RNA–Protein interactions for RNA: ENST00000572158.5

TOM1L1-210, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TOM1L1, Length 1,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-210ENST00000572158 ADCK5Q3MIX3 580 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 ZNF526Q8TF50 670 aaPredicted RBP11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 FAM151AQ8WW52 585 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 IL17RAQ96F46 866 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 DYNLL2Q96FJ2 89 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 GGA3Q9NZ52 723 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 ANAPC4Q9UJX5 808 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 LAMB1P07942 1786 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 RASA3Q14644 834 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 TSGA10IPQ3SY00 556 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 FAM83AQ86UY5 434 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 CTNNA3Q9UI47 895 aa11.6□□□□□ -0.55
TOM1L1-210ENST00000572158 COL2A1P02458 1487 aaPredicted RBP11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 ZNF213O14771 459 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 FGRP09769 529 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 VEGFAP15692 232 aaPredicted RBP11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 GABPAQ06546 454 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 PRAMEF18Q5VWM3 479 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 STK11IPQ8N1F8 1099 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 SLC44A5Q8NCS7 719 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 DEFB129Q9H1M3 183 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 DNAJC18Q9H819 358 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 TMOD2Q9NZR1 351 aa11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 ARPP21Q9UBL0 812 aaPredicted RBP11.59□□□□□ -0.55
TOM1L1-210ENST00000572158 ROBO3Q96MS0 1386 aa11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 E7EWF7 191 aa11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 POLR3DP05423 398 aaPredicted RBP11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 EAPPQ56P03 285 aaPredicted RBP11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 PNMA8AQ86V59 439 aaPredicted RBP11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 METTL16Q86W50 562 aaKnown RBP11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 ZC3H15Q8WU90 426 aaKnown RBP11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 NEDD4P46934 1319 aa11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 PITPNM2Q9BZ72 1349 aa11.58□□□□□ -0.56
TOM1L1-210ENST00000572158 FAM196BA6NMK8 535 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 ADM5C9JUS6 153 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 PRDM1O75626 825 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 CPA1P15085 419 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 NBPF12Q5TAG4 269 aaPredicted RBP11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 STAG1Q8WVM7 1258 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 DDRGK1Q96HY6 314 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 DHX36Q9H2U1 1008 aaKnown RBP11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 TSHZ2Q9NRE2 1034 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 SSC5DA1L4H1 1573 aa11.57□□□□□ -0.56
TOM1L1-210ENST00000572158 CDK8P49336 464 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 ANAPC15P60006 121 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 MAP3K10Q02779 954 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 RRP1BQ14684 758 aaKnown RBP11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 AKNAD1Q5T1N1 836 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 C16orf86Q6ZW13 317 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 TTC6Q86TZ1 520 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 APOBEC3FQ8IUX4 373 aaKnown RBP11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 CSRNP1Q96S65 589 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 EHD4Q9H223 541 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 UPF2Q9HAU5 1272 aaKnown RBP11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 PI4KBQ9UBF8 816 aa11.56□□□□□ -0.56
TOM1L1-210ENST00000572158 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 ZKSCAN1P17029 563 aaPredicted RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 SHMT1P34896 483 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 TNNI2P48788 182 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 JAG1P78504 1218 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 FMR1Q06787 632 aaKnown RBP eCLIP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 TNFAIP1Q13829 316 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 SHROOM1Q2M3G4 852 aaPredicted RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 RNF20Q5VTR2 975 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 MAP1SQ66K74 1059 aaPredicted RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 KRT26Q7Z3Y9 468 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 USP48Q86UV5 1035 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 ZSCAN29Q8IWY8 852 aaPredicted RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 DCPSQ96C86 337 aaKnown RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 GLIS2Q9BZE0 524 aaPredicted RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 SERPINB13Q9UIV8 391 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 FZD1Q9UP38 647 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 ORC4O43929 436 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 RASA1P20936 1047 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 MCCP23508 829 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 ANTXR2P58335 489 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 TATDN1Q6P1N9 297 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 MFSD6Q6ZSS7 791 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 CYB5R4Q7L1T6 521 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 MIGA2Q7L4E1 593 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 FOXP4Q8IVH2 680 aaPredicted RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 MB21D2Q8IYB1 491 aaPredicted RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 JAKMIP1Q96N16 626 aaKnown RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 UPF3BQ9BZI7 483 aaKnown RBP11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
TOM1L1-210ENST00000572158 B4E1Z4 1266 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 TRAF5O00463 557 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 KIF3CO14782 793 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 TBC1D12O60347 775 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 HLA-DOAP06340 250 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 PRKAR2AP13861 404 aaKnown RBP11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 EXOSC10Q01780 885 aaKnown RBP11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 SULF1Q8IWU6 871 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 TCEANC2Q96MN5 208 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 NEK1Q96PY6 1258 aa11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.54□□□□□ -0.56
TOM1L1-210ENST00000572158 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms