RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 CCDC158Q5M9N0 1113 aa19.1■□□□□ 0.65
TSR1-202ENST00000571806 TBC1D9Q6ZT07 1266 aa19.1■□□□□ 0.65
TSR1-202ENST00000571806 ZNF280CQ8ND82 737 aa19.1■□□□□ 0.65
TSR1-202ENST00000571806 COA7Q96BR5 231 aa19.1■□□□□ 0.65
TSR1-202ENST00000571806 SHISA4Q96DD7 197 aa19.1■□□□□ 0.65
TSR1-202ENST00000571806 AS3MTQ9HBK9 375 aa19.1■□□□□ 0.65
TSR1-202ENST00000571806 PI4KBQ9UBF8 816 aa19.1■□□□□ 0.65
TSR1-202ENST00000571806 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.1■□□□□ 0.65
TSR1-202ENST00000571806 BCAR3O75815 825 aa19.09■□□□□ 0.65
TSR1-202ENST00000571806 GCLCP48506 637 aaPredicted RBP19.09■□□□□ 0.65
TSR1-202ENST00000571806 FLT3LGP49771 235 aa19.09■□□□□ 0.65
TSR1-202ENST00000571806 FAM110CQ1W6H9 321 aa19.09■□□□□ 0.65
TSR1-202ENST00000571806 ZKSCAN2Q63HK3 967 aa19.09■□□□□ 0.65
TSR1-202ENST00000571806 TEX11Q8IYF3 940 aa19.09■□□□□ 0.65
TSR1-202ENST00000571806 DPF3Q92784 378 aa19.09■□□□□ 0.65
TSR1-202ENST00000571806 GABRQQ9UN88 632 aa19.09■□□□□ 0.65
TSR1-202ENST00000571806 USP17L5A8MUK1 530 aa19.08■□□□□ 0.64
TSR1-202ENST00000571806 H0YGN5 161 aa19.08■□□□□ 0.64
TSR1-202ENST00000571806 SPP2Q13103 211 aa19.08■□□□□ 0.64
TSR1-202ENST00000571806 TTC39AQ5SRH9 613 aa19.08■□□□□ 0.64
TSR1-202ENST00000571806 NAA16Q6N069 864 aaPredicted RBP19.08■□□□□ 0.64
TSR1-202ENST00000571806 PI16Q6UXB8 463 aa19.08■□□□□ 0.64
TSR1-202ENST00000571806 U2AF1L4Q8WU68 220 aaKnown RBP19.08■□□□□ 0.64
TSR1-202ENST00000571806 CLUAP1Q96AJ1 413 aa19.08■□□□□ 0.64
TSR1-202ENST00000571806 ZNF512BQ96KM6 892 aaPredicted RBP19.08■□□□□ 0.64
TSR1-202ENST00000571806 COLQQ9Y215 455 aaPredicted RBP19.08■□□□□ 0.64
TSR1-202ENST00000571806 SGPL1O95470 568 aa19.07■□□□□ 0.64
TSR1-202ENST00000571806 POLA2Q14181 598 aa19.07■□□□□ 0.64
TSR1-202ENST00000571806 UBE2Q1Q7Z7E8 422 aa19.07■□□□□ 0.64
TSR1-202ENST00000571806 ANKRD13CQ8N6S4 541 aa19.07■□□□□ 0.64
TSR1-202ENST00000571806 SSH3Q8TE77 659 aa19.07■□□□□ 0.64
TSR1-202ENST00000571806 GINM1Q9NU53 330 aa19.07■□□□□ 0.64
TSR1-202ENST00000571806 SLURP2P0DP57 97 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 FXR1P51114 621 aaKnown RBP eCLIP19.06■□□□□ 0.64
TSR1-202ENST00000571806 PPP4CP60510 307 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 ATP8B2P98198 1209 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 OS9Q13438 667 aaPredicted RBP19.06■□□□□ 0.64
TSR1-202ENST00000571806 TNNI3KQ59H18 835 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 SH3D19Q5HYK7 790 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 TREML2Q5T2D2 321 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 FOXP4Q8IVH2 680 aaPredicted RBP19.06■□□□□ 0.64
TSR1-202ENST00000571806 NR2E3Q9Y5X4 410 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 FPGT-TNNI3KV9GXZ4 949 aa19.06■□□□□ 0.64
TSR1-202ENST00000571806 ASNSP08243 561 aa19.05■□□□□ 0.64
TSR1-202ENST00000571806 CERS3Q8IU89 383 aa19.05■□□□□ 0.64
TSR1-202ENST00000571806 TMEM57Q8N5G2 664 aa19.05■□□□□ 0.64
TSR1-202ENST00000571806 SH3RF3Q8TEJ3 882 aaPredicted RBP19.05■□□□□ 0.64
TSR1-202ENST00000571806 WDR18Q9BV38 432 aa19.05■□□□□ 0.64
TSR1-202ENST00000571806 UNC93B1Q9H1C4 597 aa19.05■□□□□ 0.64
TSR1-202ENST00000571806 LOC285556D6RIA3 1793 aa19.04■□□□□ 0.64
TSR1-202ENST00000571806 FAM196BA6NMK8 535 aa19.04■□□□□ 0.64
TSR1-202ENST00000571806 INHAP05111 366 aa19.04■□□□□ 0.64
TSR1-202ENST00000571806 HMGCS2P54868 508 aa19.04■□□□□ 0.64
TSR1-202ENST00000571806 TMED8Q6PL24 325 aaPredicted RBP19.04■□□□□ 0.64
TSR1-202ENST00000571806 METTL16Q86W50 562 aaKnown RBP19.04■□□□□ 0.64
TSR1-202ENST00000571806 TRIM34Q9BYJ4 488 aa19.04■□□□□ 0.64
TSR1-202ENST00000571806 AATFQ9NY61 560 aaKnown RBP eCLIP19.04■□□□□ 0.64
TSR1-202ENST00000571806 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.04■□□□□ 0.64
TSR1-202ENST00000571806 ATAD5Q96QE3 1844 aa19.04■□□□□ 0.64
TSR1-202ENST00000571806 MAST2Q6P0Q8 1798 aa19.04■□□□□ 0.64
TSR1-202ENST00000571806 C19orf81C9J6K1 198 aa19.03■□□□□ 0.64
TSR1-202ENST00000571806 SURF6O75683 361 aaKnown RBP19.03■□□□□ 0.64
TSR1-202ENST00000571806 FARP2O94887 1054 aaPredicted RBP19.03■□□□□ 0.64
TSR1-202ENST00000571806 CCDC84Q86UT8 332 aaPredicted RBP19.03■□□□□ 0.64
TSR1-202ENST00000571806 FTSJ3Q8IY81 847 aaKnown RBP19.03■□□□□ 0.64
TSR1-202ENST00000571806 TMOD4Q9NZQ9 345 aa19.03■□□□□ 0.64
TSR1-202ENST00000571806 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
TSR1-202ENST00000571806 NOP58Q9Y2X3 529 aaKnown RBP19.03■□□□□ 0.64
TSR1-202ENST00000571806 TFRCP02786 760 aaKnown RBP19.02■□□□□ 0.64
TSR1-202ENST00000571806 CYP2E1P05181 493 aaPredicted RBP19.02■□□□□ 0.64
TSR1-202ENST00000571806 ELNP15502 786 aa19.02■□□□□ 0.64
TSR1-202ENST00000571806 BACE1P56817 501 aa19.02■□□□□ 0.64
TSR1-202ENST00000571806 CRACR2BQ8N4Y2 399 aaPredicted RBP19.02■□□□□ 0.64
TSR1-202ENST00000571806 TGFBRAP1Q8WUH2 860 aa19.02■□□□□ 0.64
TSR1-202ENST00000571806 DBNDD2Q9BQY9 259 aa19.02■□□□□ 0.64
TSR1-202ENST00000571806 ASCC2Q9H1I8 757 aaPredicted RBP19.02■□□□□ 0.64
TSR1-202ENST00000571806 PAK6Q9NQU5 681 aaPredicted RBP19.02■□□□□ 0.64
TSR1-202ENST00000571806 SNRKQ9NRH2 765 aa19.02■□□□□ 0.64
TSR1-202ENST00000571806 HLA-DOAP06340 250 aa19.01■□□□□ 0.63
TSR1-202ENST00000571806 HOXA7P31268 230 aaPredicted RBP19.01■□□□□ 0.63
TSR1-202ENST00000571806 MORF4L1Q9UBU8 362 aa19.01■□□□□ 0.63
TSR1-202ENST00000571806 FLT1P17948 1338 aa19■□□□□ 0.63
TSR1-202ENST00000571806 HMGCRP04035 888 aa19■□□□□ 0.63
TSR1-202ENST00000571806 IRX3P78415 501 aaPredicted RBP19■□□□□ 0.63
TSR1-202ENST00000571806 RRP1BQ14684 758 aaKnown RBP19■□□□□ 0.63
TSR1-202ENST00000571806 CHRDL2Q6WN34 429 aa19■□□□□ 0.63
TSR1-202ENST00000571806 DEFB118Q96PH6 123 aa19■□□□□ 0.63
TSR1-202ENST00000571806 CRISPLD2Q9H0B8 497 aa19■□□□□ 0.63
TSR1-202ENST00000571806 TAOK2Q9UL54 1235 aa19■□□□□ 0.63
TSR1-202ENST00000571806 USP17L10C9JJH3 530 aa18.99■□□□□ 0.63
TSR1-202ENST00000571806 MAPKAPK5Q8IW41 473 aa18.99■□□□□ 0.63
TSR1-202ENST00000571806 ANKLE1Q8NAG6 615 aa18.99■□□□□ 0.63
TSR1-202ENST00000571806 GTF3C2Q8WUA4 911 aaPredicted RBP18.99■□□□□ 0.63
TSR1-202ENST00000571806 FOCADQ5VW36 1801 aa18.99■□□□□ 0.63
TSR1-202ENST00000571806 ZBTB7BO15156 539 aaPredicted RBP18.98■□□□□ 0.63
TSR1-202ENST00000571806 EVI5O60447 810 aa18.98■□□□□ 0.63
TSR1-202ENST00000571806 ZAP70P43403 619 aa18.98■□□□□ 0.63
TSR1-202ENST00000571806 MTMR2Q13614 643 aa18.98■□□□□ 0.63
TSR1-202ENST00000571806 ADGRA1Q86SQ6 560 aa18.98■□□□□ 0.63
TSR1-202ENST00000571806 ITPRIPQ8IWB1 547 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms