RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 ITGA6P23229 1130 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 FGD1P98174 961 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 TNP2Q05952 138 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 Q6ZNB5 142 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 USHBP1Q8N6Y0 703 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 DUSP9Q99956 384 aaKnown RBP8.28□□□□□ -1.08
UBFD1-209ENST00000569919 TMEM63CQ9P1W3 806 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 FOXD3Q9UJU5 478 aaPredicted RBP8.28□□□□□ -1.08
UBFD1-209ENST00000569919 SPG7Q9UQ90 795 aa8.28□□□□□ -1.08
UBFD1-209ENST00000569919 BNIP3LO60238 219 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 MAPTP10636 758 aaKnown RBP8.27□□□□□ -1.09
UBFD1-209ENST00000569919 VEGFAP15692 232 aaPredicted RBP8.27□□□□□ -1.09
UBFD1-209ENST00000569919 DALRD3Q5D0E6 543 aaKnown RBP8.27□□□□□ -1.09
UBFD1-209ENST00000569919 ALG1LQ6GMV1 187 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 DNAJC25Q9H1X3 360 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 RNF19AQ9NV58 838 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 NDFIP2Q9NV92 336 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 TMOD3Q9NYL9 352 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 RNF181Q9P0P0 153 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 PARP2Q9UGN5 583 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 C10orf71Q711Q0 1435 aa8.27□□□□□ -1.09
UBFD1-209ENST00000569919 SMG6Q86US8 1419 aaKnown RBP8.27□□□□□ -1.09
UBFD1-209ENST00000569919 A0A1W2PP64 1363 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 RTL1A6NKG5 1358 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 UBR3Q6ZT12 1888 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 CPNE3O75131 537 aaKnown RBP8.26□□□□□ -1.09
UBFD1-209ENST00000569919 RFC4P35249 363 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 SNX29Q8TEQ0 813 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 ZNF837Q96EG3 531 aaPredicted RBP8.26□□□□□ -1.09
UBFD1-209ENST00000569919 GMCL1Q96IK5 515 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 DCAF5Q96JK2 942 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 CFHR5Q9BXR6 569 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 BCL11AQ9H165 835 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 HCN2Q9UL51 889 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 ASAP1Q9ULH1 1129 aa8.26□□□□□ -1.09
UBFD1-209ENST00000569919 LCE2BO14633 110 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 PHACTR2O75167 634 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 RPS6KA4O75676 772 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 SASH3O75995 380 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 VAMP1P23763 118 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 ITPK1Q13572 414 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 LAMC2Q13753 1193 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 CCINQ13939 588 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 RRS1Q15050 365 aaKnown RBP8.25□□□□□ -1.09
UBFD1-209ENST00000569919 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 GTPBP3Q969Y2 492 aaKnown RBP8.25□□□□□ -1.09
UBFD1-209ENST00000569919 ABHD17AQ96GS6 310 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 FAM161BQ96MY7 647 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 CARD11Q9BXL7 1154 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 GSX2Q9BZM3 304 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 ZFYVE28Q9HCC9 887 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 ABI2Q9NYB9 513 aaPredicted RBP8.25□□□□□ -1.09
UBFD1-209ENST00000569919 RGPD2P0DJD1 1756 aa8.25□□□□□ -1.09
UBFD1-209ENST00000569919 KIF13BQ9NQT8 1826 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 KCPQ6ZWJ8 1503 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 INSRP06213 1382 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 GLTPD2A6NH11 291 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 FYB1O15117 783 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 GYS1P13807 737 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 TARSP26639 723 aaKnown RBP8.24□□□□□ -1.09
UBFD1-209ENST00000569919 GRIN2CQ14957 1233 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 HSP90AB2PQ58FF8 381 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 KRT25Q7Z3Z0 450 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 FBF1Q8TES7 1133 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 ATG3Q9NT62 314 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 MARK1Q9P0L2 795 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 CNTN3Q9P232 1028 aa8.24□□□□□ -1.09
UBFD1-209ENST00000569919 N4BP2Q86UW6 1770 aaPredicted RBP8.24□□□□□ -1.09
UBFD1-209ENST00000569919 PPFIA3O75145 1194 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 DAB2P98082 770 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 TTC39BQ5VTQ0 682 aaPredicted RBP8.23□□□□□ -1.09
UBFD1-209ENST00000569919 TMC4Q7Z404 712 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 IFNL2Q8IZJ0 200 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 CCDC74AQ96AQ1 378 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 SIN3AQ96ST3 1273 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 CHRDQ9H2X0 955 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 PRDM10Q9NQV6 1147 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 TOGARAM1Q9Y4F4 1720 aa8.23□□□□□ -1.09
UBFD1-209ENST00000569919 KIF24Q5T7B8 1368 aa8.22□□□□□ -1.09
UBFD1-209ENST00000569919 ITGB4P16144 1822 aa8.22□□□□□ -1.09
UBFD1-209ENST00000569919 CD33P20138 364 aa8.22□□□□□ -1.09
UBFD1-209ENST00000569919 LMNB1P20700 586 aa8.22□□□□□ -1.09
UBFD1-209ENST00000569919 PSMD2Q13200 908 aa8.22□□□□□ -1.09
UBFD1-209ENST00000569919 MRPL58Q14197 206 aaKnown RBP8.22□□□□□ -1.09
UBFD1-209ENST00000569919 MRS2Q9HD23 443 aa8.22□□□□□ -1.09
UBFD1-209ENST00000569919 ATXN7L1Q9ULK2 861 aaPredicted RBP8.22□□□□□ -1.09
UBFD1-209ENST00000569919 CDC14CA4D256 554 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 POTECB2RU33 542 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 ERVV-2B6SEH9 535 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 EREGO14944 169 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 MMP20O60882 483 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 POLR3DP05423 398 aaPredicted RBP8.21□□□□□ -1.1
UBFD1-209ENST00000569919 GNA15P30679 374 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 SPEM2Q0P670 501 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 VWA5B2Q8N398 1253 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 PNMA5Q96PV4 448 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 SLC30A3Q99726 388 aa8.21□□□□□ -1.1
UBFD1-209ENST00000569919 ZFATQ9P243 1243 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms