RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 NFE2Q16621 373 aaPredicted RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 PROSER3Q2NL68 480 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 C1orf141Q5JVX7 400 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 TBC1D9Q6ZT07 1266 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 TOM1L2Q6ZVM7 507 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 CENPQQ7L2Z9 268 aaPredicted RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 USP48Q86UV5 1035 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 RELL1Q8IUW5 271 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 GLYCTKQ8IVS8 523 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 SUGP1Q8IWZ8 645 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 RAVER1Q8IY67 606 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 PRR7Q8TB68 274 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 RPGRQ92834 1020 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 WNT2BQ93097 391 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 ITFG2Q969R8 447 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 TSPY26PQ9H489 355 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 C12orf49Q9H741 205 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 SUDS3Q9H7L9 328 aaPredicted RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 PHAXQ9H814 394 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 ENAMQ9NRM1 1142 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 ZBTB40Q9NUA8 1239 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 TMEM51Q9NW97 253 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 GTF2A1LQ9UNN4 478 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 VPS9D1Q9Y2B5 631 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 RREB1Q92766 1687 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 ATP10DQ9P241 1426 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 LY75O60449 1722 aa4.18□□□□□ -1.74
SMG6-208ENST00000570874 DDX60Q8IY21 1712 aaKnown RBP4.18□□□□□ -1.74
SMG6-208ENST00000570874 LRP6O75581 1613 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 NUTM2BA6NNL0 878 aaPredicted RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 BTBD11A6QL63 1104 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 NUTM2EB1AL46 878 aaPredicted RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 PRRT4C9JH25 899 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 IPO5O00410 1097 aaKnown RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 ZBTB7BO15156 539 aaPredicted RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 IPO8O15397 1037 aaKnown RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 ORC4O43929 436 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 TCEA3O75764 348 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 ABL1P00519 1130 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 FGRP09769 529 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 PIP4K2AP48426 406 aaPredicted RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 SEC13P55735 322 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 CBLBQ13191 982 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 SERINC3Q13530 473 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 MORC3Q14149 939 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 TUSC1Q2TAM9 212 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 SLC4A8Q2Y0W8 1093 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 ZC3H12AQ5D1E8 599 aaKnown RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 PPP1R15BQ5SWA1 713 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 NUTM2AQ8IVF1 878 aaPredicted RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 SIRT2Q8IXJ6 389 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 EFCAB3Q8N7B9 438 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 PPHLN1Q8NEY8 458 aaKnown RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 C1orf216Q8TAB5 229 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 RAPGEF4Q8WZA2 1011 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 CCDC34Q96HJ3 373 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 PAWRQ96IZ0 340 aaKnown RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 GJD4Q96KN9 370 aaPredicted RBP4.17□□□□□ -1.74
SMG6-208ENST00000570874 IWS1Q96ST2 819 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 MEIS3Q99687 375 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.17□□□□□ -1.74
SMG6-208ENST00000570874 DNAJC25Q9H1X3 360 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 BTG4Q9NY30 223 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 LIMD1Q9UGP4 676 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 DDX19BQ9UMR2 479 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 DISP2A7MBM2 1401 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 C4AP0C0L4 1744 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 C4BP0C0L5 1744 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 PXDNLA1KZ92 1463 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 CHD4Q14839 1912 aa4.17□□□□□ -1.74
SMG6-208ENST00000570874 THSD7AQ9UPZ6 1657 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 ADCY9O60503 1353 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 HEG1Q9ULI3 1381 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 FAM170AA1A519 330 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 FAM196BA6NMK8 535 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 GOLGA8CPA6NN73 597 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 PPP1R3GB7ZBB8 358 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 SORBS3O60504 671 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 ICMTO60725 284 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 ADAMTS2O95450 1211 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 P4HBP07237 508 aaKnown RBP4.16□□□□□ -1.74
SMG6-208ENST00000570874 NEFHP12036 1026 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 NDUFV2P19404 249 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 PSMA3P25788 255 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 TSPAN7P41732 249 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 ZNF132P52740 706 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 CHMP4BP1P59074 171 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 TEFQ10587 303 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 C8orf34Q49A92 452 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 AMOTQ4VCS5 1084 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 BRDTQ58F21 947 aaPredicted RBP4.16□□□□□ -1.74
SMG6-208ENST00000570874 CCDC158Q5M9N0 1113 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 HYIQ5T013 277 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 INTS3Q68E01 1043 aaKnown RBP4.16□□□□□ -1.74
SMG6-208ENST00000570874 SLC4A10Q6U841 1118 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 CPXCR1Q8N123 301 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 ARL6IP6Q8N6S5 226 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 NFATC2IPQ8NCF5 419 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 ARHGAP45Q92619 1136 aa4.16□□□□□ -1.74
SMG6-208ENST00000570874 APPBP2Q92624 585 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms