RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RBM8AQ9Y5S9 174 aaKnown RBP27.89■■■□□ 2.06
RAB40C-212ENST00000569575 UNCXA6NJT0 531 aa27.88■■■□□ 2.05
RAB40C-212ENST00000569575 PDE4BQ07343 736 aa27.88■■■□□ 2.05
RAB40C-212ENST00000569575 TRIM34Q9BYJ4 488 aa27.88■■■□□ 2.05
RAB40C-212ENST00000569575 SAP30BPQ9UHR5 308 aaKnown RBP27.88■■■□□ 2.05
RAB40C-212ENST00000569575 MINDY4BA8MYZ0 360 aa27.87■■■□□ 2.05
RAB40C-212ENST00000569575 ZKSCAN1P17029 563 aaPredicted RBP27.87■■■□□ 2.05
RAB40C-212ENST00000569575 FKBP1BP68106 108 aa27.87■■■□□ 2.05
RAB40C-212ENST00000569575 TSGA10IPQ3SY00 556 aa27.87■■■□□ 2.05
RAB40C-212ENST00000569575 CRACR2BQ8N4Y2 399 aaPredicted RBP27.87■■■□□ 2.05
RAB40C-212ENST00000569575 GLIS2Q9BZE0 524 aaPredicted RBP27.87■■■□□ 2.05
RAB40C-212ENST00000569575 PPP1R12BO60237 982 aaPredicted RBP27.86■■■□□ 2.05
RAB40C-212ENST00000569575 ITGBL1O95965 494 aaPredicted RBP27.86■■■□□ 2.05
RAB40C-212ENST00000569575 FGRP09769 529 aa27.86■■■□□ 2.05
RAB40C-212ENST00000569575 HSPA4P34932 840 aa27.86■■■□□ 2.05
RAB40C-212ENST00000569575 GABPAQ06546 454 aa27.86■■■□□ 2.05
RAB40C-212ENST00000569575 CDCA5Q96FF9 252 aa27.86■■■□□ 2.05
RAB40C-212ENST00000569575 GINM1Q9NU53 330 aa27.86■■■□□ 2.05
RAB40C-212ENST00000569575 LAMB1P07942 1786 aa27.86■■■□□ 2.05
RAB40C-212ENST00000569575 ADM5C9JUS6 153 aa27.85■■■□□ 2.05
RAB40C-212ENST00000569575 PLCD1P51178 756 aa27.85■■■□□ 2.05
RAB40C-212ENST00000569575 C16orf86Q6ZW13 317 aa27.85■■■□□ 2.05
RAB40C-212ENST00000569575 KCNB2Q92953 911 aa27.85■■■□□ 2.05
RAB40C-212ENST00000569575 LAMA4Q16363 1823 aa27.85■■■□□ 2.05
RAB40C-212ENST00000569575 KRT32Q14532 448 aa27.84■■■□□ 2.05
RAB40C-212ENST00000569575 NBPF12Q5TAG4 269 aaPredicted RBP27.84■■■□□ 2.05
RAB40C-212ENST00000569575 CCDC17Q96LX7 622 aa27.84■■■□□ 2.05
RAB40C-212ENST00000569575 ZNF341Q9BYN7 854 aa27.84■■■□□ 2.05
RAB40C-212ENST00000569575 CNNM2Q9H8M5 875 aa27.84■■■□□ 2.05
RAB40C-212ENST00000569575 ANAPC15P60006 121 aa27.83■■■□□ 2.05
RAB40C-212ENST00000569575 AKNAD1Q5T1N1 836 aa27.83■■■□□ 2.05
RAB40C-212ENST00000569575 MFSD6Q6ZSS7 791 aa27.83■■■□□ 2.05
RAB40C-212ENST00000569575 IL27Q8NEV9 243 aa27.83■■■□□ 2.05
RAB40C-212ENST00000569575 STAG1Q8WVM7 1258 aa27.83■■■□□ 2.05
RAB40C-212ENST00000569575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP27.83■■■□□ 2.05
RAB40C-212ENST00000569575 ORC4O43929 436 aa27.82■■■□□ 2.04
RAB40C-212ENST00000569575 CYP21A2P08686 494 aa27.82■■■□□ 2.04
RAB40C-212ENST00000569575 MAP3K11Q16584 847 aa27.82■■■□□ 2.04
RAB40C-212ENST00000569575 CREB3L3Q68CJ9 461 aa27.82■■■□□ 2.04
RAB40C-212ENST00000569575 TATDN1Q6P1N9 297 aa27.82■■■□□ 2.04
RAB40C-212ENST00000569575 SLC27A2O14975 620 aa27.81■■■□□ 2.04
RAB40C-212ENST00000569575 TRDNQ13061 729 aa27.81■■■□□ 2.04
RAB40C-212ENST00000569575 KRT23Q9C075 422 aa27.81■■■□□ 2.04
RAB40C-212ENST00000569575 IREB2P48200 963 aaKnown RBP27.8■■■□□ 2.04
RAB40C-212ENST00000569575 CDK8P49336 464 aa27.8■■■□□ 2.04
RAB40C-212ENST00000569575 ARMC9Q7Z3E5 817 aa27.8■■■□□ 2.04
RAB40C-212ENST00000569575 MKNK2Q9HBH9 465 aa27.8■■■□□ 2.04
RAB40C-212ENST00000569575 ZNF112Q9UJU3 913 aa27.8■■■□□ 2.04
RAB40C-212ENST00000569575 PASKQ96RG2 1323 aa27.79■■■□□ 2.04
RAB40C-212ENST00000569575 CYP2D6P10635 497 aa27.79■■■□□ 2.04
RAB40C-212ENST00000569575 CYP2D7A0A087X1C5 515 aa27.78■■■□□ 2.04
RAB40C-212ENST00000569575 CTNND1O60716 968 aaKnown RBP27.78■■■□□ 2.04
RAB40C-212ENST00000569575 SEC24BO95487 1268 aa27.78■■■□□ 2.04
RAB40C-212ENST00000569575 PPP4R3BQ5MIZ7 849 aa27.78■■■□□ 2.04
RAB40C-212ENST00000569575 ZNF444Q8N0Y2 327 aaPredicted RBP27.78■■■□□ 2.04
RAB40C-212ENST00000569575 IL17RAQ96F46 866 aa27.78■■■□□ 2.04
RAB40C-212ENST00000569575 SCAF8Q9UPN6 1271 aaKnown RBP27.78■■■□□ 2.04
RAB40C-212ENST00000569575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.78■■■□□ 2.044e-6■■■□□ 15.8
RAB40C-212ENST00000569575 TRPM7Q96QT4 1865 aa27.78■■■□□ 2.04
RAB40C-212ENST00000569575 SIPA1L1O43166 1804 aa27.78■■■□□ 2.04
RAB40C-212ENST00000569575 HMGB1P09429 215 aaKnown RBP27.77■■■□□ 2.04
RAB40C-212ENST00000569575 C2orf69Q8N8R5 385 aa27.77■■■□□ 2.04
RAB40C-212ENST00000569575 KLRG1Q96E93 195 aa27.77■■■□□ 2.04
RAB40C-212ENST00000569575 PSMA5P28066 241 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 HAND2P61296 217 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 CTDSPL2Q05D32 466 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 CERKLQ49MI3 558 aaPredicted RBP27.76■■■□□ 2.03
RAB40C-212ENST00000569575 PRAMEF18Q5VWM3 479 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 MIGA2Q7L4E1 593 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 NCOA7Q8NI08 942 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 ESR2Q92731 530 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 MTA3Q9BTC8 594 aa27.76■■■□□ 2.03
RAB40C-212ENST00000569575 PHF20L1A8MW92 1017 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 USP2O75604 605 aaPredicted RBP27.75■■■□□ 2.03
RAB40C-212ENST00000569575 SHMT1P34896 483 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 RBM25P49756 843 aaKnown RBP27.75■■■□□ 2.03
RAB40C-212ENST00000569575 CCDC178Q5BJE1 867 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 CDAN1Q8IWY9 1227 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 DYNLL2Q96FJ2 89 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 NBPF3Q9H094 633 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 DNAJC18Q9H819 358 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 GBA2Q9HCG7 927 aaPredicted RBP27.75■■■□□ 2.03
RAB40C-212ENST00000569575 PAPPA2Q9BXP8 1791 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 MYH8P13535 1937 aa27.75■■■□□ 2.03
RAB40C-212ENST00000569575 SSC5DA1L4H1 1573 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 E7EWF7 191 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 TRAF5O00463 557 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 CAP2P40123 477 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 MAP3K9P80192 1104 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 RALYLQ86SE5 291 aaKnown RBP27.74■■■□□ 2.03
RAB40C-212ENST00000569575 ANKRD13AQ8IZ07 590 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 TBC1D2Q9BYX2 928 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 C22orf23Q9BZE7 217 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 TM6SF1Q9BZW5 370 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 CABP5Q9NP86 173 aa27.74■■■□□ 2.03
RAB40C-212ENST00000569575 CELF2O95319 508 aaKnown RBP27.73■■■□□ 2.03
RAB40C-212ENST00000569575 ASNSP08243 561 aa27.73■■■□□ 2.03
RAB40C-212ENST00000569575 SLC4A8Q2Y0W8 1093 aa27.73■■■□□ 2.03
RAB40C-212ENST00000569575 NOL9Q5SY16 702 aaKnown RBP27.73■■■□□ 2.03
RAB40C-212ENST00000569575 TBC1D10CQ8IV04 446 aa27.73■■■□□ 2.03
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