RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 C1orf115Q9H7X2 142 aa21.59■■□□□ 1.05
CIITA-206ENST00000571190 RLBP1P12271 317 aa21.58■■□□□ 1.05
CIITA-206ENST00000571190 FLT3LGP49771 235 aa21.58■■□□□ 1.05
CIITA-206ENST00000571190 JAG1P78504 1218 aa21.58■■□□□ 1.05
CIITA-206ENST00000571190 SLAIN1Q8ND83 568 aa21.58■■□□□ 1.05
CIITA-206ENST00000571190 SMCR8Q8TEV9 937 aaPredicted RBP21.58■■□□□ 1.05
CIITA-206ENST00000571190 H0YGN5 161 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 ZBTB7BO15156 539 aaPredicted RBP21.57■■□□□ 1.04
CIITA-206ENST00000571190 PPP4CP60510 307 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 TTC39AQ5SRH9 613 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 ANKRD13CQ8N6S4 541 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 PROCA1Q8NCQ7 364 aaPredicted RBP21.57■■□□□ 1.04
CIITA-206ENST00000571190 ZNF280CQ8ND82 737 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 RNF208Q9H0X6 261 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 UNC93B1Q9H1C4 597 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 AATFQ9NY61 560 aaKnown RBP eCLIP21.57■■□□□ 1.04
CIITA-206ENST00000571190 BIN2Q9UBW5 565 aaPredicted RBP21.57■■□□□ 1.04
CIITA-206ENST00000571190 COLQQ9Y215 455 aaPredicted RBP21.57■■□□□ 1.04
CIITA-206ENST00000571190 NOP58Q9Y2X3 529 aaKnown RBP21.57■■□□□ 1.04
CIITA-206ENST00000571190 MYH2Q9UKX2 1941 aa21.57■■□□□ 1.04
CIITA-206ENST00000571190 ADCY3O60266 1144 aa21.56■■□□□ 1.04
CIITA-206ENST00000571190 SURF6O75683 361 aaKnown RBP21.56■■□□□ 1.04
CIITA-206ENST00000571190 ELNP15502 786 aa21.56■■□□□ 1.04
CIITA-206ENST00000571190 ZAP70P43403 619 aa21.56■■□□□ 1.04
CIITA-206ENST00000571190 NAA16Q6N069 864 aaPredicted RBP21.56■■□□□ 1.04
CIITA-206ENST00000571190 NKX2-3Q8TAU0 364 aa21.56■■□□□ 1.04
CIITA-206ENST00000571190 ZNF512BQ96KM6 892 aaPredicted RBP21.56■■□□□ 1.04
CIITA-206ENST00000571190 DNAJC18Q9H819 358 aa21.56■■□□□ 1.04
CIITA-206ENST00000571190 PIH1D3Q9NQM4 214 aaKnown RBP21.56■■□□□ 1.04
CIITA-206ENST00000571190 HERC5Q9UII4 1024 aaKnown RBP21.56■■□□□ 1.04
CIITA-206ENST00000571190 DOCK2Q92608 1830 aa21.55■■□□□ 1.04
CIITA-206ENST00000571190 TNPO2O14787 897 aaKnown RBP21.55■■□□□ 1.04
CIITA-206ENST00000571190 HMGCS2P54868 508 aa21.55■■□□□ 1.04
CIITA-206ENST00000571190 UBXN2AP68543 259 aa21.55■■□□□ 1.04
CIITA-206ENST00000571190 IRF5Q13568 498 aa21.55■■□□□ 1.04
CIITA-206ENST00000571190 SH3D19Q5HYK7 790 aa21.55■■□□□ 1.04
CIITA-206ENST00000571190 CCDC158Q5M9N0 1113 aa21.55■■□□□ 1.04
CIITA-206ENST00000571190 METTL16Q86W50 562 aaKnown RBP21.55■■□□□ 1.04
CIITA-206ENST00000571190 TLR7Q9NYK1 1049 aaKnown RBP21.55■■□□□ 1.04
CIITA-206ENST00000571190 PI4KBQ9UBF8 816 aa21.55■■□□□ 1.04
CIITA-206ENST00000571190 DBNLQ9UJU6 430 aaKnown RBP21.55■■□□□ 1.04
CIITA-206ENST00000571190 USP17L5A8MUK1 530 aa21.54■■□□□ 1.04
CIITA-206ENST00000571190 FXR1P51114 621 aaKnown RBP eCLIP21.54■■□□□ 1.04
CIITA-206ENST00000571190 OS9Q13438 667 aaPredicted RBP21.54■■□□□ 1.04
CIITA-206ENST00000571190 FAM110CQ1W6H9 321 aa21.54■■□□□ 1.04
CIITA-206ENST00000571190 MAPKAPK5Q8IW41 473 aa21.54■■□□□ 1.04
CIITA-206ENST00000571190 PXYLP1Q8TE99 480 aa21.54■■□□□ 1.04
CIITA-206ENST00000571190 U2AF1L4Q8WU68 220 aaKnown RBP21.54■■□□□ 1.04
CIITA-206ENST00000571190 TGFBRAP1Q8WUH2 860 aa21.54■■□□□ 1.04
CIITA-206ENST00000571190 DHX36Q9H2U1 1008 aaKnown RBP21.54■■□□□ 1.04
CIITA-206ENST00000571190 BAG3O95817 575 aa21.53■■□□□ 1.04
CIITA-206ENST00000571190 INHAP05111 366 aa21.53■■□□□ 1.04
CIITA-206ENST00000571190 SHROOM1Q2M3G4 852 aaPredicted RBP21.53■■□□□ 1.04
CIITA-206ENST00000571190 EAF2Q96CJ1 260 aaPredicted RBP21.53■■□□□ 1.04
CIITA-206ENST00000571190 TBC1D2Q9BYX2 928 aa21.53■■□□□ 1.04
CIITA-206ENST00000571190 PNMA3Q9UL41 463 aa21.53■■□□□ 1.04
CIITA-206ENST00000571190 FLT1P17948 1338 aa21.53■■□□□ 1.04
CIITA-206ENST00000571190 SGPL1O95470 568 aa21.52■■□□□ 1.04
CIITA-206ENST00000571190 PLCG2P16885 1265 aa21.52■■□□□ 1.04
CIITA-206ENST00000571190 HNRNPUQ00839 825 aaKnown RBP eCLIP21.52■■□□□ 1.04
CIITA-206ENST00000571190 NOL10Q9BSC4 688 aaKnown RBP21.52■■□□□ 1.04
CIITA-206ENST00000571190 WDR18Q9BV38 432 aa21.52■■□□□ 1.04
CIITA-206ENST00000571190 CCDC8Q9H0W5 538 aaPredicted RBP21.52■■□□□ 1.04
CIITA-206ENST00000571190 ASCC2Q9H1I8 757 aaPredicted RBP21.52■■□□□ 1.04
CIITA-206ENST00000571190 DYNLL1P63167 89 aaKnown RBP21.51■■□□□ 1.03
CIITA-206ENST00000571190 ITPRIPQ8IWB1 547 aa21.51■■□□□ 1.03
CIITA-206ENST00000571190 PALD1Q9ULE6 856 aa21.51■■□□□ 1.03
CIITA-206ENST00000571190 DOCK1Q14185 1865 aa21.5■■□□□ 1.03
CIITA-206ENST00000571190 GCLCP48506 637 aaPredicted RBP21.5■■□□□ 1.03
CIITA-206ENST00000571190 FOXP4Q8IVH2 680 aaPredicted RBP21.5■■□□□ 1.03
CIITA-206ENST00000571190 FTSJ3Q8IY81 847 aaKnown RBP21.5■■□□□ 1.03
CIITA-206ENST00000571190 MIER1Q8N108 512 aa21.5■■□□□ 1.03
CIITA-206ENST00000571190 DPF3Q92784 378 aa21.5■■□□□ 1.03
CIITA-206ENST00000571190 COA7Q96BR5 231 aa21.5■■□□□ 1.03
CIITA-206ENST00000571190 GJD2Q9UKL4 321 aa21.5■■□□□ 1.03
CIITA-206ENST00000571190 AK9Q5TCS8 1911 aa21.5■■□□□ 1.03
CIITA-206ENST00000571190 IGSF3O75054 1194 aa21.49■■□□□ 1.03
CIITA-206ENST00000571190 BACE1P56817 501 aa21.49■■□□□ 1.03
CIITA-206ENST00000571190 MTMR2Q13614 643 aa21.49■■□□□ 1.03
CIITA-206ENST00000571190 CEP85Q6P2H3 762 aa21.49■■□□□ 1.03
CIITA-206ENST00000571190 AS3MTQ9HBK9 375 aa21.49■■□□□ 1.03
CIITA-206ENST00000571190 PAK6Q9NQU5 681 aaPredicted RBP21.49■■□□□ 1.03
CIITA-206ENST00000571190 PHIPQ8WWQ0 1821 aa21.49■■□□□ 1.03
CIITA-206ENST00000571190 PEX10O60683 326 aa21.48■■□□□ 1.03
CIITA-206ENST00000571190 FARP2O94887 1054 aaPredicted RBP21.48■■□□□ 1.03
CIITA-206ENST00000571190 ASNSP08243 561 aa21.48■■□□□ 1.03
CIITA-206ENST00000571190 CYP7A1P22680 504 aa21.48■■□□□ 1.03
CIITA-206ENST00000571190 PABPC4Q13310 644 aaKnown RBP eCLIP21.48■■□□□ 1.03
CIITA-206ENST00000571190 DEFB118Q96PH6 123 aa21.48■■□□□ 1.03
CIITA-206ENST00000571190 MORF4L1Q9UBU8 362 aa21.48■■□□□ 1.03
CIITA-206ENST00000571190 SAP30BPQ9UHR5 308 aaKnown RBP21.48■■□□□ 1.03
CIITA-206ENST00000571190 NDUFB9Q9Y6M9 179 aa21.48■■□□□ 1.03
CIITA-206ENST00000571190 GDF11O95390 407 aa21.47■■□□□ 1.03
CIITA-206ENST00000571190 HOXA7P31268 230 aaPredicted RBP21.47■■□□□ 1.03
CIITA-206ENST00000571190 P2RX7Q99572 595 aaKnown RBP21.47■■□□□ 1.03
CIITA-206ENST00000571190 CRISPLD2Q9H0B8 497 aa21.47■■□□□ 1.03
CIITA-206ENST00000571190 ANTXR1Q9H6X2 564 aa21.47■■□□□ 1.03
CIITA-206ENST00000571190 TAOK2Q9UL54 1235 aa21.47■■□□□ 1.03
CIITA-206ENST00000571190 POTEEQ6S8J3 1075 aa21.46■■□□□ 1.03
CIITA-206ENST00000571190 CHRDL2Q6WN34 429 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms