RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 CLSPNQ9HAW4 1339 aa7.69□□□□□ -1.18
CDH13-212ENST00000569144 PSME4Q14997 1843 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 A0A1W2PPC1 479 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 NEFMP07197 916 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 FSHRP23945 695 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 NNTQ13423 1086 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 DACT2Q5SW24 774 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 ISCA1Q9BUE6 129 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 TSPYL4Q9UJ04 414 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 MAP4K5Q9Y4K4 846 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 PCDHB9Q9Y5E1 797 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 LAMB1P07942 1786 aa7.68□□□□□ -1.18
CDH13-212ENST00000569144 IRS4O14654 1257 aaPredicted RBP7.67□□□□□ -1.18
CDH13-212ENST00000569144 RAD21O60216 631 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 PPP1R12BO60237 982 aaPredicted RBP7.67□□□□□ -1.18
CDH13-212ENST00000569144 SASH1O94885 1247 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 AVPP01185 164 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 ATP2B4P23634 1241 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 GRM5P41594 1212 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 PLBD2Q8NHP8 589 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 DPF3Q92784 378 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 ZNF428Q96B54 188 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 CLMNQ96JQ2 1002 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 SEC31BQ9NQW1 1179 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 CDV3Q9UKY7 258 aaKnown RBP7.67□□□□□ -1.18
CDH13-212ENST00000569144 FZD1Q9UP38 647 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 XDHP47989 1333 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 MED23Q9ULK4 1368 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 SSC5DA1L4H1 1573 aa7.67□□□□□ -1.18
CDH13-212ENST00000569144 KIAA0100Q14667 2235 aaKnown RBP7.66□□□□□ -1.18
CDH13-212ENST00000569144 TRIOBPQ9H2D6 2365 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
CDH13-212ENST00000569144 NR5A1Q13285 461 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 NFE2L2Q16236 605 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 STRIP1Q5VSL9 837 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 TRAF7Q6Q0C0 670 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 SHISA4Q96DD7 197 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 ZBED3Q96IU2 234 aaPredicted RBP7.66□□□□□ -1.18
CDH13-212ENST00000569144 KCTD15Q96SI1 283 aaPredicted RBP7.66□□□□□ -1.18
CDH13-212ENST00000569144 PTPN18Q99952 460 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 MXD3Q9BW11 206 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 DEFB129Q9H1M3 183 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 BABAM1Q9NWV8 329 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 PPP2R3BQ9Y5P8 575 aa7.66□□□□□ -1.18
CDH13-212ENST00000569144 COL6A3P12111 3177 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 WTIPA6NIX2 430 aaPredicted RBP7.65□□□□□ -1.18
CDH13-212ENST00000569144 ATP5J2-PTCD1G3V325 749 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 LCE2BO14633 110 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 ST8SIA5O15466 376 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 MYCP01106 439 aaPredicted RBP7.65□□□□□ -1.18
CDH13-212ENST00000569144 PPP2R1AP30153 589 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 IREB2P48200 963 aaKnown RBP7.65□□□□□ -1.18
CDH13-212ENST00000569144 VAC14Q08AM6 782 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 TRIM26Q12899 539 aaPredicted RBP7.65□□□□□ -1.18
CDH13-212ENST00000569144 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
CDH13-212ENST00000569144 NBPF20Q3BBV1 942 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 CCDC152Q4G0S7 254 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 SH3TC2Q8TF17 1288 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 PLEKHF1Q96S99 279 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 HTATIP2Q9BUP3 242 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 GTF3C3Q9Y5Q9 886 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 NR2E3Q9Y5X4 410 aa7.65□□□□□ -1.18
CDH13-212ENST00000569144 RANBP2P49792 3224 aaKnown RBP7.65□□□□□ -1.19
CDH13-212ENST00000569144 DLG5Q8TDM6 1919 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 SOX1O00570 391 aaPredicted RBP7.64□□□□□ -1.19
CDH13-212ENST00000569144 ZBTB7BO15156 539 aaPredicted RBP7.64□□□□□ -1.19
CDH13-212ENST00000569144 NR3C2P08235 984 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 PRMT2P55345 433 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 SUPT20HL1Q3ZLR7 823 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 UBE2Q1Q7Z7E8 422 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 ANKRD18AQ8IVF6 992 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 ANKRD13AQ8IZ07 590 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 ZBTB38Q8NAP3 1195 aaPredicted RBP7.64□□□□□ -1.19
CDH13-212ENST00000569144 CLUAP1Q96AJ1 413 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 COA1Q9GZY4 146 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 ZFYVE28Q9HCC9 887 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 CHPF2Q9P2E5 772 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 A0A0C4DFX4 3053 aa7.64□□□□□ -1.19
CDH13-212ENST00000569144 ZNF646O15015 1829 aaPredicted RBP7.64□□□□□ -1.19
CDH13-212ENST00000569144 ZNF804BA4D1E1 1349 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 AXIN1O15169 862 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 USP2O75604 605 aaPredicted RBP7.63□□□□□ -1.19
CDH13-212ENST00000569144 GNRH1P01148 92 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 WDR4P57081 412 aaKnown RBP7.63□□□□□ -1.19
CDH13-212ENST00000569144 RAB15P59190 212 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 KIF22Q14807 665 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 TAF1CQ15572 869 aaPredicted RBP7.63□□□□□ -1.19
CDH13-212ENST00000569144 CTC1Q2NKJ3 1217 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 KIAA0825Q8IV33 1275 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 WWC1Q8IX03 1113 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 AAASQ9NRG9 546 aa7.63□□□□□ -1.19
CDH13-212ENST00000569144 MAPK8IP3Q9UPT6 1336 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 PDE8AO60658 829 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 GJA8P48165 433 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 CCT4P50991 539 aaKnown RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 MCCD1P59942 119 aaPredicted RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 LACTBP83111 547 aaPredicted RBP7.62□□□□□ -1.19
CDH13-212ENST00000569144 MTFR1Q15390 333 aa7.62□□□□□ -1.19
CDH13-212ENST00000569144 DLGAP5Q15398 846 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms