RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 PCP11498 1178 aaKnown RBP14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 SEC23AQ15436 765 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 C12orf60Q5U649 245 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 PODNQ7Z5L7 613 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 TTLL6Q8N841 843 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 DYNLL2Q96FJ2 89 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 ATF5Q9Y2D1 282 aaPredicted RBP14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 SUGT1Q9Y2Z0 365 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 FLT1P17948 1338 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 ORC4O43929 436 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 SLC3A2P08195 630 aaKnown RBP14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 PDIA4P13667 645 aaKnown RBP14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 KCNA3P22001 575 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 GUCY1B3Q02153 619 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 FAM47AQ5JRC9 791 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 CERS3Q8IU89 383 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 ENAHQ8N8S7 591 aaPredicted RBP14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 GPT2Q8TD30 523 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 CHMP4CQ96CF2 233 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 ORC3Q9UBD5 711 aaPredicted RBP14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 KIF3AQ9Y496 699 aa14.07□□□□□ -0.16
TOM1L1-213ENST00000572405 NMT2O60551 498 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 PLCG2P16885 1265 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 USP48Q86UV5 1035 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 ZSCAN10Q96SZ4 725 aaPredicted RBP14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 FAM217BQ9NTX9 383 aaPredicted RBP14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 ZNF646O15015 1829 aaPredicted RBP14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 PLCD1P51178 756 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 PDE4BQ07343 736 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 KIAA2012Q0VF49 1180 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 ZNF654Q8IZM8 581 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 SLC44A5Q8NCS7 719 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 PHKBQ93100 1093 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 MTA3Q9BTC8 594 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 ROBO3Q96MS0 1386 aa14.06□□□□□ -0.16
TOM1L1-213ENST00000572405 PPIP5K2O43314 1243 aa14.05□□□□□ -0.16
TOM1L1-213ENST00000572405 RESTQ13127 1097 aa14.05□□□□□ -0.16
TOM1L1-213ENST00000572405 CC2D2BQ6DHV5 1058 aa14.05□□□□□ -0.16
TOM1L1-213ENST00000572405 SYNE3Q6ZMZ3 975 aa14.05□□□□□ -0.16
TOM1L1-213ENST00000572405 IQCA1Q86XH1 822 aa14.05□□□□□ -0.16
TOM1L1-213ENST00000572405 AMOTL1Q8IY63 956 aa14.05□□□□□ -0.16
TOM1L1-213ENST00000572405 GADD45BO75293 160 aaPredicted RBP14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 POLR3DP05423 398 aaPredicted RBP14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 R3HDM1Q15032 1099 aaKnown RBP14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 CCDC93Q567U6 631 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 DACT2Q5SW24 774 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 OTUD7BQ6GQQ9 843 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 KIAA0825Q8IV33 1275 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 NUP133Q8WUM0 1156 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 GJB4Q9NTQ9 266 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 FOCADQ5VW36 1801 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 ECM29Q5VYK3 1845 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 NID2Q14112 1375 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 TSPY2A6NKD2 308 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 PICALMQ13492 652 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 NTRK3Q16288 839 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 TPRNQ4KMQ1 711 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 IFIT1BQ5T764 474 aaKnown RBP14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 STRIP1Q5VSL9 837 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 TMEM87AQ8NBN3 555 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 AIFM3Q96NN9 605 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 TAOK2Q9UL54 1235 aa14.04□□□□□ -0.16
TOM1L1-213ENST00000572405 MYH1P12882 1939 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 CDKL5O76039 1030 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 RTN1Q16799 776 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 CAVIN1Q6NZI2 390 aaKnown RBP14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 TMTC2Q8N394 836 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 SUPT20HQ8NEM7 779 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 PCDHAC2Q9Y5I4 1007 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 USP17L3A6NCW0 530 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 USP17L4A6NCW7 530 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 YDJCA8MPS7 323 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 UBE2Q2LH0YL09 131 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 CPLX2Q6PUV4 134 aaKnown RBP14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 USP17L1Q7RTZ2 530 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 TEKT1Q969V4 418 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 C8orf76Q96K31 380 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 DDX4Q9NQI0 724 aaKnown RBP14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 RBM27Q9P2N5 1060 aaKnown RBP14.03□□□□□ -0.16
TOM1L1-213ENST00000572405 POLD1P28340 1107 aa14.02□□□□□ -0.16
TOM1L1-213ENST00000572405 CRKP46108 304 aa14.02□□□□□ -0.16
TOM1L1-213ENST00000572405 CMTR1Q8N1G2 835 aaKnown RBP14.02□□□□□ -0.16
TOM1L1-213ENST00000572405 MKNK2Q9HBH9 465 aa14.02□□□□□ -0.16
TOM1L1-213ENST00000572405 COL4A5P29400 1685 aa14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 WDHD1O75717 1129 aaPredicted RBP14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 KRT85P78386 507 aa14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 TFAP4Q01664 338 aa14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 APOBEC3HQ6NTF7 200 aaKnown RBP14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 HHIPL2Q6UWX4 724 aa14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 SLC26A6Q9BXS9 759 aa14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 ZNF277Q9NRM2 450 aaPredicted RBP14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 USP40Q9NVE5 1235 aa14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 PPP1R1BQ9UD71 204 aaPredicted RBP14.02□□□□□ -0.17
TOM1L1-213ENST00000572405 IARSP41252 1262 aaKnown RBP14.01□□□□□ -0.17
TOM1L1-213ENST00000572405 CDC42EP5Q6NZY7 148 aa14.01□□□□□ -0.17
TOM1L1-213ENST00000572405 RTKN2Q8IZC4 609 aa14.01□□□□□ -0.17
TOM1L1-213ENST00000572405 CCDC82Q8N4S0 544 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms