RNA–Protein interactions for RNA: ENST00000571958.1

PRPF8-203, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 3

Gene PRPF8, Length 380 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-203ENST00000571958 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRPF8-203ENST00000571958 HDAC5Q9UQL6 1122 aa12.41□□□□□ -0.42
PRPF8-203ENST00000571958 COL2A1P02458 1487 aaPredicted RBP12.4□□□□□ -0.42
PRPF8-203ENST00000571958 DDX60LQ5H9U9 1706 aaKnown RBP12.4□□□□□ -0.42
PRPF8-203ENST00000571958 FOCADQ5VW36 1801 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 SRGAP3O43295 1099 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 TBC1D12O60347 775 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 SPP2Q13103 211 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 PROCA1Q8NCQ7 364 aaPredicted RBP12.4□□□□□ -0.42
PRPF8-203ENST00000571958 DIS3LQ8TF46 1054 aaKnown RBP12.4□□□□□ -0.42
PRPF8-203ENST00000571958 PAWRQ96IZ0 340 aaKnown RBP12.4□□□□□ -0.42
PRPF8-203ENST00000571958 CRISPLD2Q9H0B8 497 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 OSBPL5Q9H0X9 879 aaPredicted RBP12.4□□□□□ -0.42
PRPF8-203ENST00000571958 HMG20BQ9P0W2 317 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 PNMA3Q9UL41 463 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 AKAP2Q9Y2D5 859 aa12.4□□□□□ -0.42
PRPF8-203ENST00000571958 SOX1O00570 391 aaPredicted RBP12.39□□□□□ -0.43
PRPF8-203ENST00000571958 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
PRPF8-203ENST00000571958 HMGCS2P54868 508 aa12.39□□□□□ -0.43
PRPF8-203ENST00000571958 RRP1BQ14684 758 aaKnown RBP12.39□□□□□ -0.43
PRPF8-203ENST00000571958 SPATA5Q8NB90 893 aa12.39□□□□□ -0.43
PRPF8-203ENST00000571958 ZNF280CQ8ND82 737 aa12.39□□□□□ -0.43
PRPF8-203ENST00000571958 NSUN4Q96CB9 384 aaKnown RBP12.39□□□□□ -0.43
PRPF8-203ENST00000571958 NEUROD6Q96NK8 337 aa12.39□□□□□ -0.43
PRPF8-203ENST00000571958 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.39□□□□□ -0.43
PRPF8-203ENST00000571958 MYO5AQ9Y4I1 1855 aaKnown RBP12.39□□□□□ -0.43
PRPF8-203ENST00000571958 LAMA3Q16787 3333 aa12.39□□□□□ -0.43
PRPF8-203ENST00000571958 CT47B1P0C2W7 299 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-203ENST00000571958 MTX1Q13505 466 aa12.38□□□□□ -0.43
PRPF8-203ENST00000571958 ASCC2Q9H1I8 757 aaPredicted RBP12.38□□□□□ -0.43
PRPF8-203ENST00000571958 RAI14Q9P0K7 980 aa12.38□□□□□ -0.43
PRPF8-203ENST00000571958 STAP2Q9UGK3 403 aa12.38□□□□□ -0.43
PRPF8-203ENST00000571958 A0A1W2PPC1 479 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 HMGCRP04035 888 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 LDHCP07864 332 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 GNAI3P08754 354 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 ARID4AP29374 1257 aaPredicted RBP12.37□□□□□ -0.43
PRPF8-203ENST00000571958 CAP2P40123 477 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
PRPF8-203ENST00000571958 GSTO1P78417 241 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 TRIM32Q13049 653 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 NECAB2Q7Z6G3 386 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 TEX11Q8IYF3 940 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 SH3RF3Q8TEJ3 882 aaPredicted RBP12.37□□□□□ -0.43
PRPF8-203ENST00000571958 LRCH3Q96II8 777 aa12.37□□□□□ -0.43
PRPF8-203ENST00000571958 COL6A3P12111 3177 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 USP17L5A8MUK1 530 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 PEX10O60683 326 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 MAP4K4O95819 1239 aaPredicted RBP12.36□□□□□ -0.43
PRPF8-203ENST00000571958 CAPN2P17655 700 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 MCAMP43121 646 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 RARSP54136 660 aaKnown RBP12.36□□□□□ -0.43
PRPF8-203ENST00000571958 PABPC4Q13310 644 aaKnown RBP eCLIP12.36□□□□□ -0.437e-9■■□□□ 13.3
PRPF8-203ENST00000571958 SH3D19Q5HYK7 790 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 C7orf61Q8IZ16 206 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 TBC1D2Q9BYX2 928 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 GJD2Q9UKL4 321 aa12.36□□□□□ -0.43
PRPF8-203ENST00000571958 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-203ENST00000571958 JAG1P78504 1218 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 MTMR2Q13614 643 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 SHROOM1Q2M3G4 852 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-203ENST00000571958 ANKLE1Q8NAG6 615 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 TRIB2Q92519 343 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 AS3MTQ9HBK9 375 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 LRP2BPQ9P2M1 347 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 HERC5Q9UII4 1024 aaKnown RBP12.35□□□□□ -0.43
PRPF8-203ENST00000571958 ZMYND8Q9ULU4 1186 aaPredicted RBP12.35□□□□□ -0.43
PRPF8-203ENST00000571958 TNNQ9UQP3 1299 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 RPTORQ8N122 1335 aa12.35□□□□□ -0.43
PRPF8-203ENST00000571958 FRMPD3Q5JV73 1810 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 PNMA6EA0A0J9YXQ4 647 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 ARHGAP45Q92619 1136 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 NOL10Q9BSC4 688 aaKnown RBP12.34□□□□□ -0.43
PRPF8-203ENST00000571958 NBPF3Q9H094 633 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 DNAJC18Q9H819 358 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 HMX1Q9NP08 348 aaPredicted RBP12.34□□□□□ -0.43
PRPF8-203ENST00000571958 SNRKQ9NRH2 765 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
PRPF8-203ENST00000571958 PI4KBQ9UBF8 816 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 MORF4L1Q9UBU8 362 aa12.34□□□□□ -0.43
PRPF8-203ENST00000571958 MYH1P12882 1939 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 CYP2B6P20813 491 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 BACE1P56817 501 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 IRX3P78415 501 aaPredicted RBP12.33□□□□□ -0.44
PRPF8-203ENST00000571958 NAA16Q6N069 864 aaPredicted RBP12.33□□□□□ -0.44
PRPF8-203ENST00000571958 ADGRA1Q86SQ6 560 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 MAPKAPK5Q8IW41 473 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 SLC17A8Q8NDX2 589 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 P2RX7Q99572 595 aaKnown RBP12.33□□□□□ -0.44
PRPF8-203ENST00000571958 GDF15Q99988 308 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 WDR18Q9BV38 432 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 C11orf49Q9H6J7 331 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 TXNRD2Q9NNW7 524 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 FLT1P17948 1338 aa12.33□□□□□ -0.44
PRPF8-203ENST00000571958 GDF11O95390 407 aa12.32□□□□□ -0.44
PRPF8-203ENST00000571958 GNAI2P04899 355 aa12.32□□□□□ -0.44
PRPF8-203ENST00000571958 ASNSP08243 561 aa12.32□□□□□ -0.44
PRPF8-203ENST00000571958 UQCRFS1P1P0C7P4 283 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms