RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 COLQQ9Y215 455 aaPredicted RBP27.08■■□□□ 1.93
SNF8-216ENST00000573795 H0YGN5 161 aa27.07■■□□□ 1.92
SNF8-216ENST00000573795 UQCRFS1P1P0C7P4 283 aa27.07■■□□□ 1.92
SNF8-216ENST00000573795 SLAIN1Q8ND83 568 aa27.07■■□□□ 1.92
SNF8-216ENST00000573795 SH3RF3Q8TEJ3 882 aaPredicted RBP27.07■■□□□ 1.92
SNF8-216ENST00000573795 FLT3LGP49771 235 aa27.06■■□□□ 1.92
SNF8-216ENST00000573795 FXR1P51114 621 aaKnown RBP eCLIP27.06■■□□□ 1.92
SNF8-216ENST00000573795 TEX11Q8IYF3 940 aa27.06■■□□□ 1.92
SNF8-216ENST00000573795 SMCR8Q8TEV9 937 aaPredicted RBP27.06■■□□□ 1.92
SNF8-216ENST00000573795 RNF208Q9H0X6 261 aa27.06■■□□□ 1.92
SNF8-216ENST00000573795 GPR108Q9NPR9 543 aa27.06■■□□□ 1.92
SNF8-216ENST00000573795 RANBP2P49792 3224 aaKnown RBP27.06■■□□□ 1.92
SNF8-216ENST00000573795 TNNI3KQ59H18 835 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 NKX2-3Q8TAU0 364 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 SSH3Q8TE77 659 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 DBNDD2Q9BQY9 259 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 UNC93B1Q9H1C4 597 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 SNRKQ9NRH2 765 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 LRP2BPQ9P2M1 347 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 FPGT-TNNI3KV9GXZ4 949 aa27.05■■□□□ 1.92
SNF8-216ENST00000573795 TRIOBPQ9H2D6 2365 aa27.04■■□□□ 1.92
SNF8-216ENST00000573795 ADCY3O60266 1144 aa27.04■■□□□ 1.92
SNF8-216ENST00000573795 CAP2P40123 477 aa27.04■■□□□ 1.92
SNF8-216ENST00000573795 UBXN2AP68543 259 aa27.04■■□□□ 1.92
SNF8-216ENST00000573795 SPP2Q13103 211 aa27.04■■□□□ 1.92
SNF8-216ENST00000573795 ZKSCAN2Q63HK3 967 aa27.04■■□□□ 1.92
SNF8-216ENST00000573795 ADGRA1Q86SQ6 560 aa27.04■■□□□ 1.92
SNF8-216ENST00000573795 PROCA1Q8NCQ7 364 aaPredicted RBP27.04■■□□□ 1.92
SNF8-216ENST00000573795 BIN2Q9UBW5 565 aaPredicted RBP27.04■■□□□ 1.92
SNF8-216ENST00000573795 TNPO2O14787 897 aaKnown RBP27.03■■□□□ 1.92
SNF8-216ENST00000573795 ELNP15502 786 aa27.03■■□□□ 1.92
SNF8-216ENST00000573795 ANKRD13CQ8N6S4 541 aa27.03■■□□□ 1.92
SNF8-216ENST00000573795 ZNF280CQ8ND82 737 aa27.03■■□□□ 1.92
SNF8-216ENST00000573795 SZT2Q5T011 3432 aa27.02■■□□□ 1.92
SNF8-216ENST00000573795 CYP2E1P05181 493 aaPredicted RBP27.02■■□□□ 1.92
SNF8-216ENST00000573795 IRF5Q13568 498 aa27.02■■□□□ 1.92
SNF8-216ENST00000573795 U2AF1L4Q8WU68 220 aaKnown RBP27.02■■□□□ 1.92
SNF8-216ENST00000573795 C1orf115Q9H7X2 142 aa27.02■■□□□ 1.92
SNF8-216ENST00000573795 AATFQ9NY61 560 aaKnown RBP eCLIP27.02■■□□□ 1.928e-6■■■■□ 21.3
SNF8-216ENST00000573795 INHAP05111 366 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 HMGCS2P54868 508 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 ATP8B2P98198 1209 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 FAM110CQ1W6H9 321 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 TTC39AQ5SRH9 613 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 NAA16Q6N069 864 aaPredicted RBP27.01■■□□□ 1.91
SNF8-216ENST00000573795 PXYLP1Q8TE99 480 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 DNAJC18Q9H819 358 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 HERC5Q9UII4 1024 aaKnown RBP27.01■■□□□ 1.91
SNF8-216ENST00000573795 PNMA3Q9UL41 463 aa27.01■■□□□ 1.91
SNF8-216ENST00000573795 PPP4CP60510 307 aa27■■□□□ 1.91
SNF8-216ENST00000573795 JAG1P78504 1218 aa27■■□□□ 1.91
SNF8-216ENST00000573795 TBC1D2Q9BYX2 928 aa27■■□□□ 1.91
SNF8-216ENST00000573795 USP17L5A8MUK1 530 aa26.99■■□□□ 1.91
SNF8-216ENST00000573795 SH3D19Q5HYK7 790 aa26.99■■□□□ 1.91
SNF8-216ENST00000573795 PI4KBQ9UBF8 816 aa26.99■■□□□ 1.91
SNF8-216ENST00000573795 PLXNB2O15031 1838 aa26.99■■□□□ 1.91
SNF8-216ENST00000573795 FLT1P17948 1338 aa26.98■■□□□ 1.91
SNF8-216ENST00000573795 SGPL1O95470 568 aa26.98■■□□□ 1.91
SNF8-216ENST00000573795 RLBP1P12271 317 aa26.98■■□□□ 1.91
SNF8-216ENST00000573795 SHROOM1Q2M3G4 852 aaPredicted RBP26.98■■□□□ 1.91
SNF8-216ENST00000573795 METTL16Q86W50 562 aaKnown RBP26.98■■□□□ 1.91
SNF8-216ENST00000573795 MAPKAPK5Q8IW41 473 aa26.98■■□□□ 1.91
SNF8-216ENST00000573795 ZNF512BQ96KM6 892 aaPredicted RBP26.98■■□□□ 1.91
SNF8-216ENST00000573795 PIH1D3Q9NQM4 214 aaKnown RBP26.98■■□□□ 1.91
SNF8-216ENST00000573795 TLR7Q9NYK1 1049 aaKnown RBP26.98■■□□□ 1.91
SNF8-216ENST00000573795 DBNLQ9UJU6 430 aaKnown RBP26.98■■□□□ 1.91
SNF8-216ENST00000573795 NOP58Q9Y2X3 529 aaKnown RBP26.98■■□□□ 1.91
SNF8-216ENST00000573795 SURF6O75683 361 aaKnown RBP26.97■■□□□ 1.91
SNF8-216ENST00000573795 ZAP70P43403 619 aa26.97■■□□□ 1.91
SNF8-216ENST00000573795 CCDC158Q5M9N0 1113 aa26.97■■□□□ 1.91
SNF8-216ENST00000573795 TGFBRAP1Q8WUH2 860 aa26.97■■□□□ 1.91
SNF8-216ENST00000573795 DPF3Q92784 378 aa26.97■■□□□ 1.91
SNF8-216ENST00000573795 NOL10Q9BSC4 688 aaKnown RBP26.97■■□□□ 1.91
SNF8-216ENST00000573795 ASCC2Q9H1I8 757 aaPredicted RBP26.97■■□□□ 1.91
SNF8-216ENST00000573795 DHX36Q9H2U1 1008 aaKnown RBP26.97■■□□□ 1.91
SNF8-216ENST00000573795 FARP2O94887 1054 aaPredicted RBP26.96■■□□□ 1.91
SNF8-216ENST00000573795 BAG3O95817 575 aa26.96■■□□□ 1.91
SNF8-216ENST00000573795 OS9Q13438 667 aaPredicted RBP26.96■■□□□ 1.91
SNF8-216ENST00000573795 COA7Q96BR5 231 aa26.96■■□□□ 1.91
SNF8-216ENST00000573795 WDR18Q9BV38 432 aa26.96■■□□□ 1.91
SNF8-216ENST00000573795 PAK6Q9NQU5 681 aaPredicted RBP26.96■■□□□ 1.91
SNF8-216ENST00000573795 PLCG2P16885 1265 aa26.95■■□□□ 1.9
SNF8-216ENST00000573795 GCLCP48506 637 aaPredicted RBP26.95■■□□□ 1.9
SNF8-216ENST00000573795 CHRDL2Q6WN34 429 aa26.95■■□□□ 1.9
SNF8-216ENST00000573795 ALPK3Q96L96 1907 aa26.94■■□□□ 1.9
SNF8-216ENST00000573795 ZBTB7BO15156 539 aaPredicted RBP26.94■■□□□ 1.9
SNF8-216ENST00000573795 PABPC4Q13310 644 aaKnown RBP eCLIP26.94■■□□□ 1.92e-8■■■□□ 14.8
SNF8-216ENST00000573795 MTMR2Q13614 643 aa26.94■■□□□ 1.9
SNF8-216ENST00000573795 AS3MTQ9HBK9 375 aa26.94■■□□□ 1.9
SNF8-216ENST00000573795 PALD1Q9ULE6 856 aa26.94■■□□□ 1.9
SNF8-216ENST00000573795 MYH1P12882 1939 aa26.93■■□□□ 1.9
SNF8-216ENST00000573795 BACE1P56817 501 aa26.93■■□□□ 1.9
SNF8-216ENST00000573795 DYNLL1P63167 89 aaKnown RBP26.93■■□□□ 1.9
SNF8-216ENST00000573795 EAF2Q96CJ1 260 aaPredicted RBP26.93■■□□□ 1.9
SNF8-216ENST00000573795 DEFB118Q96PH6 123 aa26.93■■□□□ 1.9
SNF8-216ENST00000573795 HTATIP2Q9BUP3 242 aa26.93■■□□□ 1.9
SNF8-216ENST00000573795 CCDC8Q9H0W5 538 aaPredicted RBP26.93■■□□□ 1.9
SNF8-216ENST00000573795 GJD2Q9UKL4 321 aa26.93■■□□□ 1.9
SNF8-216ENST00000573795 TAOK2Q9UL54 1235 aa26.93■■□□□ 1.9
SNF8-216ENST00000573795 ASNSP08243 561 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 312.4 ms