RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 METAP2P50579 478 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMG6-207ENST00000570756 ANTXR2P58335 489 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 TRDNQ13061 729 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 MORC3Q14149 939 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 RAD9BQ6WBX8 426 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 PACS2Q86VP3 889 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 NAPGQ99747 312 aaPredicted RBP17.54■□□□□ 0.4
SMG6-207ENST00000570756 VIPAS39Q9H9C1 493 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 MYO1AQ9UBC5 1043 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 SLIT3O75094 1523 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 NWD2Q9ULI1 1742 aa17.54■□□□□ 0.4
SMG6-207ENST00000570756 PPFIA4O75335 1185 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 FGAP02671 866 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 PLCD1P51178 756 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 TIMM10P62072 90 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 CT47A1Q5JQC4 288 aaPredicted RBP17.53■□□□□ 0.4
SMG6-207ENST00000570756 KANK3Q6NY19 840 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 FOXR1Q6PIV2 292 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 LRRC31Q6UY01 552 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 EFCAB13Q8IY85 973 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 IGSF22Q8N9C0 903 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 CCDC51Q96ER9 411 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 FAM107BQ9H098 131 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 C5P01031 1676 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 ZNF213O14771 459 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 SARSP49591 514 aaKnown RBP17.53■□□□□ 0.4
SMG6-207ENST00000570756 WASHC4Q2M389 1173 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 WDR93Q6P2C0 686 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 ATG9AQ7Z3C6 839 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 TRMT44Q8IYL2 757 aaKnown RBP17.53■□□□□ 0.4
SMG6-207ENST00000570756 TEX13AQ9BXU3 409 aaPredicted RBP17.53■□□□□ 0.4
SMG6-207ENST00000570756 FAM204AQ9H8W3 233 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 SUGCTQ9HAC7 445 aa17.53■□□□□ 0.4
SMG6-207ENST00000570756 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 FOXN1O15353 648 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 GUCY2CP25092 1073 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 MCM3P25205 808 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 WWC2Q6AWC2 1192 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 CNGA4Q8IV77 575 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 AIFM3Q96NN9 605 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 CTAGE1Q96RT6 745 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 DEF6Q9H4E7 631 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 SAMSN1Q9NSI8 373 aaKnown RBP17.52■□□□□ 0.4
SMG6-207ENST00000570756 ANGEL1Q9UNK9 670 aaKnown RBP17.52■□□□□ 0.4
SMG6-207ENST00000570756 ADAMTS7Q9UKP4 1686 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 RBL2Q08999 1139 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
SMG6-207ENST00000570756 PHACTR2O75167 634 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 SLC35F6Q8N357 371 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 AFAP1L1Q8TED9 768 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 MFAP3LO75121 409 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 AARSP49588 968 aaKnown RBP eCLIP17.51■□□□□ 0.39
SMG6-207ENST00000570756 CASP7P55210 303 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 MAP9Q49MG5 647 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 FILIP1LQ4L180 1135 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 DNAJC21Q5F1R6 531 aaKnown RBP17.51■□□□□ 0.39
SMG6-207ENST00000570756 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 CERKQ8TCT0 537 aa17.51■□□□□ 0.39
SMG6-207ENST00000570756 FOXP2O15409 715 aa17.5■□□□□ 0.39
SMG6-207ENST00000570756 CPP00450 1065 aa17.5■□□□□ 0.39
SMG6-207ENST00000570756 POLR2DO15514 142 aaKnown RBP17.5■□□□□ 0.39
SMG6-207ENST00000570756 RNF40O75150 1001 aa17.5■□□□□ 0.39
SMG6-207ENST00000570756 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
SMG6-207ENST00000570756 SLC39A6Q13433 755 aa17.5■□□□□ 0.39
SMG6-207ENST00000570756 LRRIQ3A6PVS8 624 aaPredicted RBP17.49■□□□□ 0.39
SMG6-207ENST00000570756 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 PTCD1O75127 700 aaKnown RBP17.49■□□□□ 0.39
SMG6-207ENST00000570756 ATP2B1P20020 1258 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 IARSP41252 1262 aaKnown RBP17.49■□□□□ 0.39
SMG6-207ENST00000570756 ZNF827Q17R98 1081 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 SPATA1Q5VX52 437 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 TMTC1Q8IUR5 882 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 SERTAD1Q9UHV2 236 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 WWC3Q9ULE0 1092 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 ARFGEF2Q9Y6D5 1785 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 TEX33O43247 280 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 PRR29P0C7W0 189 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
SMG6-207ENST00000570756 SLC9C2Q5TAH2 1124 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 APPBP2Q92624 585 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 ROBO1Q9Y6N7 1651 aa17.49■□□□□ 0.39
SMG6-207ENST00000570756 EYA2O00167 538 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 SEMA3EO15041 775 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 FECHP22830 423 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 PBX1P40424 430 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 FOXO4P98177 505 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
SMG6-207ENST00000570756 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 NOSTRINQ8IVI9 506 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
SMG6-207ENST00000570756 ZNF579Q8NAF0 562 aaKnown RBP17.48■□□□□ 0.39
SMG6-207ENST00000570756 PHKBQ93100 1093 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 SLC52A2Q9HAB3 445 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 MYO6Q9UM54 1294 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 A0A087WUV0 522 aaPredicted RBP17.48■□□□□ 0.39
SMG6-207ENST00000570756 PTPREP23469 700 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 SPECC1Q5M775 1068 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 STK11IPQ8N1F8 1099 aa17.48■□□□□ 0.39
SMG6-207ENST00000570756 WASF1Q92558 559 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms