RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 DNAJC18Q9H819 358 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 ZCCHC17Q9NP64 241 aaKnown RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 SAP30BPQ9UHR5 308 aaKnown RBP6.59□□□□□ -1.35
CHD3-212ENST00000570758 AFG3L2Q9Y4W6 797 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 TRIM17Q9Y577 477 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 PCDHB15Q9Y5E8 787 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 ZHX2Q9Y6X8 837 aa6.59□□□□□ -1.35
CHD3-212ENST00000570758 DOCK1Q14185 1865 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 CDK5RAP2Q96SN8 1893 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 ADGRA2Q96PE1 1338 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 PHIPQ8WWQ0 1821 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 A0A0G2JLL6 359 aaPredicted RBP6.58□□□□□ -1.36
CHD3-212ENST00000570758 TCRBV5S4A2TA0A5A2 114 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 PDHXO00330 501 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 TLR2O60603 784 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 IGSF3O75054 1194 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 PDE6AP16499 860 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 CAP2P40123 477 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 SOX10P56693 466 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 MAP3K12Q12852 859 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 SLC4A8Q2Y0W8 1093 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 GADL1Q6ZQY3 521 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 PRRT2Q7Z6L0 340 aaPredicted RBP6.58□□□□□ -1.36
CHD3-212ENST00000570758 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.58□□□□□ -1.36
CHD3-212ENST00000570758 CRBNQ96SW2 442 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 RIOK1Q9BRS2 568 aaKnown RBP6.58□□□□□ -1.36
CHD3-212ENST00000570758 LRRCC1Q9C099 1032 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 PI4KBQ9UBF8 816 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 PALD1Q9ULE6 856 aa6.58□□□□□ -1.36
CHD3-212ENST00000570758 ZSWIM8A7E2V4 1837 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 ZNF532Q9HCE3 1301 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 MAGEB6P1A0A0J9YX57 407 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 TRIM75PA6NK02 468 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 ECM2O94769 699 aaPredicted RBP6.57□□□□□ -1.36
CHD3-212ENST00000570758 CHGBP05060 677 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 ATP5JP18859 108 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 CTGFP29279 349 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 USP5P45974 858 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 RGS19P49795 217 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 EVX2Q03828 476 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 SPP2Q13103 211 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 TTF1Q15361 905 aaPredicted RBP6.57□□□□□ -1.36
CHD3-212ENST00000570758 SLC9C2Q5TAH2 1124 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 TSHZ3Q63HK5 1081 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 C17orf99Q6UX52 265 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 METTL16Q86W50 562 aaKnown RBP6.57□□□□□ -1.36
CHD3-212ENST00000570758 FOXP4Q8IVH2 680 aaPredicted RBP6.57□□□□□ -1.36
CHD3-212ENST00000570758 HAUS7Q99871 368 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 ARHGAP39Q9C0H5 1083 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 DHX36Q9H2U1 1008 aaKnown RBP6.57□□□□□ -1.36
CHD3-212ENST00000570758 EFCC1Q9HA90 598 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 PAG1Q9NWQ8 432 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 CPA4Q9UI42 421 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 HERC5Q9UII4 1024 aaKnown RBP6.57□□□□□ -1.36
CHD3-212ENST00000570758 PTPN22Q9Y2R2 807 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 FOCADQ5VW36 1801 aa6.57□□□□□ -1.36
CHD3-212ENST00000570758 USP17L5A8MUK1 530 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 GDF11O95390 407 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 CYP2C8P10632 490 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 ADD2P35612 726 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 LACTBP83111 547 aaPredicted RBP6.56□□□□□ -1.36
CHD3-212ENST00000570758 TREML2Q5T2D2 321 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 TMED8Q6PL24 325 aaPredicted RBP6.56□□□□□ -1.36
CHD3-212ENST00000570758 FASTKD5Q7L8L6 764 aaKnown RBP6.56□□□□□ -1.36
CHD3-212ENST00000570758 CERS3Q8IU89 383 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 LCORLQ8N3X6 602 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 CRACR2BQ8N4Y2 399 aaPredicted RBP6.56□□□□□ -1.36
CHD3-212ENST00000570758 ZNF280CQ8ND82 737 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 ARMT1Q9H993 441 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 PTPRFP10586 1907 aa6.56□□□□□ -1.36
CHD3-212ENST00000570758 ATAD5Q96QE3 1844 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 SMIM22K7EJ46 135 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 PRKAB2O43741 272 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 MBD4O95243 580 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 GH2P01242 217 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 HLA-DOAP06340 250 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 CYP2D6P10635 497 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 BCRP11274 1271 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 PLCD1P51178 756 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 HMGCS2P54868 508 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 OTUD7AQ8TE49 926 aaPredicted RBP6.55□□□□□ -1.36
CHD3-212ENST00000570758 SDR42E1Q8WUS8 393 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 TRIM47Q96LD4 638 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 PARK7Q99497 189 aaKnown RBP6.55□□□□□ -1.36
CHD3-212ENST00000570758 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 TRIM34Q9BYJ4 488 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 CRNKL1Q9BZJ0 848 aaKnown RBP6.55□□□□□ -1.36
CHD3-212ENST00000570758 ECHDC1Q9NTX5 307 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 MCM9Q9NXL9 1143 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 ZBTB21Q9ULJ3 1066 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 AGTPBP1Q9UPW5 1226 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 SLC45A1Q9Y2W3 748 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 PTCH2Q9Y6C5 1203 aa6.55□□□□□ -1.36
CHD3-212ENST00000570758 DDX60LQ5H9U9 1706 aaKnown RBP6.55□□□□□ -1.36
CHD3-212ENST00000570758 MYH1P12882 1939 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 ASNSP08243 561 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 OSBPP22059 807 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 GUCY1A2P33402 732 aa6.54□□□□□ -1.36
CHD3-212ENST00000570758 SHMT1P34896 483 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms