RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 CCL15Q16663 113 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 SHROOM1Q2M3G4 852 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 SCYL3Q8IZE3 742 aa12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 ZNF296Q8WUU4 475 aaPredicted RBP12.42□□□□□ -0.42
GTF3C1-213ENST00000571886 ATAD5Q96QE3 1844 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 SALL3Q9BXA9 1300 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 COL2A1P02458 1487 aaPredicted RBP12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 BTBD19C9JJ37 291 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 PTPRAP18433 802 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 USP5P45974 858 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 CAP1Q01518 475 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 MOGSQ13724 837 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 DOCK1Q14185 1865 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 LCORLQ8N3X6 602 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 PI4K2BQ8TCG2 481 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 CFHR5Q9BXR6 569 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 ARMT1Q9H993 441 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 PI4KBQ9UBF8 816 aa12.41□□□□□ -0.42
GTF3C1-213ENST00000571886 SMIM22K7EJ46 135 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 PRKAB2O43741 272 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 CTNND1O60716 968 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 CRHR2Q13324 411 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 METTL16Q86W50 562 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 SDR42E1Q8WUS8 393 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 MCOLN1Q9GZU1 580 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 DHX36Q9H2U1 1008 aaKnown RBP12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 KCNH4Q9UQ05 1017 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 ZHX2Q9Y6X8 837 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 PTPRFP10586 1907 aa12.4□□□□□ -0.42
GTF3C1-213ENST00000571886 BAZ2AQ9UIF9 1905 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 CAPN15O75808 1086 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 ALDH1A1P00352 501 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 CETPP11597 493 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 CAP2P40123 477 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 PLCD1P51178 756 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 SNAPC2Q13487 334 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 DGKZQ13574 1117 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 FOXP4Q8IVH2 680 aaPredicted RBP12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 GCC1Q96CN9 775 aa12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 PUS7LQ9H0K6 701 aaKnown RBP12.39□□□□□ -0.43
GTF3C1-213ENST00000571886 NAV1Q8NEY1 1877 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 DDX60LQ5H9U9 1706 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 MBD4O95243 580 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 CYP2D6P10635 497 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 UBE3CQ15386 1083 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 OTUD7BQ6GQQ9 843 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 B4GALNT3Q6L9W6 998 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 GPAT2Q6NUI2 795 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 TMED8Q6PL24 325 aaPredicted RBP12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 SMC5Q8IY18 1101 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 KBTBD3Q8NAB2 608 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 LNPKQ9C0E8 428 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 PICK1Q9NRD5 415 aa12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 HERC5Q9UII4 1024 aaKnown RBP12.38□□□□□ -0.43
GTF3C1-213ENST00000571886 TTC41PQ6P2S7 1318 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 CXCL11O14625 94 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 FKTNO75072 461 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 GDF11O95390 407 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 MX1P20591 662 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 AAMPQ13685 434 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 TAF1CQ15572 869 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 NOM1Q5C9Z4 860 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 CRACR2BQ8N4Y2 399 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 OSBP2Q969R2 916 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 ABHD8Q96I13 439 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 GPATCH3Q96I76 525 aa12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 CRNKL1Q9BZJ0 848 aaKnown RBP12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 RWDD1Q9H446 243 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 DCP1AQ9NPI6 582 aaPredicted RBP12.37□□□□□ -0.43
GTF3C1-213ENST00000571886 CYP2D7A0A087X1C5 515 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 A0A0G2JLL6 359 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 TRIM75PA6NK02 468 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 GLRX3O76003 335 aaKnown RBP12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 HLA-DOAP06340 250 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 PDE1AP54750 535 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 SPP2Q13103 211 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 PRRT2Q7Z6L0 340 aaPredicted RBP12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 CERS3Q8IU89 383 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 MCM9Q9NXL9 1143 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 ZSWIM8A7E2V4 1837 aa12.36□□□□□ -0.43
GTF3C1-213ENST00000571886 M0R2C6 588 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 PDHXO00330 501 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 RNF113AO15541 343 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 POLR3DP05423 398 aaPredicted RBP12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 SHMT1P34896 483 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 GABPAQ06546 454 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 TATDN1Q6P1N9 297 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 GADL1Q6ZQY3 521 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 CTU1Q7Z7A3 348 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 ANKRD23Q86SG2 305 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 TTC6Q86TZ1 520 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 CD99L2Q8TCZ2 262 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 DYNLL2Q96FJ2 89 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 STRBPQ96SI9 672 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 SEC62Q99442 399 aaKnown RBP12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 ZFYVE28Q9HCC9 887 aa12.35□□□□□ -0.43
GTF3C1-213ENST00000571886 STAP2Q9UGK3 403 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms