RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 TCRBV5S4A2TA0A5A2 114 aa24.39■■□□□ 1.49
NUP88-204ENST00000572290 BTBD19C9JJ37 291 aa24.39■■□□□ 1.49
NUP88-204ENST00000572290 CXCL11O14625 94 aa24.39■■□□□ 1.49
NUP88-204ENST00000572290 HLA-DOAP06340 250 aa24.39■■□□□ 1.49
NUP88-204ENST00000572290 TAF1CQ15572 869 aaPredicted RBP24.39■■□□□ 1.49
NUP88-204ENST00000572290 FOXP4Q8IVH2 680 aaPredicted RBP24.39■■□□□ 1.49
NUP88-204ENST00000572290 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.39■■□□□ 1.49
NUP88-204ENST00000572290 ZFYVE28Q9HCC9 887 aa24.39■■□□□ 1.49
NUP88-204ENST00000572290 ZCCHC17Q9NP64 241 aaKnown RBP24.39■■□□□ 1.49
NUP88-204ENST00000572290 CRACR2BQ8N4Y2 399 aaPredicted RBP24.38■■□□□ 1.49
NUP88-204ENST00000572290 TRIM34Q9BYJ4 488 aa24.38■■□□□ 1.49
NUP88-204ENST00000572290 DOCK2Q92608 1830 aa24.38■■□□□ 1.49
NUP88-204ENST00000572290 ADD2P35612 726 aa24.37■■□□□ 1.49
NUP88-204ENST00000572290 HDAC1Q13547 482 aaPredicted RBP24.37■■□□□ 1.49
NUP88-204ENST00000572290 METTL16Q86W50 562 aaKnown RBP24.37■■□□□ 1.49
NUP88-204ENST00000572290 CAP2P40123 477 aa24.36■■□□□ 1.49
NUP88-204ENST00000572290 TSHZ3Q63HK5 1081 aa24.36■■□□□ 1.49
NUP88-204ENST00000572290 ANKRD23Q86SG2 305 aa24.36■■□□□ 1.49
NUP88-204ENST00000572290 CRNKL1Q9BZJ0 848 aaKnown RBP24.36■■□□□ 1.49
NUP88-204ENST00000572290 ZBTB47Q9UFB7 747 aaPredicted RBP24.36■■□□□ 1.49
NUP88-204ENST00000572290 AFG3L2Q9Y4W6 797 aa24.36■■□□□ 1.49
NUP88-204ENST00000572290 LAMB1P07942 1786 aa24.35■■□□□ 1.49
NUP88-204ENST00000572290 RRP1BQ14684 758 aaKnown RBP24.35■■□□□ 1.49
NUP88-204ENST00000572290 SLC4A8Q2Y0W8 1093 aa24.35■■□□□ 1.49
NUP88-204ENST00000572290 ZSCAN25Q6NSZ9 544 aa24.35■■□□□ 1.49
NUP88-204ENST00000572290 GCC1Q96CN9 775 aa24.35■■□□□ 1.49
NUP88-204ENST00000572290 DNAJC18Q9H819 358 aa24.35■■□□□ 1.49
NUP88-204ENST00000572290 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.35■■□□□ 1.49
NUP88-204ENST00000572290 SUPT16HQ9Y5B9 1047 aaKnown RBP24.35■■□□□ 1.49
NUP88-204ENST00000572290 AK9Q5TCS8 1911 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 MOGSQ13724 837 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 UBE3CQ15386 1083 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 SLFNL1Q499Z3 407 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 CCDC84Q86UT8 332 aaPredicted RBP24.34■■□□□ 1.49
NUP88-204ENST00000572290 LCORLQ8N3X6 602 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 EXOC6Q8TAG9 804 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 CASP8AP2Q9UKL3 1982 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 TTC41PQ6P2S7 1318 aa24.34■■□□□ 1.49
NUP88-204ENST00000572290 A0A0G2JLL6 359 aaPredicted RBP24.33■■□□□ 1.49
NUP88-204ENST00000572290 SP3Q02447 781 aa24.33■■□□□ 1.49
NUP88-204ENST00000572290 ANKRD45Q5TZF3 282 aa24.33■■□□□ 1.49
NUP88-204ENST00000572290 FASTKD5Q7L8L6 764 aaKnown RBP24.33■■□□□ 1.49
NUP88-204ENST00000572290 PRRT2Q7Z6L0 340 aaPredicted RBP24.33■■□□□ 1.49
NUP88-204ENST00000572290 TTC6Q86TZ1 520 aa24.33■■□□□ 1.49
NUP88-204ENST00000572290 ARMT1Q9H993 441 aa24.33■■□□□ 1.49
NUP88-204ENST00000572290 TRIM75PA6NK02 468 aa24.32■■□□□ 1.48
NUP88-204ENST00000572290 PDHXO00330 501 aa24.32■■□□□ 1.48
NUP88-204ENST00000572290 ERC2O15083 957 aa24.32■■□□□ 1.48
NUP88-204ENST00000572290 PKN2Q16513 984 aaKnown RBP24.32■■□□□ 1.48
NUP88-204ENST00000572290 OTUD7AQ8TE49 926 aaPredicted RBP24.32■■□□□ 1.48
NUP88-204ENST00000572290 ERO1AQ96HE7 468 aa24.32■■□□□ 1.48
NUP88-204ENST00000572290 TBC1D2Q9BYX2 928 aa24.32■■□□□ 1.48
NUP88-204ENST00000572290 MYO5AQ9Y4I1 1855 aaKnown RBP24.32■■□□□ 1.48
NUP88-204ENST00000572290 USP17L5A8MUK1 530 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 TLR2O60603 784 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 MBD4O95243 580 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 CHGBP05060 677 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 GPAT2Q6NUI2 795 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 KBTBD3Q8NAB2 608 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 EHD4Q9H223 541 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 SERPINB13Q9UIV8 391 aa24.31■■□□□ 1.48
NUP88-204ENST00000572290 CCDC85CA6NKD9 419 aa24.3■■□□□ 1.48
NUP88-204ENST00000572290 POLR3DP05423 398 aaPredicted RBP24.3■■□□□ 1.48
NUP88-204ENST00000572290 ASNSP08243 561 aa24.3■■□□□ 1.48
NUP88-204ENST00000572290 GADL1Q6ZQY3 521 aa24.3■■□□□ 1.48
NUP88-204ENST00000572290 CD99L2Q8TCZ2 262 aa24.3■■□□□ 1.48
NUP88-204ENST00000572290 SDR42E1Q8WUS8 393 aa24.3■■□□□ 1.48
NUP88-204ENST00000572290 RWDD1Q9H446 243 aaPredicted RBP24.3■■□□□ 1.48
NUP88-204ENST00000572290 GINM1Q9NU53 330 aa24.3■■□□□ 1.48
NUP88-204ENST00000572290 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
NUP88-204ENST00000572290 MX1P20591 662 aa24.29■■□□□ 1.48
NUP88-204ENST00000572290 SPP2Q13103 211 aa24.29■■□□□ 1.48
NUP88-204ENST00000572290 ZNF280CQ8ND82 737 aa24.29■■□□□ 1.48
NUP88-204ENST00000572290 PI4K2BQ8TCG2 481 aa24.29■■□□□ 1.48
NUP88-204ENST00000572290 AS3MTQ9HBK9 375 aa24.29■■□□□ 1.48
NUP88-204ENST00000572290 DCP1AQ9NPI6 582 aaPredicted RBP24.29■■□□□ 1.48
NUP88-204ENST00000572290 MCM9Q9NXL9 1143 aa24.29■■□□□ 1.48
NUP88-204ENST00000572290 TRIM17Q9Y577 477 aa24.29■■□□□ 1.48
NUP88-204ENST00000572290 GDF11O95390 407 aa24.28■■□□□ 1.48
NUP88-204ENST00000572290 PLCD1P51178 756 aa24.28■■□□□ 1.48
NUP88-204ENST00000572290 JAG1P78504 1218 aa24.28■■□□□ 1.48
NUP88-204ENST00000572290 PRKAB2O43741 272 aa24.27■■□□□ 1.48
NUP88-204ENST00000572290 TATDN1Q6P1N9 297 aa24.27■■□□□ 1.48
NUP88-204ENST00000572290 FBXO46Q6PJ61 603 aaPredicted RBP24.27■■□□□ 1.48
NUP88-204ENST00000572290 OTOP1Q7RTM1 612 aa24.27■■□□□ 1.48
NUP88-204ENST00000572290 PARK7Q99497 189 aaKnown RBP24.27■■□□□ 1.48
NUP88-204ENST00000572290 PUS7LQ9H0K6 701 aaKnown RBP24.27■■□□□ 1.48
NUP88-204ENST00000572290 ATP8A2Q9NTI2 1148 aa24.27■■□□□ 1.48
NUP88-204ENST00000572290 ZBTB21Q9ULJ3 1066 aa24.27■■□□□ 1.48
NUP88-204ENST00000572290 SALL3Q9BXA9 1300 aa24.27■■□□□ 1.48
NUP88-204ENST00000572290 WDR18Q9BV38 432 aa24.26■■□□□ 1.47
NUP88-204ENST00000572290 EFCC1Q9HA90 598 aa24.26■■□□□ 1.47
NUP88-204ENST00000572290 SLC45A1Q9Y2W3 748 aa24.26■■□□□ 1.47
NUP88-204ENST00000572290 RNF113AO15541 343 aaKnown RBP24.25■■□□□ 1.47
NUP88-204ENST00000572290 ZFYP08048 801 aaPredicted RBP24.25■■□□□ 1.47
NUP88-204ENST00000572290 ARHGEF6Q15052 776 aa24.25■■□□□ 1.47
NUP88-204ENST00000572290 SHROOM1Q2M3G4 852 aaPredicted RBP24.25■■□□□ 1.47
NUP88-204ENST00000572290 LRRFIP1Q32MZ4 808 aaKnown RBP24.25■■□□□ 1.47
NUP88-204ENST00000572290 C17orf99Q6UX52 265 aa24.25■■□□□ 1.47
NUP88-204ENST00000572290 PROCA1Q8NCQ7 364 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms