RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 DDX60LQ5H9U9 1706 aaKnown RBP33.59■■■□□ 2.97
SCARF1-207ENST00000573867 CCL15-CCL14A0A0B4J2E2 113 aa33.59■■■□□ 2.97
SCARF1-207ENST00000573867 GTF2A2P52657 109 aa33.59■■■□□ 2.97
SCARF1-207ENST00000573867 CCL15Q16663 113 aa33.59■■■□□ 2.97
SCARF1-207ENST00000573867 PI4KBQ9UBF8 816 aa33.59■■■□□ 2.97
SCARF1-207ENST00000573867 CASP8AP2Q9UKL3 1982 aa33.58■■■□□ 2.97
SCARF1-207ENST00000573867 MX1P20591 662 aa33.58■■■□□ 2.97
SCARF1-207ENST00000573867 USP5P45974 858 aa33.58■■■□□ 2.97
SCARF1-207ENST00000573867 METTL16Q86W50 562 aaKnown RBP33.58■■■□□ 2.97
SCARF1-207ENST00000573867 TNS4Q8IZW8 715 aa33.58■■■□□ 2.97
SCARF1-207ENST00000573867 CFHR5Q9BXR6 569 aa33.58■■■□□ 2.97
SCARF1-207ENST00000573867 DDX24Q9GZR7 859 aaKnown RBP eCLIP33.58■■■□□ 2.973e-6■■■■■ 34.1
SCARF1-207ENST00000573867 RWDD1Q9H446 243 aaPredicted RBP33.58■■■□□ 2.97
SCARF1-207ENST00000573867 MYH7P12883 1935 aa33.57■■■□□ 2.97
SCARF1-207ENST00000573867 DOCK1Q14185 1865 aa33.57■■■□□ 2.96
SCARF1-207ENST00000573867 KBTBD3Q8NAB2 608 aa33.57■■■□□ 2.96
SCARF1-207ENST00000573867 ARMT1Q9H993 441 aa33.57■■■□□ 2.96
SCARF1-207ENST00000573867 CTNND1O60716 968 aaKnown RBP33.56■■■□□ 2.96
SCARF1-207ENST00000573867 PTPRAP18433 802 aa33.56■■■□□ 2.96
SCARF1-207ENST00000573867 UBE3CQ15386 1083 aa33.56■■■□□ 2.96
SCARF1-207ENST00000573867 CCDC84Q86UT8 332 aaPredicted RBP33.56■■■□□ 2.96
SCARF1-207ENST00000573867 HERC5Q9UII4 1024 aaKnown RBP33.56■■■□□ 2.96
SCARF1-207ENST00000573867 KCNH4Q9UQ05 1017 aa33.56■■■□□ 2.96
SCARF1-207ENST00000573867 MBD4O95243 580 aa33.55■■■□□ 2.96
SCARF1-207ENST00000573867 MYH1P12882 1939 aa33.54■■■□□ 2.96
SCARF1-207ENST00000573867 ALDH1A1P00352 501 aa33.54■■■□□ 2.96
SCARF1-207ENST00000573867 SNAPC2Q13487 334 aa33.54■■■□□ 2.96
SCARF1-207ENST00000573867 FAM43AQ8N2R8 423 aa33.54■■■□□ 2.96
SCARF1-207ENST00000573867 SDR42E1Q8WUS8 393 aa33.54■■■□□ 2.96
SCARF1-207ENST00000573867 GLRX3O76003 335 aaKnown RBP33.53■■■□□ 2.96
SCARF1-207ENST00000573867 JAG1P78504 1218 aa33.53■■■□□ 2.96
SCARF1-207ENST00000573867 EVX2Q03828 476 aa33.53■■■□□ 2.96
SCARF1-207ENST00000573867 MOGSQ13724 837 aa33.53■■■□□ 2.96
SCARF1-207ENST00000573867 B4GALNT3Q6L9W6 998 aa33.53■■■□□ 2.96
SCARF1-207ENST00000573867 CRNKL1Q9BZJ0 848 aaKnown RBP33.53■■■□□ 2.96
SCARF1-207ENST00000573867 LNPKQ9C0E8 428 aa33.53■■■□□ 2.96
SCARF1-207ENST00000573867 PUS7LQ9H0K6 701 aaKnown RBP33.53■■■□□ 2.96
SCARF1-207ENST00000573867 PICK1Q9NRD5 415 aa33.53■■■□□ 2.96
SCARF1-207ENST00000573867 ZHX2Q9Y6X8 837 aa33.53■■■□□ 2.96
SCARF1-207ENST00000573867 NAV1Q8NEY1 1877 aa33.52■■■□□ 2.96
SCARF1-207ENST00000573867 PHIPQ8WWQ0 1821 aa33.52■■■□□ 2.96
SCARF1-207ENST00000573867 ERC2O15083 957 aa33.52■■■□□ 2.96
SCARF1-207ENST00000573867 PRKAB2O43741 272 aa33.52■■■□□ 2.96
SCARF1-207ENST00000573867 CETPP11597 493 aa33.52■■■□□ 2.96
SCARF1-207ENST00000573867 SHROOM1Q2M3G4 852 aaPredicted RBP33.52■■■□□ 2.96
SCARF1-207ENST00000573867 ZBTB47Q9UFB7 747 aaPredicted RBP33.52■■■□□ 2.96
SCARF1-207ENST00000573867 STAP2Q9UGK3 403 aa33.52■■■□□ 2.96
SCARF1-207ENST00000573867 BTBD19C9JJ37 291 aa33.51■■■□□ 2.95
SCARF1-207ENST00000573867 GPR25O00155 361 aa33.51■■■□□ 2.95
SCARF1-207ENST00000573867 CAP2P40123 477 aa33.51■■■□□ 2.95
SCARF1-207ENST00000573867 CRHR2Q13324 411 aa33.51■■■□□ 2.95
SCARF1-207ENST00000573867 FOXP4Q8IVH2 680 aaPredicted RBP33.51■■■□□ 2.95
SCARF1-207ENST00000573867 HLA-DOAP06340 250 aa33.5■■■□□ 2.95
SCARF1-207ENST00000573867 PLCD1P51178 756 aa33.5■■■□□ 2.95
SCARF1-207ENST00000573867 PDE1AP54750 535 aa33.5■■■□□ 2.95
SCARF1-207ENST00000573867 ZSCAN25Q6NSZ9 544 aa33.5■■■□□ 2.95
SCARF1-207ENST00000573867 ZNF296Q8WUU4 475 aaPredicted RBP33.5■■■□□ 2.95
SCARF1-207ENST00000573867 DCP1AQ9NPI6 582 aaPredicted RBP33.5■■■□□ 2.95
SCARF1-207ENST00000573867 AFG3L2Q9Y4W6 797 aa33.5■■■□□ 2.95
SCARF1-207ENST00000573867 CRACR2BQ8N4Y2 399 aaPredicted RBP33.49■■■□□ 2.95
SCARF1-207ENST00000573867 ATAD5Q96QE3 1844 aa33.49■■■□□ 2.95
SCARF1-207ENST00000573867 NUCB1Q02818 461 aa33.48■■■□□ 2.95
SCARF1-207ENST00000573867 NOM1Q5C9Z4 860 aaKnown RBP33.48■■■□□ 2.95
SCARF1-207ENST00000573867 OTUD7BQ6GQQ9 843 aa33.48■■■□□ 2.95
SCARF1-207ENST00000573867 OSBP2Q969R2 916 aa33.48■■■□□ 2.95
SCARF1-207ENST00000573867 CXCL11O14625 94 aa33.47■■■□□ 2.95
SCARF1-207ENST00000573867 EHD4Q9H223 541 aa33.47■■■□□ 2.95
SCARF1-207ENST00000573867 RNF113AO15541 343 aaKnown RBP33.46■■■□□ 2.95
SCARF1-207ENST00000573867 CYP2D6P10635 497 aa33.46■■■□□ 2.95
SCARF1-207ENST00000573867 CHD1LQ86WJ1 897 aa33.46■■■□□ 2.95
SCARF1-207ENST00000573867 GDF11O95390 407 aa33.45■■■□□ 2.95
SCARF1-207ENST00000573867 APPBP2Q92624 585 aa33.45■■■□□ 2.95
SCARF1-207ENST00000573867 MCM9Q9NXL9 1143 aa33.45■■■□□ 2.95
SCARF1-207ENST00000573867 SERPINB13Q9UIV8 391 aa33.45■■■□□ 2.95
SCARF1-207ENST00000573867 A0A0G2JLL6 359 aaPredicted RBP33.44■■■□□ 2.94
SCARF1-207ENST00000573867 TAF1CQ15572 869 aaPredicted RBP33.44■■■□□ 2.94
SCARF1-207ENST00000573867 GPAT2Q6NUI2 795 aa33.44■■■□□ 2.94
SCARF1-207ENST00000573867 PRRT2Q7Z6L0 340 aaPredicted RBP33.44■■■□□ 2.94
SCARF1-207ENST00000573867 TTC6Q86TZ1 520 aa33.44■■■□□ 2.94
SCARF1-207ENST00000573867 TRIM34Q9BYJ4 488 aa33.44■■■□□ 2.94
SCARF1-207ENST00000573867 TRIM75PA6NK02 468 aa33.43■■■□□ 2.94
SCARF1-207ENST00000573867 SMIM22K7EJ46 135 aa33.43■■■□□ 2.94
SCARF1-207ENST00000573867 POLR3DP05423 398 aaPredicted RBP33.43■■■□□ 2.94
SCARF1-207ENST00000573867 GABPAQ06546 454 aa33.43■■■□□ 2.94
SCARF1-207ENST00000573867 TATDN1Q6P1N9 297 aa33.43■■■□□ 2.94
SCARF1-207ENST00000573867 STRBPQ96SI9 672 aaKnown RBP33.43■■■□□ 2.94
SCARF1-207ENST00000573867 PTPRFP10586 1907 aa33.43■■■□□ 2.94
SCARF1-207ENST00000573867 M0R2C6 588 aa33.42■■■□□ 2.94
SCARF1-207ENST00000573867 ANKRD23Q86SG2 305 aa33.42■■■□□ 2.94
SCARF1-207ENST00000573867 ATP8A2Q9NTI2 1148 aa33.42■■■□□ 2.94
SCARF1-207ENST00000573867 SLC4A4Q9Y6R1 1079 aa33.42■■■□□ 2.94
SCARF1-207ENST00000573867 FKTNO75072 461 aa33.41■■■□□ 2.94
SCARF1-207ENST00000573867 ZFYP08048 801 aaPredicted RBP33.41■■■□□ 2.94
SCARF1-207ENST00000573867 SHMT1P34896 483 aa33.41■■■□□ 2.94
SCARF1-207ENST00000573867 SEC62Q99442 399 aaKnown RBP33.41■■■□□ 2.94
SCARF1-207ENST00000573867 FSD1Q9BTV5 496 aa33.41■■■□□ 2.94
SCARF1-207ENST00000573867 MCOLN1Q9GZU1 580 aa33.41■■■□□ 2.94
SCARF1-207ENST00000573867 ZCCHC17Q9NP64 241 aaKnown RBP33.41■■■□□ 2.94
SCARF1-207ENST00000573867 DGKZQ13574 1117 aa33.4■■■□□ 2.94
SCARF1-207ENST00000573867 IFFO2Q5TF58 517 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms