RNA–Protein interactions for RNA: ENST00000570668.1

SMG6-206, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-206ENST00000570668 FAM196BA6NMK8 535 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 CETPP11597 493 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 UBE3CQ15386 1083 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 TSHZ3Q63HK5 1081 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 OTUD7AQ8TE49 926 aaPredicted RBP13.48□□□□□ -0.25
SMG6-206ENST00000570668 R3HDMLQ9H3Y0 253 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 RWDD1Q9H446 243 aaPredicted RBP13.48□□□□□ -0.25
SMG6-206ENST00000570668 PICK1Q9NRD5 415 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 PALD1Q9ULE6 856 aa13.48□□□□□ -0.25
SMG6-206ENST00000570668 SALL3Q9BXA9 1300 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 GPR25O00155 361 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 CXCL11O14625 94 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 ERC2O15083 957 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 PTPRAP18433 802 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 USP5P45974 858 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 IFFO2Q5TF58 517 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 ZSCAN25Q6NSZ9 544 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 SMC5Q8IY18 1101 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 KBTBD3Q8NAB2 608 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 PI4K2BQ8TCG2 481 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 CRNKL1Q9BZJ0 848 aaKnown RBP13.47□□□□□ -0.25
SMG6-206ENST00000570668 ZCCHC17Q9NP64 241 aaKnown RBP13.47□□□□□ -0.25
SMG6-206ENST00000570668 ZBTB47Q9UFB7 747 aaPredicted RBP13.47□□□□□ -0.25
SMG6-206ENST00000570668 SAP30BPQ9UHR5 308 aaKnown RBP13.47□□□□□ -0.25
SMG6-206ENST00000570668 SIPA1L1O43166 1804 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 MYH7P12883 1935 aa13.47□□□□□ -0.25
SMG6-206ENST00000570668 GLRX3O76003 335 aaKnown RBP13.46□□□□□ -0.25
SMG6-206ENST00000570668 HLA-DOAP06340 250 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 MX1P20591 662 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 CAP2P40123 477 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 RRP1BQ14684 758 aaKnown RBP13.46□□□□□ -0.25
SMG6-206ENST00000570668 SLFNL1Q499Z3 407 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 FAM43AQ8N2R8 423 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 LCORLQ8N3X6 602 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 ZNF296Q8WUU4 475 aaPredicted RBP13.46□□□□□ -0.25
SMG6-206ENST00000570668 DNAJC18Q9H819 358 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 MYH1P12882 1939 aa13.46□□□□□ -0.25
SMG6-206ENST00000570668 DOCK1Q14185 1865 aa13.46□□□□□ -0.26
SMG6-206ENST00000570668 BTBD19C9JJ37 291 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 IGHDP01880 384 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 CHGBP05060 677 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 CRHR2Q13324 411 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 MOGSQ13724 837 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 TTC6Q86TZ1 520 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 CRACR2BQ8N4Y2 399 aaPredicted RBP13.45□□□□□ -0.26
SMG6-206ENST00000570668 EHD4Q9H223 541 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 ARMT1Q9H993 441 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 AFG3L2Q9Y4W6 797 aa13.45□□□□□ -0.26
SMG6-206ENST00000570668 FKTNO75072 461 aa13.44□□□□□ -0.26
SMG6-206ENST00000570668 MBD4O95243 580 aa13.44□□□□□ -0.26
SMG6-206ENST00000570668 MAPK8IP2Q13387 824 aaPredicted RBP13.44□□□□□ -0.26
SMG6-206ENST00000570668 TAF1CQ15572 869 aaPredicted RBP13.44□□□□□ -0.26
SMG6-206ENST00000570668 SDR42E1Q8WUS8 393 aa13.44□□□□□ -0.26
SMG6-206ENST00000570668 TRIM34Q9BYJ4 488 aa13.44□□□□□ -0.26
SMG6-206ENST00000570668 DCP1AQ9NPI6 582 aaPredicted RBP13.44□□□□□ -0.26
SMG6-206ENST00000570668 GINM1Q9NU53 330 aa13.44□□□□□ -0.26
SMG6-206ENST00000570668 STAP2Q9UGK3 403 aa13.44□□□□□ -0.26
SMG6-206ENST00000570668 SERPINB13Q9UIV8 391 aa13.44□□□□□ -0.26
SMG6-206ENST00000570668 PHIPQ8WWQ0 1821 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 A0A0G2JLL6 359 aaPredicted RBP13.43□□□□□ -0.26
SMG6-206ENST00000570668 ZFYP08048 801 aaPredicted RBP13.43□□□□□ -0.26
SMG6-206ENST00000570668 ASNSP08243 561 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 PDE1AP54750 535 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 DGKZQ13574 1117 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 SLC4A8Q2Y0W8 1093 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 DDX60LQ5H9U9 1706 aaKnown RBP13.43□□□□□ -0.26
SMG6-206ENST00000570668 PRRT2Q7Z6L0 340 aaPredicted RBP13.43□□□□□ -0.26
SMG6-206ENST00000570668 ANKRD23Q86SG2 305 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 TBC1D2Q9BYX2 928 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 PUS7LQ9H0K6 701 aaKnown RBP13.43□□□□□ -0.26
SMG6-206ENST00000570668 ZFYVE28Q9HCC9 887 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 MCM9Q9NXL9 1143 aa13.43□□□□□ -0.26
SMG6-206ENST00000570668 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.43□□□□□ -0.26
SMG6-206ENST00000570668 ATAD5Q96QE3 1844 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 USP17L5A8MUK1 530 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 RNF113AO15541 343 aaKnown RBP13.42□□□□□ -0.26
SMG6-206ENST00000570668 PRKAB2O43741 272 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 POLR3DP05423 398 aaPredicted RBP13.42□□□□□ -0.26
SMG6-206ENST00000570668 PLCD1P51178 756 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 JAG1P78504 1218 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 GABPAQ06546 454 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 LRRFIP1Q32MZ4 808 aaKnown RBP13.42□□□□□ -0.26
SMG6-206ENST00000570668 GPAT2Q6NUI2 795 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 TATDN1Q6P1N9 297 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 FASTKD5Q7L8L6 764 aaKnown RBP13.42□□□□□ -0.26
SMG6-206ENST00000570668 CTU1Q7Z7A3 348 aaKnown RBP13.42□□□□□ -0.26
SMG6-206ENST00000570668 CCDC84Q86UT8 332 aaPredicted RBP13.42□□□□□ -0.26
SMG6-206ENST00000570668 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 APPBP2Q92624 585 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 LNPKQ9C0E8 428 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 PTPRFP10586 1907 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 NAV1Q8NEY1 1877 aa13.42□□□□□ -0.26
SMG6-206ENST00000570668 TRIM75PA6NK02 468 aa13.41□□□□□ -0.26
SMG6-206ENST00000570668 PDHXO00330 501 aa13.41□□□□□ -0.26
SMG6-206ENST00000570668 TLR2O60603 784 aa13.41□□□□□ -0.26
SMG6-206ENST00000570668 IRX6P78412 446 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms