RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 IFIT2P09913 472 aaKnown RBP16.25■□□□□ 0.19
CCDC40-205ENST00000571028 TCP10Q12799 353 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 ANKRD45Q5TZF3 282 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 APOBEC3HQ6NTF7 200 aaKnown RBP16.25■□□□□ 0.19
CCDC40-205ENST00000571028 FASTKD5Q7L8L6 764 aaKnown RBP16.25■□□□□ 0.19
CCDC40-205ENST00000571028 C7orf61Q8IZ16 206 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 PXYLP1Q8TE99 480 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 SMCR8Q8TEV9 937 aaPredicted RBP16.25■□□□□ 0.19
CCDC40-205ENST00000571028 PAWRQ96IZ0 340 aaKnown RBP16.25■□□□□ 0.19
CCDC40-205ENST00000571028 MRIQ9BWK5 157 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 GPR108Q9NPR9 543 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 GNL3LQ9NVN8 582 aaKnown RBP16.25■□□□□ 0.19
CCDC40-205ENST00000571028 SUGT1Q9Y2Z0 365 aa16.25■□□□□ 0.19
CCDC40-205ENST00000571028 CXCL11O14625 94 aa16.24■□□□□ 0.19
CCDC40-205ENST00000571028 TTC39AQ5SRH9 613 aa16.24■□□□□ 0.19
CCDC40-205ENST00000571028 FAM151AQ8WW52 585 aa16.24■□□□□ 0.19
CCDC40-205ENST00000571028 PICK1Q9NRD5 415 aa16.24■□□□□ 0.19
CCDC40-205ENST00000571028 STXBP5LQ9Y2K9 1186 aa16.24■□□□□ 0.19
CCDC40-205ENST00000571028 BMP8BP34820 402 aa16.23■□□□□ 0.19
CCDC40-205ENST00000571028 CCDC158Q5M9N0 1113 aa16.23■□□□□ 0.19
CCDC40-205ENST00000571028 NOL9Q5SY16 702 aaKnown RBP16.23■□□□□ 0.19
CCDC40-205ENST00000571028 HHIPL2Q6UWX4 724 aa16.23■□□□□ 0.19
CCDC40-205ENST00000571028 GADL1Q6ZQY3 521 aa16.23■□□□□ 0.19
CCDC40-205ENST00000571028 COA7Q96BR5 231 aa16.23■□□□□ 0.19
CCDC40-205ENST00000571028 DBNLQ9UJU6 430 aaKnown RBP16.23■□□□□ 0.19
CCDC40-205ENST00000571028 ZMYND8Q9ULU4 1186 aaPredicted RBP16.23■□□□□ 0.19
CCDC40-205ENST00000571028 LAMA3Q16787 3333 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 CUL9Q8IWT3 2517 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 IRF5Q13568 498 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 MOGSQ13724 837 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 Q7L0L9 218 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 GDF15Q99988 308 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 PAK6Q9NQU5 681 aaPredicted RBP16.22■□□□□ 0.19
CCDC40-205ENST00000571028 SNRKQ9NRH2 765 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 ZNF112Q9UJU3 913 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 ZHX2Q9Y6X8 837 aa16.22■□□□□ 0.19
CCDC40-205ENST00000571028 CRISPLD2Q9H0B8 497 aa16.21■□□□□ 0.19
CCDC40-205ENST00000571028 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
CCDC40-205ENST00000571028 RASGRF1Q13972 1273 aa16.2■□□□□ 0.18
CCDC40-205ENST00000571028 LRIT3Q3SXY7 679 aa16.2■□□□□ 0.18
CCDC40-205ENST00000571028 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
CCDC40-205ENST00000571028 TDHQ8IZJ6 230 aa16.2■□□□□ 0.18
CCDC40-205ENST00000571028 ANKLE1Q8NAG6 615 aa16.2■□□□□ 0.18
CCDC40-205ENST00000571028 DIS3LQ8TF46 1054 aaKnown RBP16.2■□□□□ 0.18
CCDC40-205ENST00000571028 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.2■□□□□ 0.18
CCDC40-205ENST00000571028 DENND2AQ9ULE3 1009 aa16.2■□□□□ 0.18
CCDC40-205ENST00000571028 A0A0G2JLL6 359 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-205ENST00000571028 SYN1P17600 705 aa16.19■□□□□ 0.18
CCDC40-205ENST00000571028 PRRT2Q7Z6L0 340 aaPredicted RBP16.19■□□□□ 0.18
CCDC40-205ENST00000571028 SCYL3Q8IZE3 742 aa16.19■□□□□ 0.18
CCDC40-205ENST00000571028 WDR66Q8TBY9 1149 aa16.19■□□□□ 0.18
CCDC40-205ENST00000571028 UBE2OQ9C0C9 1292 aaKnown RBP16.19■□□□□ 0.18
CCDC40-205ENST00000571028 NBPF3Q9H094 633 aa16.19■□□□□ 0.18
CCDC40-205ENST00000571028 HMG20BQ9P0W2 317 aa16.19■□□□□ 0.18
CCDC40-205ENST00000571028 SLC45A1Q9Y2W3 748 aa16.19■□□□□ 0.18
CCDC40-205ENST00000571028 MCAMP43121 646 aa16.18■□□□□ 0.18
CCDC40-205ENST00000571028 MAGEA10P43363 369 aaPredicted RBP16.18■□□□□ 0.18
CCDC40-205ENST00000571028 CDC42EP5Q6NZY7 148 aa16.18■□□□□ 0.18
CCDC40-205ENST00000571028 SPATA5Q8NB90 893 aa16.18■□□□□ 0.18
CCDC40-205ENST00000571028 LNPKQ9C0E8 428 aa16.18■□□□□ 0.18
CCDC40-205ENST00000571028 MTMR10Q9NXD2 777 aa16.18■□□□□ 0.18
CCDC40-205ENST00000571028 ABCF2Q9UG63 623 aa16.18■□□□□ 0.18
CCDC40-205ENST00000571028 NDUFB9Q9Y6M9 179 aa16.18■□□□□ 0.18
CCDC40-205ENST00000571028 SEMA3EO15041 775 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 HMGCRP04035 888 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 ARID4AP29374 1257 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-205ENST00000571028 ZAP70P43403 619 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 NFIAQ12857 509 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 TSHZ3Q63HK5 1081 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 TBC1D9Q6ZT07 1266 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 ZSCAN29Q8IWY8 852 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-205ENST00000571028 SMC5Q8IY18 1101 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 ANKRD13CQ8N6S4 541 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-205ENST00000571028 COL25A1Q9BXS0 654 aaPredicted RBP16.17■□□□□ 0.18
CCDC40-205ENST00000571028 C11orf49Q9H6J7 331 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 USP40Q9NVE5 1235 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 PNMA3Q9UL41 463 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 DAGLAQ9Y4D2 1042 aa16.17■□□□□ 0.18
CCDC40-205ENST00000571028 TRIM75PA6NK02 468 aa16.16■□□□□ 0.18
CCDC40-205ENST00000571028 PTPRAP18433 802 aa16.16■□□□□ 0.18
CCDC40-205ENST00000571028 DIXDC1Q155Q3 683 aa16.16■□□□□ 0.18
CCDC40-205ENST00000571028 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCDC40-205ENST00000571028 CCDC136Q96JN2 1154 aa16.16■□□□□ 0.18
CCDC40-205ENST00000571028 DNAJC2Q99543 621 aaKnown RBP16.16■□□□□ 0.18
CCDC40-205ENST00000571028 BOLA2Q9H3K6 86 aa16.16■□□□□ 0.18
CCDC40-205ENST00000571028 HMX1Q9NP08 348 aaPredicted RBP16.16■□□□□ 0.18
CCDC40-205ENST00000571028 FAM198AQ9UFP1 575 aa16.15■□□□□ 0.18
CCDC40-205ENST00000571028 AFG3L2Q9Y4W6 797 aa16.15■□□□□ 0.18
CCDC40-205ENST00000571028 RPTORQ8N122 1335 aa16.15■□□□□ 0.18
CCDC40-205ENST00000571028 LDHBP07195 334 aaKnown RBP16.14■□□□□ 0.17
CCDC40-205ENST00000571028 PRDX5P30044 214 aa16.14■□□□□ 0.17
CCDC40-205ENST00000571028 FAM110CQ1W6H9 321 aa16.14■□□□□ 0.17
CCDC40-205ENST00000571028 CHD1LQ86WJ1 897 aa16.14■□□□□ 0.17
CCDC40-205ENST00000571028 GPATCH3Q96I76 525 aa16.14■□□□□ 0.17
CCDC40-205ENST00000571028 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
CCDC40-205ENST00000571028 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
CCDC40-205ENST00000571028 AGTPBP1Q9UPW5 1226 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms