RNA–Protein interactions for RNA: ENST00000570001.5

PDXDC1-217, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 4,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-217ENST00000570001 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 ATP8A2Q9NTI2 1148 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 PNPLA7Q6ZV29 1317 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 CYP2D7A0A087X1C5 515 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 BTBD18B2RXH4 712 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 CUTAO60888 179 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 PCP11498 1178 aaKnown RBP13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 PICALMQ13492 652 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 LY9Q9HBG7 655 aa13.37□□□□□ -0.27
PDXDC1-217ENST00000570001 STRCP1A6NGW2 1772 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 RIC1Q4ADV7 1423 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 A0A1W2PQ27 194 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 A0A1W2PQ64 194 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 A0A1W2PQD8 194 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 FMNL1O95466 1100 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 IFNAR1P17181 557 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 PTGS1P23219 599 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 NDUFA8P51970 172 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 VPS54Q9P1Q0 977 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 AFF2P51816 1311 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 COL18A1P39060 1754 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 PFKFB1P16118 471 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 TGFBRAP1Q8WUH2 860 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 VAT1LQ9HCJ6 419 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 KCNH3Q9ULD8 1083 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 FILIP1LQ4L180 1135 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 KLHL10Q6JEL2 608 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 CRACR2BQ8N4Y2 399 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 PKD1L3Q7Z443 1732 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 OFD1O75665 1012 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 TFAP4Q01664 338 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 GRAPQ13588 217 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 MAPKAPK5Q8IW41 473 aa13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 GRAPLQ8TC17 118 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 EPB41L4AQ9HCS5 686 aaPredicted RBP13.36□□□□□ -0.27
PDXDC1-217ENST00000570001 SERPINB2P05120 415 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 CMA1P23946 247 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 CALML3P27482 149 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 SPECC1Q5M775 1068 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 HEATR3Q7Z4Q2 680 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 NEMFO60524 1076 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 PRDX5P30044 214 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 CDC27P30260 824 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 SLC39A14Q15043 492 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 CCDC12Q8WUD4 166 aaPredicted RBP13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 AGXT2Q9BYV1 514 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 COL14A1Q05707 1796 aaKnown RBP13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 TRIM37O94972 964 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 ATP2B4P23634 1241 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 TMC6Q7Z403 805 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
PDXDC1-217ENST00000570001 SGMS1Q86VZ5 419 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 PDLIM2Q96JY6 352 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 BRIP1Q9BX63 1249 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 KIAA1468Q9P260 1216 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 GSDMDP57764 484 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 TSR1Q2NL82 804 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 SPATA31A6Q5VVP1 1343 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 CERS3Q8IU89 383 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 CDK5RAP3Q96JB5 506 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 ZNF75DP51815 510 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 MFSD14BQ5SR56 506 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 DHX58Q96C10 678 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 FDPSP14324 419 aaKnown RBP13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 AFMP43652 599 aa13.34□□□□□ -0.27
PDXDC1-217ENST00000570001 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.33□□□□□ -0.27
PDXDC1-217ENST00000570001 HLA-DOAP06340 250 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 ZNF174Q15697 407 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 IGDCC4Q8TDY8 1250 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 DISP2A7MBM2 1401 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 RNF26Q9BY78 433 aaPredicted RBP13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 DDAH1O94760 285 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 NFIXQ14938 502 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 CCDC96Q2M329 555 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 TBC1D22AQ8WUA7 517 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
PDXDC1-217ENST00000570001 C16orf45Q96MC5 204 aaPredicted RBP13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 CLIC6Q96NY7 704 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 POLR2DO15514 142 aaKnown RBP13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 TOP1P11387 765 aaKnown RBP13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 MCM7P33993 719 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 STIM1Q13586 685 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 MMP1P03956 469 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 PIK3AP1Q6ZUJ8 805 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 KRT27Q7Z3Y8 459 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 PYM1Q9BRP8 204 aaKnown RBP13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 TCRBV5S4A2TA0A5A2 114 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 CCP110O43303 1012 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 ADRA2BP18089 450 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 UBASH3AP57075 661 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 NLRP12P59046 1061 aa13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 PCMTD1Q96MG8 357 aaPredicted RBP13.32□□□□□ -0.28
PDXDC1-217ENST00000570001 FOXP1Q9H334 677 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms