 aa20.5■□□□□ 0.87
TVP23A-209ENST00000575135 CRACR2BQ8N4Y2 399 aaPredicted RBP20.5■□□□□ 0.87
TVP23A-209ENST00000575135 PAWRQ96IZ0 340 aaKnown RBP20.5■□□□□ 0.87
TVP23A-209ENST00000575135 ZNF512BQ96KM6 892 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms